RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 TMEM263Q8WUH6 116 aaKnown RBP11.41□□□□□ -0.58
PTBP1-201ENST00000349038 C20orf173Q96LM9 149 aa11.41□□□□□ -0.58
PTBP1-201ENST00000349038 TRAV12-2A0A075B6T6 113 aa11.41□□□□□ -0.58
PTBP1-201ENST00000349038 H7C423 109 aa11.41□□□□□ -0.58
PTBP1-201ENST00000349038 TRBV10-2A0A0K0K1G8 114 aa11.4□□□□□ -0.58
PTBP1-201ENST00000349038 ATP6V0E1O15342 81 aa11.4□□□□□ -0.58
PTBP1-201ENST00000349038 SUMO4Q6EEV6 95 aa11.39□□□□□ -0.59
PTBP1-201ENST00000349038 LY6G5BQ8NDX9 201 aa11.39□□□□□ -0.59
PTBP1-201ENST00000349038 B9A039 149 aa11.39□□□□□ -0.59
PTBP1-201ENST00000349038 PRR30Q53SZ7 412 aaPredicted RBP11.39□□□□□ -0.59
PTBP1-201ENST00000349038 ICOSQ9Y6W8 199 aa11.39□□□□□ -0.59
PTBP1-201ENST00000349038 TRAV21A0A0B4J279 112 aa11.38□□□□□ -0.59
PTBP1-201ENST00000349038 IGF2RP11717 2491 aa11.38□□□□□ -0.59
PTBP1-201ENST00000349038 TRAV13-1A0A0B4J241 112 aa11.38□□□□□ -0.59
PTBP1-201ENST00000349038 HOXD3P31249 432 aaPredicted RBP11.38□□□□□ -0.59
PTBP1-201ENST00000349038 TMEM101Q96IK0 257 aa11.38□□□□□ -0.59
PTBP1-201ENST00000349038 HERVK_113P63121 156 aa11.38□□□□□ -0.59
PTBP1-201ENST00000349038 SBSPONQ8IVN8 264 aa11.38□□□□□ -0.59
PTBP1-201ENST00000349038 KLK9Q9UKQ9 250 aa11.38□□□□□ -0.59
PTBP1-201ENST00000349038 ADAMTSL4-AS1Q5T5F5 129 aa11.37□□□□□ -0.59
PTBP1-201ENST00000349038 KNCNA6PVL3 124 aa11.37□□□□□ -0.59
PTBP1-201ENST00000349038 ZNF876PQ49A33 203 aa11.37□□□□□ -0.59
PTBP1-201ENST00000349038 CSMD2Q7Z408 3487 aa11.37□□□□□ -0.59
PTBP1-201ENST00000349038 IGHV7-81A0A0B4J1V7 117 aa11.36□□□□□ -0.59
PTBP1-201ENST00000349038 NPFFO15130 113 aa11.36□□□□□ -0.59
PTBP1-201ENST00000349038 TRBV12-3P01733 135 aa11.36□□□□□ -0.59
PTBP1-201ENST00000349038 PAPPA-AS1Q5QFB9 102 aa11.36□□□□□ -0.59
PTBP1-201ENST00000349038 GAGE2AQ6NT46 116 aa11.36□□□□□ -0.59
PTBP1-201ENST00000349038 LINC01619G3V211 115 aa11.36□□□□□ -0.59
PTBP1-201ENST00000349038 P0DMU3 169 aa11.36□□□□□ -0.59
PTBP1-201ENST00000349038 FAM231AP0DMU4 169 aa11.36□□□□□ -0.59
PTBP1-201ENST00000349038 FAM231CP0DMU5 169 aa11.36□□□□□ -0.59
PTBP1-201ENST00000349038 VMO1Q7Z5L0 202 aa11.36□□□□□ -0.59
PTBP1-201ENST00000349038 A0A0J9YXY3 114 aa11.35□□□□□ -0.59
PTBP1-201ENST00000349038 VCYO14598 125 aa11.35□□□□□ -0.59
PTBP1-201ENST00000349038 RHOHQ15669 191 aa11.35□□□□□ -0.59
PTBP1-201ENST00000349038 UNQ9165/PRO28630Q6UXU0 137 aa11.35□□□□□ -0.59
PTBP1-201ENST00000349038 GPHB5Q86YW7 130 aa11.35□□□□□ -0.59
PTBP1-201ENST00000349038 USP9YO00507 2555 aaPredicted RBP11.35□□□□□ -0.59
PTBP1-201ENST00000349038 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.35□□□□□ -0.59
PTBP1-201ENST00000349038 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.35□□□□□ -0.59
PTBP1-201ENST00000349038 hADV29S1A0JD25 119 aa11.35□□□□□ -0.59
PTBP1-201ENST00000349038 IGIPA6NJ69 53 aa11.35□□□□□ -0.59
PTBP1-201ENST00000349038 ODF3BA8MYP8 253 aa11.35□□□□□ -0.59
PTBP1-201ENST00000349038 NXPH4O95158 308 aa11.35□□□□□ -0.59
PTBP1-201ENST00000349038 CD28P10747 220 aa11.35□□□□□ -0.59
PTBP1-201ENST00000349038 TIMM21Q9BVV7 248 aa11.35□□□□□ -0.59
PTBP1-201ENST00000349038 TLN2Q9Y4G6 2542 aa11.34□□□□□ -0.59
PTBP1-201ENST00000349038 NDUFA12Q9UI09 145 aa11.34□□□□□ -0.59
PTBP1-201ENST00000349038 CSDC2Q9Y534 153 aaKnown RBP11.34□□□□□ -0.59
PTBP1-201ENST00000349038 I3L3M4 83 aa11.34□□□□□ -0.59
PTBP1-201ENST00000349038 IGHV3-30-3P0DP02 117 aa11.34□□□□□ -0.59
PTBP1-201ENST00000349038 LINC01587Q99440 93 aa11.34□□□□□ -0.59
PTBP1-201ENST00000349038 PRM2P04554 102 aa11.33□□□□□ -0.6
PTBP1-201ENST00000349038 RNASE3P12724 160 aaKnown RBP11.33□□□□□ -0.6
PTBP1-201ENST00000349038 FAM19A5Q7Z5A7 132 aaPredicted RBP11.33□□□□□ -0.6
PTBP1-201ENST00000349038 CCDC140Q96MF4 163 aa11.33□□□□□ -0.6
PTBP1-201ENST00000349038 JMJD1CQ15652 2540 aa11.33□□□□□ -0.6
PTBP1-201ENST00000349038 IGHV3-38A0A0C4DH36 116 aa11.33□□□□□ -0.6
PTBP1-201ENST00000349038 RNF223E7ERA6 249 aa11.33□□□□□ -0.6
PTBP1-201ENST00000349038 M0R1W7 72 aa11.33□□□□□ -0.6
PTBP1-201ENST00000349038 ZFAND3Q9H8U3 227 aa11.33□□□□□ -0.6
PTBP1-201ENST00000349038 IGKV3D-7A0A0C4DH55 119 aa11.32□□□□□ -0.6
PTBP1-201ENST00000349038 Q8N6K4 173 aa11.32□□□□□ -0.6
PTBP1-201ENST00000349038 ZFAND2AQ8N6M9 145 aa11.32□□□□□ -0.6
PTBP1-201ENST00000349038 GRNP28799 593 aaKnown RBP11.32□□□□□ -0.6
PTBP1-201ENST00000349038 Q9HAA7 133 aa11.32□□□□□ -0.6
PTBP1-201ENST00000349038 EDN2P20800 178 aa11.31□□□□□ -0.6
PTBP1-201ENST00000349038 AMELXQ99217 191 aa11.31□□□□□ -0.6
PTBP1-201ENST00000349038 MDFICQ9P1T7 246 aa11.31□□□□□ -0.6
PTBP1-201ENST00000349038 LY6EQ16553 131 aa11.31□□□□□ -0.6
PTBP1-201ENST00000349038 Q8NA96 180 aa11.3□□□□□ -0.6
PTBP1-201ENST00000349038 SYNJ2BPP57105 145 aa11.3□□□□□ -0.6
PTBP1-201ENST00000349038 SDIM1Q6ZPB5 146 aa11.3□□□□□ -0.6
PTBP1-201ENST00000349038 C9orf47Q6ZRZ4 202 aa11.3□□□□□ -0.6
PTBP1-201ENST00000349038 IGHV4-4A0A075B6R2 117 aa11.3□□□□□ -0.6
PTBP1-201ENST00000349038 LEPROTO15243 131 aa11.3□□□□□ -0.6
PTBP1-201ENST00000349038 PROK1P58294 105 aa11.3□□□□□ -0.6
PTBP1-201ENST00000349038 TMEM223A0PJW6 202 aa11.29□□□□□ -0.6
PTBP1-201ENST00000349038 NDUFA7O95182 113 aa11.29□□□□□ -0.6
PTBP1-201ENST00000349038 KIR2DL5BQ8NHK3 375 aa11.29□□□□□ -0.6
PTBP1-201ENST00000349038 EBI3Q14213 229 aa11.29□□□□□ -0.6
PTBP1-201ENST00000349038 BSNQ9UPA5 3926 aa11.29□□□□□ -0.6
PTBP1-201ENST00000349038 A0A0B4J2C4 111 aa11.28□□□□□ -0.6
PTBP1-201ENST00000349038 DSCR8Q96T75 97 aa11.28□□□□□ -0.6
PTBP1-201ENST00000349038 FN1P02751 2386 aaKnown RBP11.28□□□□□ -0.6
PTBP1-201ENST00000349038 NCOR2Q9Y618 2525 aa11.28□□□□□ -0.6
PTBP1-201ENST00000349038 SMCR5Q8TEV8 140 aa11.28□□□□□ -0.6
PTBP1-201ENST00000349038 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.27□□□□□ -0.6
PTBP1-201ENST00000349038 IGKV2-29A2NJV5 120 aaPredicted RBP11.27□□□□□ -0.6
PTBP1-201ENST00000349038 TMEM126AQ9H061 195 aa11.27□□□□□ -0.6
PTBP1-201ENST00000349038 A0A087WVE0 104 aa11.27□□□□□ -0.61
PTBP1-201ENST00000349038 PF4V1P10720 104 aa11.27□□□□□ -0.61
PTBP1-201ENST00000349038 KLK9Q2XQG4 91 aa11.27□□□□□ -0.61
PTBP1-201ENST00000349038 Q8N9W7 124 aa11.27□□□□□ -0.61
PTBP1-201ENST00000349038 Q9UF83 564 aa11.27□□□□□ -0.61
PTBP1-201ENST00000349038 TMEM141Q96I45 108 aa11.26□□□□□ -0.61
PTBP1-201ENST00000349038 CRYBG3Q68DQ2 2970 aa11.26□□□□□ -0.61
PTBP1-201ENST00000349038 DAZ2Q13117 558 aaKnown RBP11.26□□□□□ -0.61
PTBP1-201ENST00000349038 Q6Q795 121 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms