RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 Q6ZQT7 251 aa5.78□□□□□ -1.48
UBE2D3-204ENST00000349311 ADGRG4Q8IZF6 3080 aa5.78□□□□□ -1.48
UBE2D3-204ENST00000349311 FAM216BQ8N7L0 139 aa5.78□□□□□ -1.48
UBE2D3-204ENST00000349311 RNASE6Q93091 150 aaKnown RBP5.78□□□□□ -1.48
UBE2D3-204ENST00000349311 C21orf62Q9NYP8 219 aa5.78□□□□□ -1.48
UBE2D3-204ENST00000349311 IGKV2D-30A0A075B6S6 120 aa5.77□□□□□ -1.49
UBE2D3-204ENST00000349311 IGLV5-52A0A0A0MRZ9 124 aa5.77□□□□□ -1.49
UBE2D3-204ENST00000349311 TRAV25A0A0B4J276 109 aa5.77□□□□□ -1.49
UBE2D3-204ENST00000349311 TRBV30A0A0K0K1B3 111 aa5.77□□□□□ -1.49
UBE2D3-204ENST00000349311 C11orf86A6NJI1 115 aa5.77□□□□□ -1.49
UBE2D3-204ENST00000349311 M0R1B8 84 aa5.77□□□□□ -1.49
UBE2D3-204ENST00000349311 CCL21O00585 134 aa5.77□□□□□ -1.49
UBE2D3-204ENST00000349311 GAS8-AS1O95177 125 aa5.77□□□□□ -1.49
UBE2D3-204ENST00000349311 TGFAP01135 160 aa5.77□□□□□ -1.49
UBE2D3-204ENST00000349311 PLA2G2AP14555 144 aa5.77□□□□□ -1.49
UBE2D3-204ENST00000349311 LGALS3P17931 250 aaKnown RBP5.77□□□□□ -1.49
UBE2D3-204ENST00000349311 ATP5J2P56134 94 aa5.77□□□□□ -1.49
UBE2D3-204ENST00000349311 Q1RN00 199 aa5.77□□□□□ -1.49
UBE2D3-204ENST00000349311 C2orf82Q6UX34 121 aa5.77□□□□□ -1.49
UBE2D3-204ENST00000349311 TMEM263Q8WUH6 116 aaKnown RBP5.77□□□□□ -1.49
UBE2D3-204ENST00000349311 TMEM141Q96I45 108 aa5.77□□□□□ -1.49
UBE2D3-204ENST00000349311 RNF5Q99942 180 aa5.77□□□□□ -1.49
UBE2D3-204ENST00000349311 ZNRD1Q9P1U0 126 aa5.77□□□□□ -1.49
UBE2D3-204ENST00000349311 NPFFO15130 113 aa5.76□□□□□ -1.49
UBE2D3-204ENST00000349311 COX6CP09669 75 aa5.76□□□□□ -1.49
UBE2D3-204ENST00000349311 EMP1P54849 157 aa5.76□□□□□ -1.49
UBE2D3-204ENST00000349311 MFAP4P55083 255 aa5.76□□□□□ -1.49
UBE2D3-204ENST00000349311 ZNF56Q15929 161 aa5.76□□□□□ -1.49
UBE2D3-204ENST00000349311 DUX4L9Q6RFH8 374 aaPredicted RBP5.76□□□□□ -1.49
UBE2D3-204ENST00000349311 C2orf66Q6UXQ4 117 aa5.76□□□□□ -1.49
UBE2D3-204ENST00000349311 TRPT1Q86TN4 253 aaKnown RBP5.76□□□□□ -1.49
UBE2D3-204ENST00000349311 DEFB108BQ8NET1 73 aa5.76□□□□□ -1.49
UBE2D3-204ENST00000349311 LINC00526Q96FQ7 95 aa5.76□□□□□ -1.49
UBE2D3-204ENST00000349311 DOPEY1Q5JWR5 2465 aa5.75□□□□□ -1.49
UBE2D3-204ENST00000349311 SETXQ7Z333 2677 aaKnown RBP5.75□□□□□ -1.49
UBE2D3-204ENST00000349311 K7EIM0 57 aa5.75□□□□□ -1.49
UBE2D3-204ENST00000349311 LEPROTO15243 131 aa5.75□□□□□ -1.49
UBE2D3-204ENST00000349311 TRGV3P03979 118 aa5.75□□□□□ -1.49
UBE2D3-204ENST00000349311 LINC00694P0DN24 101 aa5.75□□□□□ -1.49
UBE2D3-204ENST00000349311 BSPH1Q075Z2 132 aa5.75□□□□□ -1.49
UBE2D3-204ENST00000349311 EBI3Q14213 229 aa5.75□□□□□ -1.49
UBE2D3-204ENST00000349311 PMVKQ15126 192 aa5.75□□□□□ -1.49
UBE2D3-204ENST00000349311 SPANXN1Q5VSR9 72 aa5.75□□□□□ -1.49
UBE2D3-204ENST00000349311 TMEM219Q86XT9 240 aa5.75□□□□□ -1.49
UBE2D3-204ENST00000349311 Q8TAT8 98 aa5.75□□□□□ -1.49
UBE2D3-204ENST00000349311 CHCHD5Q9BSY4 110 aa5.75□□□□□ -1.49
UBE2D3-204ENST00000349311 KRTAP1-5Q9BYS1 174 aa5.75□□□□□ -1.49
UBE2D3-204ENST00000349311 UBTD1Q9HAC8 227 aa5.75□□□□□ -1.49
UBE2D3-204ENST00000349311 ZNF256Q9Y2P7 627 aaPredicted RBP5.75□□□□□ -1.49
UBE2D3-204ENST00000349311 HRNRQ86YZ3 2850 aaPredicted RBP5.74□□□□□ -1.49
UBE2D3-204ENST00000349311 HELZ2Q9BYK8 2649 aaKnown RBP5.74□□□□□ -1.49
UBE2D3-204ENST00000349311 FLNCQ14315 2725 aa5.74□□□□□ -1.49
UBE2D3-204ENST00000349311 A0A0J9YX75 114 aa5.74□□□□□ -1.49
UBE2D3-204ENST00000349311 A4D1N5 150 aa5.74□□□□□ -1.49
UBE2D3-204ENST00000349311 J3QQQ9 107 aa5.74□□□□□ -1.49
UBE2D3-204ENST00000349311 NDUFB3O43676 98 aa5.74□□□□□ -1.49
UBE2D3-204ENST00000349311 IGHV1-46P01743 117 aa5.74□□□□□ -1.49
UBE2D3-204ENST00000349311 IGHV4-39P01824 125 aa5.74□□□□□ -1.49
UBE2D3-204ENST00000349311 CCL3L1P16619 93 aa5.74□□□□□ -1.49
UBE2D3-204ENST00000349311 CXCL5P42830 114 aa5.74□□□□□ -1.49
UBE2D3-204ENST00000349311 DLX1P56177 255 aa5.74□□□□□ -1.49
UBE2D3-204ENST00000349311 DSCR9P59020 149 aa5.74□□□□□ -1.49
UBE2D3-204ENST00000349311 HERVK_113P63121 156 aa5.74□□□□□ -1.49
UBE2D3-204ENST00000349311 MRPL53Q96EL3 112 aaKnown RBP5.74□□□□□ -1.49
UBE2D3-204ENST00000349311 DPH3P1Q9H4G8 78 aa5.74□□□□□ -1.49
UBE2D3-204ENST00000349311 MYO18BQ8IUG5 2567 aa5.74□□□□□ -1.49
UBE2D3-204ENST00000349311 TEX49A0A1B0GTD5 131 aa5.73□□□□□ -1.49
UBE2D3-204ENST00000349311 FAM236AA0A1B0GUQ0 79 aa5.73□□□□□ -1.49
UBE2D3-204ENST00000349311 FAM236BA0A1B0GV22 79 aa5.73□□□□□ -1.49
UBE2D3-204ENST00000349311 SDHAF1A6NFY7 115 aa5.73□□□□□ -1.49
UBE2D3-204ENST00000349311 LOXP28300 417 aaPredicted RBP5.73□□□□□ -1.49
UBE2D3-204ENST00000349311 CRIP2P52943 208 aaPredicted RBP5.73□□□□□ -1.49
UBE2D3-204ENST00000349311 ADIPOQQ15848 244 aa5.73□□□□□ -1.49
UBE2D3-204ENST00000349311 LINC00643Q86TS7 51 aa5.73□□□□□ -1.49
UBE2D3-204ENST00000349311 KLHL30-AS1Q8NEE0 82 aa5.73□□□□□ -1.49
UBE2D3-204ENST00000349311 TIMM17AQ99595 171 aa5.73□□□□□ -1.49
UBE2D3-204ENST00000349311 ZNF580Q9UK33 172 aa5.73□□□□□ -1.49
UBE2D3-204ENST00000349311 USP9XQ93008 2570 aaPredicted RBP5.72□□□□□ -1.49
UBE2D3-204ENST00000349311 IGLV4-69A0A075B6H9 119 aa5.72□□□□□ -1.49
UBE2D3-204ENST00000349311 TRAV26-2A0A0B4J265 109 aa5.72□□□□□ -1.49
UBE2D3-204ENST00000349311 IGKV3D-20A0A0C4DH25 116 aa5.72□□□□□ -1.49
UBE2D3-204ENST00000349311 IGHV7-4-1A0A0J9YVY3 117 aa5.72□□□□□ -1.49
UBE2D3-204ENST00000349311 APELAP0DMC3 54 aa5.72□□□□□ -1.49
UBE2D3-204ENST00000349311 COX7CP15954 63 aa5.72□□□□□ -1.49
UBE2D3-204ENST00000349311 DLX6P56179 175 aa5.72□□□□□ -1.49
UBE2D3-204ENST00000349311 GAGE2AQ6NT46 116 aa5.72□□□□□ -1.49
UBE2D3-204ENST00000349311 FAM19A5Q7Z5A7 132 aaPredicted RBP5.72□□□□□ -1.49
UBE2D3-204ENST00000349311 DYNAPQ8N1N2 210 aa5.72□□□□□ -1.49
UBE2D3-204ENST00000349311 POM121L12Q8N7R1 296 aa5.72□□□□□ -1.49
UBE2D3-204ENST00000349311 PLXNB1O43157 2135 aa5.71□□□□□ -1.5
UBE2D3-204ENST00000349311 TENM4Q6N022 2769 aa5.71□□□□□ -1.5
UBE2D3-204ENST00000349311 IGHV1-3A0A0C4DH29 117 aa5.71□□□□□ -1.5
UBE2D3-204ENST00000349311 KRTAP29-1A8MX34 341 aaPredicted RBP5.71□□□□□ -1.5
UBE2D3-204ENST00000349311 E7EQL1 145 aa5.71□□□□□ -1.5
UBE2D3-204ENST00000349311 H7C2G1 150 aa5.71□□□□□ -1.5
UBE2D3-204ENST00000349311 H7C423 109 aa5.71□□□□□ -1.5
UBE2D3-204ENST00000349311 ATOX1O00244 68 aa5.71□□□□□ -1.5
UBE2D3-204ENST00000349311 PRSS2P07478 247 aa5.71□□□□□ -1.5
UBE2D3-204ENST00000349311 IGHV1-8P0DP01 117 aa5.71□□□□□ -1.5
UBE2D3-204ENST00000349311 CRYGAP11844 174 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms