RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 SMAD5-AS1Q9Y6J3 95 aa8□□□□□ -1.13
CAPN3-203ENST00000349748 A0A0J9YXY3 114 aa7.99□□□□□ -1.13
CAPN3-203ENST00000349748 CCL8P80075 99 aa7.99□□□□□ -1.13
CAPN3-203ENST00000349748 ZNF415Q09FC8 603 aa7.99□□□□□ -1.13
CAPN3-203ENST00000349748 ADAMTSL4-AS1Q5T5F5 129 aa7.99□□□□□ -1.13
CAPN3-203ENST00000349748 WNK2Q9Y3S1 2297 aa7.99□□□□□ -1.13
CAPN3-203ENST00000349748 DAZ2Q13117 558 aaKnown RBP7.99□□□□□ -1.13
CAPN3-203ENST00000349748 FHL2Q14192 279 aa7.99□□□□□ -1.13
CAPN3-203ENST00000349748 IGFL2Q6UWQ7 119 aa7.99□□□□□ -1.13
CAPN3-203ENST00000349748 DAZ4Q86SG3 579 aaKnown RBP7.99□□□□□ -1.13
CAPN3-203ENST00000349748 DAZ1Q9NQZ3 744 aaKnown RBP7.99□□□□□ -1.13
CAPN3-203ENST00000349748 DAZ3Q9NR90 486 aaKnown RBP7.99□□□□□ -1.13
CAPN3-203ENST00000349748 NACAE9PAV3 2078 aa7.98□□□□□ -1.13
CAPN3-203ENST00000349748 IGHV3-35A0A0C4DH35 117 aa7.98□□□□□ -1.13
CAPN3-203ENST00000349748 A0A0U1RQV1 116 aa7.98□□□□□ -1.13
CAPN3-203ENST00000349748 LY6LH3BQJ8 138 aa7.98□□□□□ -1.13
CAPN3-203ENST00000349748 LEPROTO15243 131 aa7.98□□□□□ -1.13
CAPN3-203ENST00000349748 IGHV3-23P01764 117 aa7.98□□□□□ -1.13
CAPN3-203ENST00000349748 LOXP28300 417 aaPredicted RBP7.98□□□□□ -1.13
CAPN3-203ENST00000349748 SYNJ2BPP57105 145 aa7.98□□□□□ -1.13
CAPN3-203ENST00000349748 TIRAPP58753 221 aa7.98□□□□□ -1.13
CAPN3-203ENST00000349748 CIRBPQ14011 172 aaKnown RBP7.98□□□□□ -1.13
CAPN3-203ENST00000349748 ZNF876PQ49A33 203 aa7.98□□□□□ -1.13
CAPN3-203ENST00000349748 FAM223AQ8IWN6 122 aa7.98□□□□□ -1.13
CAPN3-203ENST00000349748 ROS1P08922 2347 aa7.97□□□□□ -1.13
CAPN3-203ENST00000349748 C9orf106Q8NAJ2 232 aa7.97□□□□□ -1.13
CAPN3-203ENST00000349748 V9GYY9 64 aa7.97□□□□□ -1.13
CAPN3-203ENST00000349748 IGHV1-18A0A0C4DH31 117 aa7.97□□□□□ -1.13
CAPN3-203ENST00000349748 M0R1W7 72 aa7.97□□□□□ -1.13
CAPN3-203ENST00000349748 AVPP01185 164 aa7.97□□□□□ -1.13
CAPN3-203ENST00000349748 GFRALQ6UXV0 394 aa7.97□□□□□ -1.13
CAPN3-203ENST00000349748 C9orf85Q96MD7 179 aa7.97□□□□□ -1.13
CAPN3-203ENST00000349748 LITAFQ99732 161 aa7.97□□□□□ -1.13
CAPN3-203ENST00000349748 RNF7Q9UBF6 113 aa7.97□□□□□ -1.13
CAPN3-203ENST00000349748 ITPR1Q14643 2758 aa7.97□□□□□ -1.13
CAPN3-203ENST00000349748 IGHV4-4A0A075B6R2 117 aa7.95□□□□□ -1.14
CAPN3-203ENST00000349748 TMEM200BQ69YZ2 307 aa7.95□□□□□ -1.14
CAPN3-203ENST00000349748 IGFL3Q6UXB1 125 aa7.95□□□□□ -1.14
CAPN3-203ENST00000349748 DKK4Q9UBT3 224 aa7.95□□□□□ -1.14
CAPN3-203ENST00000349748 ADGRG4Q8IZF6 3080 aa7.95□□□□□ -1.14
CAPN3-203ENST00000349748 PCNX1Q96RV3 2341 aa7.95□□□□□ -1.14
CAPN3-203ENST00000349748 GPHB5Q86YW7 130 aa7.95□□□□□ -1.14
CAPN3-203ENST00000349748 DAND5Q8N907 189 aa7.95□□□□□ -1.14
CAPN3-203ENST00000349748 RELNP78509 3460 aa7.95□□□□□ -1.14
CAPN3-203ENST00000349748 RAI1Q7Z5J4 1906 aaPredicted RBP7.95□□□□□ -1.14
CAPN3-203ENST00000349748 PRRC2AP48634 2157 aaKnown RBP7.95□□□□□ -1.14
CAPN3-203ENST00000349748 IGHV3OR16-10A0A075B7F0 116 aa7.95□□□□□ -1.14
CAPN3-203ENST00000349748 IGHV3-66A0A0C4DH42 116 aa7.95□□□□□ -1.14
CAPN3-203ENST00000349748 NXPH4O95158 308 aa7.95□□□□□ -1.14
CAPN3-203ENST00000349748 IGLV1-44P01699 117 aa7.95□□□□□ -1.14
CAPN3-203ENST00000349748 C9orf139Q6ZV77 190 aa7.95□□□□□ -1.14
CAPN3-203ENST00000349748 USP17L23D6RBM5 183 aa7.94□□□□□ -1.14
CAPN3-203ENST00000349748 TMEM61Q8N0U2 210 aa7.94□□□□□ -1.14
CAPN3-203ENST00000349748 LINC01561Q8N1V8 128 aa7.94□□□□□ -1.14
CAPN3-203ENST00000349748 FAM223BA6NKX1 122 aa7.94□□□□□ -1.14
CAPN3-203ENST00000349748 IGF1P05019 195 aa7.94□□□□□ -1.14
CAPN3-203ENST00000349748 MALRD1Q5VYJ5 2156 aa7.93□□□□□ -1.14
CAPN3-203ENST00000349748 IGHV3OR16-13A0A075B7E8 117 aa7.93□□□□□ -1.14
CAPN3-203ENST00000349748 IGHV3-74A0A0B4J1X5 117 aa7.93□□□□□ -1.14
CAPN3-203ENST00000349748 A0A0J9YXV3 536 aa7.93□□□□□ -1.14
CAPN3-203ENST00000349748 NDPQ00604 133 aa7.93□□□□□ -1.14
CAPN3-203ENST00000349748 PRR9Q5T870 116 aa7.93□□□□□ -1.14
CAPN3-203ENST00000349748 Q8NA96 180 aa7.93□□□□□ -1.14
CAPN3-203ENST00000349748 C22orf24Q9Y442 160 aa7.93□□□□□ -1.14
CAPN3-203ENST00000349748 IGHV1-69DA0A0B4J2H0 117 aa7.93□□□□□ -1.14
CAPN3-203ENST00000349748 A8MZ25 164 aa7.93□□□□□ -1.14
CAPN3-203ENST00000349748 PRORYQ9H606 182 aa7.93□□□□□ -1.14
CAPN3-203ENST00000349748 SDHAF1A6NFY7 115 aa7.92□□□□□ -1.14
CAPN3-203ENST00000349748 BAALC-AS2P0C853 105 aa7.92□□□□□ -1.14
CAPN3-203ENST00000349748 CDSNQ15517 529 aa7.92□□□□□ -1.14
CAPN3-203ENST00000349748 TMEM30BQ3MIR4 351 aa7.92□□□□□ -1.14
CAPN3-203ENST00000349748 TMEM141Q96I45 108 aa7.92□□□□□ -1.14
CAPN3-203ENST00000349748 IGHV3-30-3P0DP02 117 aa7.92□□□□□ -1.14
CAPN3-203ENST00000349748 C16orf92Q96LL3 132 aa7.92□□□□□ -1.14
CAPN3-203ENST00000349748 DYNLRB1Q9NP97 96 aa7.92□□□□□ -1.14
CAPN3-203ENST00000349748 S100A4P26447 101 aaKnown RBP7.92□□□□□ -1.14
CAPN3-203ENST00000349748 C1orf195Q5TG92 126 aa7.92□□□□□ -1.14
CAPN3-203ENST00000349748 C9orf47Q6ZRZ4 202 aa7.92□□□□□ -1.14
CAPN3-203ENST00000349748 TIMM17AQ99595 171 aa7.92□□□□□ -1.14
CAPN3-203ENST00000349748 TMEM243Q9BU79 118 aa7.91□□□□□ -1.14
CAPN3-203ENST00000349748 PHLDA3Q9Y5J5 127 aa7.91□□□□□ -1.14
CAPN3-203ENST00000349748 BSNQ9UPA5 3926 aa7.91□□□□□ -1.14
CAPN3-203ENST00000349748 F8W735 103 aaPredicted RBP7.91□□□□□ -1.14
CAPN3-203ENST00000349748 SVEP1Q4LDE5 3571 aa7.91□□□□□ -1.14
CAPN3-203ENST00000349748 A0A0J9YX75 114 aa7.9□□□□□ -1.14
CAPN3-203ENST00000349748 BRK1Q8WUW1 75 aa7.9□□□□□ -1.14
CAPN3-203ENST00000349748 C16orf95Q9H693 158 aa7.9□□□□□ -1.14
CAPN3-203ENST00000349748 SLC25A15Q9Y619 301 aa7.9□□□□□ -1.14
CAPN3-203ENST00000349748 IGSF10Q6WRI0 2623 aa7.9□□□□□ -1.14
CAPN3-203ENST00000349748 MIAQ16674 131 aa7.9□□□□□ -1.15
CAPN3-203ENST00000349748 M0R1B8 84 aa7.89□□□□□ -1.15
CAPN3-203ENST00000349748 PKDREJQ9NTG1 2253 aa7.89□□□□□ -1.15
CAPN3-203ENST00000349748 IGHV3-49A0A0A0MS15 119 aa7.89□□□□□ -1.15
CAPN3-203ENST00000349748 BUB1B-PAK6H3BSN5 160 aa7.89□□□□□ -1.15
CAPN3-203ENST00000349748 HILS1P60008 231 aa7.89□□□□□ -1.15
CAPN3-203ENST00000349748 SEM1Q6ZVN7 128 aa7.89□□□□□ -1.15
CAPN3-203ENST00000349748 C20orf197Q8N268 126 aa7.89□□□□□ -1.15
CAPN3-203ENST00000349748 Q9HAA7 133 aa7.89□□□□□ -1.15
CAPN3-203ENST00000349748 FP248Q71RG6 208 aaPredicted RBP7.89□□□□□ -1.15
CAPN3-203ENST00000349748 Q8N2B8 174 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms