RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 VSIG2Q96IQ7 327 aa18.97■□□□□ 0.63
SSBP4-202ENST00000348495 TRBV6-5A0A0K0K1A5 114 aa18.97■□□□□ 0.63
SSBP4-202ENST00000348495 OR10J3Q5JRS4 329 aa18.97■□□□□ 0.63
SSBP4-202ENST00000348495 NEXN-AS1Q8NBZ9 246 aa18.97■□□□□ 0.63
SSBP4-202ENST00000348495 DEFB131BA0A096LNP1 70 aa18.96■□□□□ 0.63
SSBP4-202ENST00000348495 PRADC1Q9BSG0 188 aa18.95■□□□□ 0.62
SSBP4-202ENST00000348495 TRAV26-1A0A087WT03 109 aa18.94■□□□□ 0.62
SSBP4-202ENST00000348495 TRAV10A0A0B4J240 114 aa18.94■□□□□ 0.62
SSBP4-202ENST00000348495 DNAJC30Q96LL9 226 aa18.94■□□□□ 0.62
SSBP4-202ENST00000348495 LOC100131303A0A0U1RQF7 123 aa18.94■□□□□ 0.62
SSBP4-202ENST00000348495 C1orf196B1AJZ1 125 aa18.94■□□□□ 0.62
SSBP4-202ENST00000348495 PAX4O43316 350 aa18.94■□□□□ 0.62
SSBP4-202ENST00000348495 HIST1H2BKO60814 126 aa18.93■□□□□ 0.62
SSBP4-202ENST00000348495 HIST1H2BJP06899 126 aa18.93■□□□□ 0.62
SSBP4-202ENST00000348495 HIST1H2BOP23527 126 aa18.93■□□□□ 0.62
SSBP4-202ENST00000348495 HIST1H2BBP33778 126 aa18.93■□□□□ 0.62
SSBP4-202ENST00000348495 HIST1H2BDP58876 126 aa18.93■□□□□ 0.62
SSBP4-202ENST00000348495 HIST1H2BCP62807 126 aa18.93■□□□□ 0.62
SSBP4-202ENST00000348495 HIST2H2BEQ16778 126 aa18.93■□□□□ 0.62
SSBP4-202ENST00000348495 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.93■□□□□ 0.62
SSBP4-202ENST00000348495 HIST1H2BHQ93079 126 aa18.93■□□□□ 0.62
SSBP4-202ENST00000348495 HIST1H2BNQ99877 126 aa18.93■□□□□ 0.62
SSBP4-202ENST00000348495 HIST1H2BMQ99879 126 aa18.93■□□□□ 0.62
SSBP4-202ENST00000348495 C20orf78Q9BR46 151 aa18.93■□□□□ 0.62
SSBP4-202ENST00000348495 PRSS47A8MTI9 375 aa18.92■□□□□ 0.62
SSBP4-202ENST00000348495 SUMO2P61956 95 aaKnown RBP18.92■□□□□ 0.62
SSBP4-202ENST00000348495 C18orf32Q8TCD1 76 aa18.92■□□□□ 0.62
SSBP4-202ENST00000348495 TRBV7-3A0A075B6L6 115 aa18.91■□□□□ 0.62
SSBP4-202ENST00000348495 A0A0J9YY99 117 aa18.91■□□□□ 0.62
SSBP4-202ENST00000348495 LINC00694P0DN24 101 aa18.91■□□□□ 0.62
SSBP4-202ENST00000348495 ST20Q9HBF5 79 aa18.91■□□□□ 0.62
SSBP4-202ENST00000348495 TNFRSF18Q9Y5U5 241 aa18.91■□□□□ 0.62
SSBP4-202ENST00000348495 H3BNG1 76 aa18.9■□□□□ 0.62
SSBP4-202ENST00000348495 GYPEP15421 78 aa18.9■□□□□ 0.62
SSBP4-202ENST00000348495 POLR2KP53803 58 aaKnown RBP18.9■□□□□ 0.62
SSBP4-202ENST00000348495 RPL36AP83881 106 aaKnown RBP18.9■□□□□ 0.62
SSBP4-202ENST00000348495 ZNRF2Q8NHG8 242 aa18.9■□□□□ 0.62
SSBP4-202ENST00000348495 RPL36ALQ969Q0 106 aaKnown RBP18.9■□□□□ 0.62
SSBP4-202ENST00000348495 RPL32P62910 135 aaKnown RBP18.89■□□□□ 0.61
SSBP4-202ENST00000348495 PHLDA1Q8WV24 401 aaPredicted RBP18.89■□□□□ 0.61
SSBP4-202ENST00000348495 TMEM70Q9BUB7 260 aa18.89■□□□□ 0.61
SSBP4-202ENST00000348495 MAP1LC3AQ9H492 121 aa18.89■□□□□ 0.61
SSBP4-202ENST00000348495 GAGE12JA6NER3 117 aa18.88■□□□□ 0.61
SSBP4-202ENST00000348495 SDHAF1A6NFY7 115 aa18.88■□□□□ 0.61
SSBP4-202ENST00000348495 GAGE1Q13065 139 aa18.88■□□□□ 0.61
SSBP4-202ENST00000348495 GAGE4Q13068 117 aa18.88■□□□□ 0.61
SSBP4-202ENST00000348495 GAGE5Q13069 117 aa18.88■□□□□ 0.61
SSBP4-202ENST00000348495 IQCJQ1A5X6 159 aa18.88■□□□□ 0.61
SSBP4-202ENST00000348495 GAGE13Q4V321 117 aa18.88■□□□□ 0.61
SSBP4-202ENST00000348495 UBE2D3P61077 147 aa18.88■□□□□ 0.61
SSBP4-202ENST00000348495 UBE2D2P62837 147 aa18.88■□□□□ 0.61
SSBP4-202ENST00000348495 TGP01266 2768 aa18.87■□□□□ 0.61
SSBP4-202ENST00000348495 Q0VG73 95 aa18.87■□□□□ 0.61
SSBP4-202ENST00000348495 IGLV2-18A0A075B6J9 118 aa18.86■□□□□ 0.61
SSBP4-202ENST00000348495 RAB5BP61020 215 aa18.86■□□□□ 0.61
SSBP4-202ENST00000348495 SMIM2Q9BVW6 85 aa18.86■□□□□ 0.61
SSBP4-202ENST00000348495 TRBV27A0A0K0K1C4 114 aa18.86■□□□□ 0.61
SSBP4-202ENST00000348495 LOC389332A0A1B0GUA5 103 aa18.86■□□□□ 0.61
SSBP4-202ENST00000348495 VCYO14598 125 aa18.83■□□□□ 0.61
SSBP4-202ENST00000348495 IFI27P40305 119 aaPredicted RBP18.83■□□□□ 0.61
SSBP4-202ENST00000348495 NEGR1Q7Z3B1 354 aa18.83■□□□□ 0.61
SSBP4-202ENST00000348495 Q8N8P6 123 aa18.83■□□□□ 0.6
SSBP4-202ENST00000348495 URB1-AS1Q96HZ7 61 aa18.83■□□□□ 0.6
SSBP4-202ENST00000348495 A0A096LPF7 62 aa18.82■□□□□ 0.6
SSBP4-202ENST00000348495 MRPL23Q16540 153 aaKnown RBP18.82■□□□□ 0.6
SSBP4-202ENST00000348495 DAZ4Q86SG3 579 aaKnown RBP18.82■□□□□ 0.6
SSBP4-202ENST00000348495 NXT2Q9NPJ8 142 aaKnown RBP18.82■□□□□ 0.6
SSBP4-202ENST00000348495 DAZ3Q9NR90 486 aaKnown RBP18.82■□□□□ 0.6
SSBP4-202ENST00000348495 ICOSQ9Y6W8 199 aa18.82■□□□□ 0.6
SSBP4-202ENST00000348495 PMCHP20382 165 aa18.81■□□□□ 0.6
SSBP4-202ENST00000348495 I3L3M4 83 aa18.8■□□□□ 0.6
SSBP4-202ENST00000348495 PRSS3P2Q8NHM4 247 aa18.8■□□□□ 0.6
SSBP4-202ENST00000348495 IGHV3-38A0A0C4DH36 116 aa18.8■□□□□ 0.6
SSBP4-202ENST00000348495 LINC01546A6NGU7 62 aa18.8■□□□□ 0.6
SSBP4-202ENST00000348495 NIT1Q86X76 327 aa18.79■□□□□ 0.6
SSBP4-202ENST00000348495 BAGE3Q86Y29 109 aa18.79■□□□□ 0.6
SSBP4-202ENST00000348495 LINC00310P59036 64 aa18.78■□□□□ 0.6
SSBP4-202ENST00000348495 CEMP1Q6PRD7 247 aaPredicted RBP18.78■□□□□ 0.6
SSBP4-202ENST00000348495 ATP6V0E2Q8NHE4 81 aa18.78■□□□□ 0.6
SSBP4-202ENST00000348495 TSHBP01222 138 aa18.77■□□□□ 0.6
SSBP4-202ENST00000348495 COA6Q5JTJ3 125 aaKnown RBP18.77■□□□□ 0.6
SSBP4-202ENST00000348495 SH2D6Q7Z4S9 175 aa18.77■□□□□ 0.6
SSBP4-202ENST00000348495 LINC00614P0C842 121 aa18.77■□□□□ 0.59
SSBP4-202ENST00000348495 KIR2DL4Q99706 377 aa18.77■□□□□ 0.59
SSBP4-202ENST00000348495 C15orf53Q8NAA6 179 aa18.76■□□□□ 0.59
SSBP4-202ENST00000348495 DEFB104AQ8WTQ1 72 aa18.76■□□□□ 0.59
SSBP4-202ENST00000348495 NUPR2A6NF83 97 aa18.75■□□□□ 0.59
SSBP4-202ENST00000348495 IGLL5B9A064 214 aa18.75■□□□□ 0.59
SSBP4-202ENST00000348495 FA2HQ7L5A8 372 aa18.75■□□□□ 0.59
SSBP4-202ENST00000348495 K7EMI3 77 aa18.74■□□□□ 0.59
SSBP4-202ENST00000348495 TCAPO15273 167 aa18.74■□□□□ 0.59
SSBP4-202ENST00000348495 SERF1AO75920 110 aa18.74■□□□□ 0.59
SSBP4-202ENST00000348495 NUDT3O95989 172 aa18.74■□□□□ 0.59
SSBP4-202ENST00000348495 NDUFA6P56556 154 aa18.74■□□□□ 0.59
SSBP4-202ENST00000348495 CHCHD1Q96BP2 118 aaKnown RBP18.74■□□□□ 0.59
SSBP4-202ENST00000348495 AP5S1Q9NUS5 200 aa18.74■□□□□ 0.59
SSBP4-202ENST00000348495 RNASEKQ6P5S7 137 aaKnown RBP18.73■□□□□ 0.59
SSBP4-202ENST00000348495 NTM-AS1Q6ZSK4 140 aa18.73■□□□□ 0.59
SSBP4-202ENST00000348495 WWC2-AS2Q96NR7 200 aa18.73■□□□□ 0.59
SSBP4-202ENST00000348495 GTSF1LQ9H1H1 148 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms