RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 TPSG1Q9NRR2 321 aa15.08■□□□□ 0
HDAC4-201ENST00000345617 BPY2O14599 106 aa15.08■□□□□ 0
HDAC4-201ENST00000345617 MDFICQ9P1T7 246 aa15.08■□□□□ 0
HDAC4-201ENST00000345617 A0A0J9YXY3 114 aa15.08■□□□□ 0
HDAC4-201ENST00000345617 TCL1BO95988 128 aa15.07■□□□□ 0
HDAC4-201ENST00000345617 GYPEP15421 78 aa15.07■□□□□ 0
HDAC4-201ENST00000345617 FANCD2OSQ96PS1 177 aa15.07■□□□□ 0
HDAC4-201ENST00000345617 ACANP16112 2415 aa15.07■□□□□ 0
HDAC4-201ENST00000345617 C14orf177Q52M58 125 aa15.07■□□□□ 0
HDAC4-201ENST00000345617 PIEZO2Q9H5I5 2752 aa15.06■□□□□ 0
HDAC4-201ENST00000345617 ZNRD1Q9P1U0 126 aa15.06■□□□□ 0
HDAC4-201ENST00000345617 P0DMU3 169 aa15.06■□□□□ 0
HDAC4-201ENST00000345617 FAM231AP0DMU4 169 aa15.06■□□□□ 0
HDAC4-201ENST00000345617 FAM231CP0DMU5 169 aa15.06■□□□□ 0
HDAC4-201ENST00000345617 GTSF1Q8WW33 167 aa15.06■□□□□ 0
HDAC4-201ENST00000345617 CLEC2BQ92478 149 aa15.06■□□□□ 0
HDAC4-201ENST00000345617 WI2-2373I1.2A0A1W2PRP0 233 aa15.06■□□□□ 0
HDAC4-201ENST00000345617 Q6ZR03 302 aa15.06■□□□□ 0
HDAC4-201ENST00000345617 TRBV10-1A0A0K0K1A3 114 aa15.05■□□□□ 0
HDAC4-201ENST00000345617 ZNF462Q96JM2 2506 aa15.05■□□□□ -0
HDAC4-201ENST00000345617 GNLYP22749 145 aa15.04■□□□□ -0
HDAC4-201ENST00000345617 TEX49A0A1B0GTD5 131 aa15.04■□□□□ -0
HDAC4-201ENST00000345617 LY6DQ14210 128 aa15.03■□□□□ -0
HDAC4-201ENST00000345617 FAM110AQ9BQ89 295 aa15.03■□□□□ -0
HDAC4-201ENST00000345617 SPART-AS1P0CW21 52 aa15.02■□□□□ -0
HDAC4-201ENST00000345617 SEM1Q6ZVN7 128 aa15.02■□□□□ -0
HDAC4-201ENST00000345617 C5orf38Q86SI9 138 aa15.02■□□□□ -0
HDAC4-201ENST00000345617 IGHV4-4A0A075B6R2 117 aa15.02■□□□□ -0
HDAC4-201ENST00000345617 IGKV4-1P06312 121 aa15.02■□□□□ -0
HDAC4-201ENST00000345617 CASC2Q6XLA1 102 aa15.02■□□□□ -0
HDAC4-201ENST00000345617 RNF183Q96D59 192 aa15.02■□□□□ -0
HDAC4-201ENST00000345617 IGLV11-55A0A075B6I3 123 aa15.02□□□□□ -0.01
HDAC4-201ENST00000345617 TRAV23DV6A0A075B6W5 121 aa15.02□□□□□ -0.01
HDAC4-201ENST00000345617 I3L2K1 104 aa15.01□□□□□ -0.01
HDAC4-201ENST00000345617 CCL18P55774 89 aa15.01□□□□□ -0.01
HDAC4-201ENST00000345617 A0A0J9YXV3 536 aa15.01□□□□□ -0.01
HDAC4-201ENST00000345617 COX7BP24311 80 aa15.01□□□□□ -0.01
HDAC4-201ENST00000345617 SERP2Q8N6R1 65 aa15.01□□□□□ -0.01
HDAC4-201ENST00000345617 FAM167A-AS1Q96KT0 104 aa15.01□□□□□ -0.01
HDAC4-201ENST00000345617 UNQ6494/PRO21346Q6UXR6 183 aa15.01□□□□□ -0.01
HDAC4-201ENST00000345617 IGKV1OR2-108A0A075B7D4 117 aa15.01□□□□□ -0.01
HDAC4-201ENST00000345617 TMEM105Q8N8V8 129 aa15□□□□□ -0.01
HDAC4-201ENST00000345617 B9D2Q9BPU9 175 aa15□□□□□ -0.01
HDAC4-201ENST00000345617 TMEM89A2RUT3 159 aa15□□□□□ -0.01
HDAC4-201ENST00000345617 PRR30Q53SZ7 412 aaPredicted RBP14.99□□□□□ -0.01
HDAC4-201ENST00000345617 CCL24O00175 119 aa14.99□□□□□ -0.01
HDAC4-201ENST00000345617 H0Y9J4 135 aa14.99□□□□□ -0.01
HDAC4-201ENST00000345617 Q6ZQT7 251 aa14.99□□□□□ -0.01
HDAC4-201ENST00000345617 C17orf77Q96MU5 243 aa14.99□□□□□ -0.01
HDAC4-201ENST00000345617 K7EIM0 57 aa14.99□□□□□ -0.01
HDAC4-201ENST00000345617 PTH2Q96A98 100 aa14.99□□□□□ -0.01
HDAC4-201ENST00000345617 IGHV3-30-3P0DP02 117 aa14.99□□□□□ -0.01
HDAC4-201ENST00000345617 C9orf66Q5T8R8 295 aa14.98□□□□□ -0.01
HDAC4-201ENST00000345617 PRB1P04280 392 aa14.98□□□□□ -0.01
HDAC4-201ENST00000345617 LTBP2Q14767 1821 aa14.98□□□□□ -0.01
HDAC4-201ENST00000345617 K7EMT4 169 aa14.97□□□□□ -0.01
HDAC4-201ENST00000345617 LY6HO94772 140 aa14.97□□□□□ -0.01
HDAC4-201ENST00000345617 RPL39P62891 51 aaKnown RBP14.97□□□□□ -0.01
HDAC4-201ENST00000345617 DAND5Q8N907 189 aa14.97□□□□□ -0.01
HDAC4-201ENST00000345617 ODF3Q96PU9 254 aa14.97□□□□□ -0.01
HDAC4-201ENST00000345617 HHLA3Q9XRX5 114 aa14.97□□□□□ -0.01
HDAC4-201ENST00000345617 SPRY4Q9C004 299 aa14.97□□□□□ -0.01
HDAC4-201ENST00000345617 IGKV1-17P01599 117 aa14.97□□□□□ -0.01
HDAC4-201ENST00000345617 TMEM263Q8WUH6 116 aaKnown RBP14.97□□□□□ -0.01
HDAC4-201ENST00000345617 LINC00173Q6ZV60 143 aa14.96□□□□□ -0.01
HDAC4-201ENST00000345617 RNF223E7ERA6 249 aa14.96□□□□□ -0.01
HDAC4-201ENST00000345617 MT-ATP8P03928 68 aa14.96□□□□□ -0.01
HDAC4-201ENST00000345617 NUPR1O60356 82 aa14.96□□□□□ -0.01
HDAC4-201ENST00000345617 GATA1P15976 413 aaPredicted RBP14.96□□□□□ -0.01
HDAC4-201ENST00000345617 BLCAPP62952 87 aa14.96□□□□□ -0.01
HDAC4-201ENST00000345617 KRTAP27-1Q3LI81 207 aa14.96□□□□□ -0.01
HDAC4-201ENST00000345617 ASPHD1Q5U4P2 390 aa14.95□□□□□ -0.02
HDAC4-201ENST00000345617 MIR7-3HGQ8N6C7 128 aa14.95□□□□□ -0.02
HDAC4-201ENST00000345617 UFSP1Q6NVU6 142 aa14.95□□□□□ -0.02
HDAC4-201ENST00000345617 IGLC6P0CF74 106 aa14.95□□□□□ -0.02
HDAC4-201ENST00000345617 LRRC75A-AS1Q8N1F1 130 aa14.95□□□□□ -0.02
HDAC4-201ENST00000345617 WISP1O95388 367 aa14.94□□□□□ -0.02
HDAC4-201ENST00000345617 FAM19A3Q7Z5A8 133 aa14.94□□□□□ -0.02
HDAC4-201ENST00000345617 MPLKIPQ8TAP9 179 aa14.94□□□□□ -0.02
HDAC4-201ENST00000345617 CTSGP08311 255 aa14.94□□□□□ -0.02
HDAC4-201ENST00000345617 A0A1B0GXF2 115 aa14.94□□□□□ -0.02
HDAC4-201ENST00000345617 C2orf70A6NJV1 201 aa14.94□□□□□ -0.02
HDAC4-201ENST00000345617 TIMM17BO60830 172 aa14.93□□□□□ -0.02
HDAC4-201ENST00000345617 SDIM1Q6ZPB5 146 aa14.93□□□□□ -0.02
HDAC4-201ENST00000345617 MUC7Q8TAX7 377 aa14.93□□□□□ -0.02
HDAC4-201ENST00000345617 SPAG11BQ08648 103 aa14.93□□□□□ -0.02
HDAC4-201ENST00000345617 C19orf71A6NCJ1 209 aa14.93□□□□□ -0.02
HDAC4-201ENST00000345617 C20orf197Q8N268 126 aa14.93□□□□□ -0.02
HDAC4-201ENST00000345617 RSPO1Q2MKA7 263 aaPredicted RBP14.93□□□□□ -0.02
HDAC4-201ENST00000345617 A6NED7 52 aa14.93□□□□□ -0.02
HDAC4-201ENST00000345617 A0A096LPF7 62 aa14.92□□□□□ -0.02
HDAC4-201ENST00000345617 TRBV30A0A0K0K1B3 111 aa14.92□□□□□ -0.02
HDAC4-201ENST00000345617 IGLV10-54A0A075B6I4 117 aa14.92□□□□□ -0.02
HDAC4-201ENST00000345617 ABCA12Q86UK0 2595 aa14.91□□□□□ -0.02
HDAC4-201ENST00000345617 IGKV2D-26A0A0A0MRZ7 120 aa14.91□□□□□ -0.02
HDAC4-201ENST00000345617 GPHB5Q86YW7 130 aa14.91□□□□□ -0.02
HDAC4-201ENST00000345617 NAV2Q8IVL1 2488 aa14.91□□□□□ -0.02
HDAC4-201ENST00000345617 C20orf203Q8NBC4 194 aa14.91□□□□□ -0.02
HDAC4-201ENST00000345617 PRB2P02812 416 aaPredicted RBP14.91□□□□□ -0.02
HDAC4-201ENST00000345617 NCR3O14931 201 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms