RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 C20orf78Q9BR46 151 aa12.54□□□□□ -0.4
SMARCC2-202ENST00000347471 CYSLTR1Q9Y271 337 aa12.54□□□□□ -0.4
SMARCC2-202ENST00000347471 TNFRSF18Q9Y5U5 241 aa12.54□□□□□ -0.4
SMARCC2-202ENST00000347471 VCYO14598 125 aa12.54□□□□□ -0.4
SMARCC2-202ENST00000347471 ODF1Q14990 250 aa12.54□□□□□ -0.4
SMARCC2-202ENST00000347471 RNASE13Q5GAN3 156 aaKnown RBP12.53□□□□□ -0.4
SMARCC2-202ENST00000347471 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.53□□□□□ -0.4
SMARCC2-202ENST00000347471 M0R2P5 195 aa12.53□□□□□ -0.4
SMARCC2-202ENST00000347471 PPP1R17O96001 155 aa12.53□□□□□ -0.4
SMARCC2-202ENST00000347471 NOP10Q9NPE3 64 aaKnown RBP12.53□□□□□ -0.4
SMARCC2-202ENST00000347471 DPM2O94777 84 aa12.53□□□□□ -0.4
SMARCC2-202ENST00000347471 STAB1Q9NY15 2570 aa12.52□□□□□ -0.4
SMARCC2-202ENST00000347471 ADARB2-AS1A8MUL3 147 aa12.52□□□□□ -0.41
SMARCC2-202ENST00000347471 M0QY20 66 aa12.52□□□□□ -0.41
SMARCC2-202ENST00000347471 ZFP2Q6ZN57 461 aa12.52□□□□□ -0.41
SMARCC2-202ENST00000347471 LINC00482Q8N8I6 264 aa12.51□□□□□ -0.41
SMARCC2-202ENST00000347471 TRGV2A0A075B6R0 118 aa12.51□□□□□ -0.41
SMARCC2-202ENST00000347471 TRAV25A0A0B4J276 109 aa12.51□□□□□ -0.41
SMARCC2-202ENST00000347471 C1orf158Q8N1D5 194 aa12.51□□□□□ -0.41
SMARCC2-202ENST00000347471 CHTOPQ9Y3Y2 248 aaKnown RBP12.51□□□□□ -0.41
SMARCC2-202ENST00000347471 OR4C5Q8NGB2 326 aa12.51□□□□□ -0.41
SMARCC2-202ENST00000347471 GAGE12BA1L429 117 aa12.5□□□□□ -0.41
SMARCC2-202ENST00000347471 GAGE7O76087 117 aa12.5□□□□□ -0.41
SMARCC2-202ENST00000347471 GAGE12FP0CL80 117 aa12.5□□□□□ -0.41
SMARCC2-202ENST00000347471 GAGE12GP0CL81 117 aa12.5□□□□□ -0.41
SMARCC2-202ENST00000347471 GAGE12IP0CL82 117 aa12.5□□□□□ -0.41
SMARCC2-202ENST00000347471 Q6ZTI0 123 aa12.5□□□□□ -0.41
SMARCC2-202ENST00000347471 TRPT1Q86TN4 253 aaKnown RBP12.5□□□□□ -0.41
SMARCC2-202ENST00000347471 IGKV2D-26A0A0A0MRZ7 120 aa12.5□□□□□ -0.41
SMARCC2-202ENST00000347471 IGLV1-51P01701 117 aa12.5□□□□□ -0.41
SMARCC2-202ENST00000347471 Q6ZSN1 163 aa12.5□□□□□ -0.41
SMARCC2-202ENST00000347471 C2orf88Q9BSF0 95 aa12.5□□□□□ -0.41
SMARCC2-202ENST00000347471 NXPH4O95158 308 aa12.49□□□□□ -0.41
SMARCC2-202ENST00000347471 CEMP1Q6PRD7 247 aaPredicted RBP12.49□□□□□ -0.41
SMARCC2-202ENST00000347471 BAHCC1Q9P281 2608 aa12.49□□□□□ -0.41
SMARCC2-202ENST00000347471 TRAV2A0A0B4J234 112 aa12.49□□□□□ -0.41
SMARCC2-202ENST00000347471 NDUFA7O95182 113 aa12.49□□□□□ -0.41
SMARCC2-202ENST00000347471 IGHV3-64A0A075B6Q5 118 aa12.49□□□□□ -0.41
SMARCC2-202ENST00000347471 PRSS29PA6NIE9 313 aa12.48□□□□□ -0.41
SMARCC2-202ENST00000347471 RRN3P1Q2M238 152 aa12.48□□□□□ -0.41
SMARCC2-202ENST00000347471 COL5A1-AS1Q5SY13 56 aa12.48□□□□□ -0.41
SMARCC2-202ENST00000347471 TMEM170BQ5T4T1 132 aa12.48□□□□□ -0.41
SMARCC2-202ENST00000347471 H7C1H1 209 aa12.48□□□□□ -0.41
SMARCC2-202ENST00000347471 DEFB130BP0DP73 79 aa12.47□□□□□ -0.41
SMARCC2-202ENST00000347471 DEFB130AP0DP74 79 aa12.47□□□□□ -0.41
SMARCC2-202ENST00000347471 MORN3Q6PF18 240 aaPredicted RBP12.47□□□□□ -0.41
SMARCC2-202ENST00000347471 NDUFA11Q86Y39 141 aa12.47□□□□□ -0.41
SMARCC2-202ENST00000347471 A8MWV9 139 aa12.47□□□□□ -0.41
SMARCC2-202ENST00000347471 COX8AP10176 69 aa12.47□□□□□ -0.41
SMARCC2-202ENST00000347471 TOMM6Q96B49 74 aa12.47□□□□□ -0.41
SMARCC2-202ENST00000347471 ZNF479Q96JC4 524 aa12.47□□□□□ -0.41
SMARCC2-202ENST00000347471 DEFB4AO15263 64 aa12.46□□□□□ -0.41
SMARCC2-202ENST00000347471 POLR2KP53803 58 aaKnown RBP12.46□□□□□ -0.41
SMARCC2-202ENST00000347471 BAALCQ8WXS3 180 aa12.46□□□□□ -0.41
SMARCC2-202ENST00000347471 K7EMI3 77 aa12.46□□□□□ -0.41
SMARCC2-202ENST00000347471 CFAP126Q5VTH2 177 aa12.46□□□□□ -0.41
SMARCC2-202ENST00000347471 A0A087WX48 190 aa12.46□□□□□ -0.42
SMARCC2-202ENST00000347471 ZNRF2Q8NHG8 242 aa12.46□□□□□ -0.42
SMARCC2-202ENST00000347471 CRLF1O75462 422 aa12.45□□□□□ -0.42
SMARCC2-202ENST00000347471 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.45□□□□□ -0.42
SMARCC2-202ENST00000347471 IGKV2-29A2NJV5 120 aaPredicted RBP12.45□□□□□ -0.42
SMARCC2-202ENST00000347471 NAA38Q9BRA0 125 aaKnown RBP12.45□□□□□ -0.42
SMARCC2-202ENST00000347471 I3L3M4 83 aa12.44□□□□□ -0.42
SMARCC2-202ENST00000347471 COL6A5A8TX70 2615 aa12.44□□□□□ -0.42
SMARCC2-202ENST00000347471 F8VRH5 84 aa12.44□□□□□ -0.42
SMARCC2-202ENST00000347471 GCSHP23434 173 aa12.44□□□□□ -0.42
SMARCC2-202ENST00000347471 GAGE12JA6NER3 117 aa12.44□□□□□ -0.42
SMARCC2-202ENST00000347471 GAGE1Q13065 139 aa12.44□□□□□ -0.42
SMARCC2-202ENST00000347471 GAGE4Q13068 117 aa12.44□□□□□ -0.42
SMARCC2-202ENST00000347471 GAGE5Q13069 117 aa12.44□□□□□ -0.42
SMARCC2-202ENST00000347471 GAGE13Q4V321 117 aa12.44□□□□□ -0.42
SMARCC2-202ENST00000347471 LBHQ53QV2 105 aaPredicted RBP12.44□□□□□ -0.42
SMARCC2-202ENST00000347471 RAB37Q96AX2 223 aa12.44□□□□□ -0.42
SMARCC2-202ENST00000347471 MRPS16Q9Y3D3 137 aaKnown RBP12.44□□□□□ -0.42
SMARCC2-202ENST00000347471 C11orf72Q8NBR9 251 aa12.43□□□□□ -0.42
SMARCC2-202ENST00000347471 TMEM97Q5BJF2 176 aa12.43□□□□□ -0.42
SMARCC2-202ENST00000347471 DGAT2L7PQ6IED9 249 aa12.42□□□□□ -0.42
SMARCC2-202ENST00000347471 OR11H2Q8NH07 326 aa12.42□□□□□ -0.42
SMARCC2-202ENST00000347471 HHLA3Q9XRX5 114 aa12.41□□□□□ -0.42
SMARCC2-202ENST00000347471 SPXQ9BT56 116 aa12.41□□□□□ -0.42
SMARCC2-202ENST00000347471 PTTG1IPP53801 180 aa12.41□□□□□ -0.42
SMARCC2-202ENST00000347471 NOTCH1P46531 2555 aa12.4□□□□□ -0.42
SMARCC2-202ENST00000347471 SCGB1D4Q6XE38 83 aa12.4□□□□□ -0.42
SMARCC2-202ENST00000347471 IGKV3OR2-268A0A0C4DH90 116 aa12.4□□□□□ -0.42
SMARCC2-202ENST00000347471 TRBV27A0A0K0K1C4 114 aa12.4□□□□□ -0.42
SMARCC2-202ENST00000347471 PRSS47A8MTI9 375 aa12.4□□□□□ -0.42
SMARCC2-202ENST00000347471 TSHBP01222 138 aa12.4□□□□□ -0.42
SMARCC2-202ENST00000347471 C12orf54Q6X4T0 127 aa12.4□□□□□ -0.42
SMARCC2-202ENST00000347471 POM121L12Q8N7R1 296 aa12.4□□□□□ -0.42
SMARCC2-202ENST00000347471 VCX2Q9H322 139 aa12.4□□□□□ -0.42
SMARCC2-202ENST00000347471 TRGV4A0A0C4DH28 118 aa12.4□□□□□ -0.42
SMARCC2-202ENST00000347471 K7EP13 123 aa12.4□□□□□ -0.42
SMARCC2-202ENST00000347471 PLNP26678 52 aa12.39□□□□□ -0.43
SMARCC2-202ENST00000347471 COTL1Q14019 142 aa12.39□□□□□ -0.43
SMARCC2-202ENST00000347471 NEXN-AS1Q8NBZ9 246 aa12.39□□□□□ -0.43
SMARCC2-202ENST00000347471 DEFB135Q30KP9 77 aa12.39□□□□□ -0.43
SMARCC2-202ENST00000347471 C11orf86A6NJI1 115 aa12.39□□□□□ -0.43
SMARCC2-202ENST00000347471 VAMP3Q15836 100 aa12.39□□□□□ -0.43
SMARCC2-202ENST00000347471 TMEM263Q8WUH6 116 aaKnown RBP12.39□□□□□ -0.43
SMARCC2-202ENST00000347471 C1QTNF4Q9BXJ3 329 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms