RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 RBMY1EA6NEQ0 496 aaKnown RBP15.74■□□□□ 0.11
CCDC38-201ENST00000344280 RBMY1DP0C7P1 496 aaKnown RBP15.74■□□□□ 0.11
CCDC38-201ENST00000344280 RIPPLY3P57055 190 aa15.74■□□□□ 0.11
CCDC38-201ENST00000344280 KLHL30-AS1Q8NEE0 82 aa15.74■□□□□ 0.11
CCDC38-201ENST00000344280 VPS25Q9BRG1 176 aa15.74■□□□□ 0.11
CCDC38-201ENST00000344280 FABP2P12104 132 aa15.74■□□□□ 0.11
CCDC38-201ENST00000344280 KHDC1LQ5JSQ8 128 aa15.74■□□□□ 0.11
CCDC38-201ENST00000344280 TMEM61Q8N0U2 210 aa15.74■□□□□ 0.11
CCDC38-201ENST00000344280 OPRPNQ99935 248 aaPredicted RBP15.74■□□□□ 0.11
CCDC38-201ENST00000344280 PMVKQ15126 192 aa15.73■□□□□ 0.11
CCDC38-201ENST00000344280 LINC01619G3V211 115 aa15.73■□□□□ 0.11
CCDC38-201ENST00000344280 TAL2Q16559 108 aa15.73■□□□□ 0.11
CCDC38-201ENST00000344280 PLEKHB2Q96CS7 222 aa15.73■□□□□ 0.11
CCDC38-201ENST00000344280 TIMM17AQ99595 171 aa15.72■□□□□ 0.11
CCDC38-201ENST00000344280 IGHV3-73A0A0B4J1V6 119 aa15.71■□□□□ 0.11
CCDC38-201ENST00000344280 ZNF815PA8K554 130 aa15.71■□□□□ 0.11
CCDC38-201ENST00000344280 H3BMM0 161 aa15.71■□□□□ 0.11
CCDC38-201ENST00000344280 P0DMU3 169 aa15.71■□□□□ 0.11
CCDC38-201ENST00000344280 FAM231AP0DMU4 169 aa15.71■□□□□ 0.11
CCDC38-201ENST00000344280 FAM231CP0DMU5 169 aa15.71■□□□□ 0.11
CCDC38-201ENST00000344280 C12orf74Q32Q52 190 aa15.71■□□□□ 0.11
CCDC38-201ENST00000344280 ZNRF2Q8NHG8 242 aa15.71■□□□□ 0.11
CCDC38-201ENST00000344280 DLX4Q92988 240 aaPredicted RBP15.71■□□□□ 0.11
CCDC38-201ENST00000344280 SAP30O75446 220 aa15.71■□□□□ 0.11
CCDC38-201ENST00000344280 PROK1P58294 105 aa15.71■□□□□ 0.11
CCDC38-201ENST00000344280 TMEM141Q96I45 108 aa15.71■□□□□ 0.11
CCDC38-201ENST00000344280 TRGV11A0A075B6L2 103 aa15.7■□□□□ 0.1
CCDC38-201ENST00000344280 K7ERU9 68 aa15.7■□□□□ 0.1
CCDC38-201ENST00000344280 TRPT1Q86TN4 253 aaKnown RBP15.7■□□□□ 0.1
CCDC38-201ENST00000344280 LRRC75A-AS1Q8N1F1 130 aa15.7■□□□□ 0.1
CCDC38-201ENST00000344280 WNK1Q9H4A3 2382 aa15.69■□□□□ 0.1
CCDC38-201ENST00000344280 FLNAP21333 2647 aaKnown RBP15.69■□□□□ 0.1
CCDC38-201ENST00000344280 IGLL5B9A064 214 aa15.69■□□□□ 0.1
CCDC38-201ENST00000344280 C4orf3Q8WVX3 66 aa15.69■□□□□ 0.1
CCDC38-201ENST00000344280 SETD2Q9BYW2 2564 aaPredicted RBP15.68■□□□□ 0.1
CCDC38-201ENST00000344280 NSUN5P1Q3KNT7 163 aa15.68■□□□□ 0.1
CCDC38-201ENST00000344280 LINC01549A6NIU2 74 aa15.67■□□□□ 0.1
CCDC38-201ENST00000344280 TSPEAR-AS2P59090 65 aa15.67■□□□□ 0.1
CCDC38-201ENST00000344280 SCGB2A2Q13296 93 aa15.67■□□□□ 0.1
CCDC38-201ENST00000344280 OR5A1Q8NGJ0 315 aa15.67■□□□□ 0.1
CCDC38-201ENST00000344280 Q9UF83 564 aa15.67■□□□□ 0.1
CCDC38-201ENST00000344280 A8MTW9 85 aa15.66■□□□□ 0.1
CCDC38-201ENST00000344280 TMEM170BQ5T4T1 132 aa15.66■□□□□ 0.1
CCDC38-201ENST00000344280 SCGB1D4Q6XE38 83 aa15.66■□□□□ 0.1
CCDC38-201ENST00000344280 NACAE9PAV3 2078 aa15.65■□□□□ 0.1
CCDC38-201ENST00000344280 WFDC11Q8NEX6 87 aa15.65■□□□□ 0.1
CCDC38-201ENST00000344280 MAP6D1Q9H9H5 199 aa15.65■□□□□ 0.1
CCDC38-201ENST00000344280 PEMTQ9UBM1 199 aa15.65■□□□□ 0.1
CCDC38-201ENST00000344280 I3L3M4 83 aa15.65■□□□□ 0.1
CCDC38-201ENST00000344280 RHOHQ15669 191 aa15.65■□□□□ 0.1
CCDC38-201ENST00000344280 C20orf203Q8NBC4 194 aa15.65■□□□□ 0.1
CCDC38-201ENST00000344280 PAPPA-AS1Q5QFB9 102 aa15.64■□□□□ 0.09
CCDC38-201ENST00000344280 C11orf44Q8N8P7 122 aa15.64■□□□□ 0.09
CCDC38-201ENST00000344280 ZNF479Q96JC4 524 aa15.64■□□□□ 0.09
CCDC38-201ENST00000344280 TENM4Q6N022 2769 aa15.64■□□□□ 0.09
CCDC38-201ENST00000344280 Q6ZSV7 163 aa15.64■□□□□ 0.09
CCDC38-201ENST00000344280 DEFB114Q30KQ6 69 aa15.63■□□□□ 0.09
CCDC38-201ENST00000344280 HIST2H2BCQ6DN03 193 aa15.63■□□□□ 0.09
CCDC38-201ENST00000344280 DYNLRB2Q8TF09 96 aa15.63■□□□□ 0.09
CCDC38-201ENST00000344280 A0A1B0GWB2 263 aa15.63■□□□□ 0.09
CCDC38-201ENST00000344280 Q6ZSN1 163 aa15.63■□□□□ 0.09
CCDC38-201ENST00000344280 SPAG8Q99932 426 aaPredicted RBP15.63■□□□□ 0.09
CCDC38-201ENST00000344280 NIPBLQ6KC79 2804 aaeCLIP15.62■□□□□ 0.09
CCDC38-201ENST00000344280 CIDEAO60543 219 aa15.62■□□□□ 0.09
CCDC38-201ENST00000344280 HERVK_113P61574 105 aa15.62■□□□□ 0.09
CCDC38-201ENST00000344280 ACANP16112 2415 aa15.61■□□□□ 0.09
CCDC38-201ENST00000344280 TMEM238C9JI98 176 aa15.61■□□□□ 0.09
CCDC38-201ENST00000344280 TRAV2A0A0B4J234 112 aa15.6■□□□□ 0.09
CCDC38-201ENST00000344280 A0A0J9YY99 117 aa15.6■□□□□ 0.09
CCDC38-201ENST00000344280 SRSF9Q13242 221 aaKnown RBP eCLIP15.6■□□□□ 0.09
CCDC38-201ENST00000344280 AMELXQ99217 191 aa15.6■□□□□ 0.09
CCDC38-201ENST00000344280 IGLV4-3A0A075B6K6 122 aa15.59■□□□□ 0.09
CCDC38-201ENST00000344280 M0R2P5 195 aa15.59■□□□□ 0.09
CCDC38-201ENST00000344280 RRN3P1Q2M238 152 aa15.59■□□□□ 0.09
CCDC38-201ENST00000344280 A0A1W2PRX2 142 aa15.59■□□□□ 0.09
CCDC38-201ENST00000344280 DNAJC9-AS1A6NH13 148 aa15.59■□□□□ 0.09
CCDC38-201ENST00000344280 NFE4Q86UQ8 179 aa15.59■□□□□ 0.09
CCDC38-201ENST00000344280 FAM104AQ969W3 186 aa15.59■□□□□ 0.09
CCDC38-201ENST00000344280 RAX2Q96IS3 184 aa15.59■□□□□ 0.09
CCDC38-201ENST00000344280 CEMP1Q6PRD7 247 aaPredicted RBP15.58■□□□□ 0.08
CCDC38-201ENST00000344280 LINC01587Q99440 93 aa15.58■□□□□ 0.08
CCDC38-201ENST00000344280 ESM1Q9NQ30 184 aa15.58■□□□□ 0.08
CCDC38-201ENST00000344280 CD28P10747 220 aa15.57■□□□□ 0.08
CCDC38-201ENST00000344280 C11orf72Q8NBR9 251 aa15.57■□□□□ 0.08
CCDC38-201ENST00000344280 IGHV3-64A0A075B6Q5 118 aa15.57■□□□□ 0.08
CCDC38-201ENST00000344280 H3BMG7 143 aa15.57■□□□□ 0.08
CCDC38-201ENST00000344280 EDA2RQ9HAV5 297 aa15.57■□□□□ 0.08
CCDC38-201ENST00000344280 MTORP42345 2549 aa15.56■□□□□ 0.08
CCDC38-201ENST00000344280 A0A0J9YXV3 536 aa15.56■□□□□ 0.08
CCDC38-201ENST00000344280 J3QQQ9 107 aa15.56■□□□□ 0.08
CCDC38-201ENST00000344280 CFAP126Q5VTH2 177 aa15.56■□□□□ 0.08
CCDC38-201ENST00000344280 NOTCH3Q9UM47 2321 aa15.56■□□□□ 0.08
CCDC38-201ENST00000344280 ZNF415Q09FC8 603 aa15.56■□□□□ 0.08
CCDC38-201ENST00000344280 MRPL16Q9NX20 251 aaKnown RBP15.56■□□□□ 0.08
CCDC38-201ENST00000344280 A8MWV9 139 aa15.55■□□□□ 0.08
CCDC38-201ENST00000344280 ODF3L2Q3SX64 289 aa15.55■□□□□ 0.08
CCDC38-201ENST00000344280 PGPEP1Q9NXJ5 209 aa15.55■□□□□ 0.08
CCDC38-201ENST00000344280 TMEM223A0PJW6 202 aa15.55■□□□□ 0.08
CCDC38-201ENST00000344280 ZNF22P17026 224 aaPredicted RBP15.55■□□□□ 0.08
CCDC38-201ENST00000344280 RNASE13Q5GAN3 156 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms