RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 M0QXV9 152 aa3.63□□□□□ -1.83
CSMD3-203ENST00000343508 COX7A2LO14548 114 aa3.63□□□□□ -1.83
CSMD3-203ENST00000343508 ELANEP08246 267 aa3.63□□□□□ -1.83
CSMD3-203ENST00000343508 NFE4Q86UQ8 179 aa3.63□□□□□ -1.83
CSMD3-203ENST00000343508 AJUBAQ96IF1 538 aa3.63□□□□□ -1.83
CSMD3-203ENST00000343508 PRR30Q53SZ7 412 aaPredicted RBP3.63□□□□□ -1.83
CSMD3-203ENST00000343508 PYGO1Q9Y3Y4 419 aa3.63□□□□□ -1.83
CSMD3-203ENST00000343508 TNCP24821 2201 aa3.63□□□□□ -1.83
CSMD3-203ENST00000343508 FAM240AA0A1B0GVK7 77 aa3.63□□□□□ -1.83
CSMD3-203ENST00000343508 ODF3BA8MYP8 253 aa3.63□□□□□ -1.83
CSMD3-203ENST00000343508 GPHB5Q86YW7 130 aa3.63□□□□□ -1.83
CSMD3-203ENST00000343508 COX7B2Q8TF08 81 aa3.63□□□□□ -1.83
CSMD3-203ENST00000343508 HOXD3P31249 432 aaPredicted RBP3.63□□□□□ -1.83
CSMD3-203ENST00000343508 TMEM89A2RUT3 159 aa3.63□□□□□ -1.83
CSMD3-203ENST00000343508 NDUFC2O95298 119 aa3.63□□□□□ -1.83
CSMD3-203ENST00000343508 INSL3P51460 131 aa3.63□□□□□ -1.83
CSMD3-203ENST00000343508 ZFAND3Q9H8U3 227 aa3.63□□□□□ -1.83
CSMD3-203ENST00000343508 LINC01546A6NGU7 62 aa3.62□□□□□ -1.83
CSMD3-203ENST00000343508 SPRY2O43597 315 aa3.62□□□□□ -1.83
CSMD3-203ENST00000343508 TMEM61Q8N0U2 210 aa3.62□□□□□ -1.83
CSMD3-203ENST00000343508 U3KQE9 123 aa3.62□□□□□ -1.83
CSMD3-203ENST00000343508 CCDC140Q96MF4 163 aa3.62□□□□□ -1.83
CSMD3-203ENST00000343508 IGLV4-3A0A075B6K6 122 aa3.62□□□□□ -1.83
CSMD3-203ENST00000343508 PSMB8P28062 276 aa3.62□□□□□ -1.83
CSMD3-203ENST00000343508 CXCL5P42830 114 aa3.62□□□□□ -1.83
CSMD3-203ENST00000343508 DAND5Q8N907 189 aa3.62□□□□□ -1.83
CSMD3-203ENST00000343508 HTTP42858 3142 aa3.62□□□□□ -1.83
CSMD3-203ENST00000343508 IGHV4OR15-8A0A075B7B6 117 aa3.62□□□□□ -1.83
CSMD3-203ENST00000343508 A0A087WW49 117 aa3.62□□□□□ -1.83
CSMD3-203ENST00000343508 TRBV6-5A0A0K0K1A5 114 aa3.62□□□□□ -1.83
CSMD3-203ENST00000343508 FBXL19-AS1Q494R0 122 aa3.62□□□□□ -1.83
CSMD3-203ENST00000343508 ZNF561-AS1K7EIQ3 104 aa3.62□□□□□ -1.83
CSMD3-203ENST00000343508 PSMG3-AS1Q96PY0 264 aa3.62□□□□□ -1.83
CSMD3-203ENST00000343508 H7C423 109 aa3.62□□□□□ -1.83
CSMD3-203ENST00000343508 NDUFA7O95182 113 aa3.62□□□□□ -1.83
CSMD3-203ENST00000343508 LST1O00453 97 aa3.62□□□□□ -1.83
CSMD3-203ENST00000343508 UBE2D1P51668 147 aa3.62□□□□□ -1.83
CSMD3-203ENST00000343508 C11orf44Q8N8P7 122 aa3.62□□□□□ -1.83
CSMD3-203ENST00000343508 A0A1W2PNU3 283 aaPredicted RBP3.62□□□□□ -1.83
CSMD3-203ENST00000343508 A0A096LNJ9 63 aa3.61□□□□□ -1.83
CSMD3-203ENST00000343508 MRPS12O15235 138 aaKnown RBP3.61□□□□□ -1.83
CSMD3-203ENST00000343508 UNQ9165/PRO28630Q6UXU0 137 aa3.61□□□□□ -1.83
CSMD3-203ENST00000343508 RBM3P98179 157 aaKnown RBP3.61□□□□□ -1.83
CSMD3-203ENST00000343508 VPREB3Q9UKI3 123 aa3.61□□□□□ -1.83
CSMD3-203ENST00000343508 SIRPDQ9H106 197 aa3.61□□□□□ -1.83
CSMD3-203ENST00000343508 SPEGQ15772 3267 aa3.61□□□□□ -1.83
CSMD3-203ENST00000343508 DSCAML1Q8TD84 2053 aa3.61□□□□□ -1.83
CSMD3-203ENST00000343508 TRBV10-1A0A0K0K1A3 114 aa3.61□□□□□ -1.83
CSMD3-203ENST00000343508 TMEM263Q8WUH6 116 aaKnown RBP3.61□□□□□ -1.83
CSMD3-203ENST00000343508 CELSR3Q9NYQ7 3312 aa3.61□□□□□ -1.83
CSMD3-203ENST00000343508 TRAV4A0A0B4J268 109 aa3.61□□□□□ -1.83
CSMD3-203ENST00000343508 IGF1P05019 195 aa3.61□□□□□ -1.83
CSMD3-203ENST00000343508 ZFAND2AQ8N6M9 145 aa3.61□□□□□ -1.83
CSMD3-203ENST00000343508 PLXNB1O43157 2135 aa3.61□□□□□ -1.83
CSMD3-203ENST00000343508 M0QY20 66 aa3.61□□□□□ -1.83
CSMD3-203ENST00000343508 EBI3Q14213 229 aa3.61□□□□□ -1.83
CSMD3-203ENST00000343508 MIR7-3HGQ8N6C7 128 aa3.61□□□□□ -1.83
CSMD3-203ENST00000343508 LINC00308Q8TCZ7 52 aa3.61□□□□□ -1.83
CSMD3-203ENST00000343508 NDUFA1O15239 70 aa3.6□□□□□ -1.83
CSMD3-203ENST00000343508 COX7CP15954 63 aa3.6□□□□□ -1.83
CSMD3-203ENST00000343508 PDE6GP18545 87 aa3.6□□□□□ -1.83
CSMD3-203ENST00000343508 C1orf43Q9BWL3 253 aa3.6□□□□□ -1.83
CSMD3-203ENST00000343508 IGKV3D-7A0A0C4DH55 119 aa3.6□□□□□ -1.83
CSMD3-203ENST00000343508 RPL35AP18077 110 aaKnown RBP3.6□□□□□ -1.83
CSMD3-203ENST00000343508 MRPS36P82909 103 aaKnown RBP3.6□□□□□ -1.83
CSMD3-203ENST00000343508 OPRPNQ99935 248 aaPredicted RBP3.6□□□□□ -1.83
CSMD3-203ENST00000343508 C16orf74Q96GX8 76 aa3.6□□□□□ -1.83
CSMD3-203ENST00000343508 DEFB130BP0DP73 79 aa3.6□□□□□ -1.83
CSMD3-203ENST00000343508 DEFB130AP0DP74 79 aa3.6□□□□□ -1.83
CSMD3-203ENST00000343508 RNASE3P12724 160 aaKnown RBP3.6□□□□□ -1.83
CSMD3-203ENST00000343508 TIRAPP58753 221 aa3.6□□□□□ -1.83
CSMD3-203ENST00000343508 LY6DQ14210 128 aa3.6□□□□□ -1.83
CSMD3-203ENST00000343508 NOP10Q9NPE3 64 aaKnown RBP3.6□□□□□ -1.83
CSMD3-203ENST00000343508 C14orf132Q9NPU4 83 aa3.6□□□□□ -1.83
CSMD3-203ENST00000343508 ZNF22P17026 224 aaPredicted RBP3.6□□□□□ -1.83
CSMD3-203ENST00000343508 RS1O15537 224 aa3.6□□□□□ -1.83
CSMD3-203ENST00000343508 ARFGEF3Q5TH69 2177 aa3.6□□□□□ -1.83
CSMD3-203ENST00000343508 IGLV2-18A0A075B6J9 118 aa3.6□□□□□ -1.83
CSMD3-203ENST00000343508 IGIPA6NJ69 53 aa3.6□□□□□ -1.83
CSMD3-203ENST00000343508 LECT2O14960 151 aa3.6□□□□□ -1.83
CSMD3-203ENST00000343508 ATP5EP2Q5VTU8 51 aa3.6□□□□□ -1.83
CSMD3-203ENST00000343508 XCL1P47992 114 aa3.6□□□□□ -1.83
CSMD3-203ENST00000343508 POLR2KP53803 58 aaKnown RBP3.59□□□□□ -1.83
CSMD3-203ENST00000343508 CFHR3Q02985 330 aa3.59□□□□□ -1.83
CSMD3-203ENST00000343508 LRRC75A-AS1Q8N1F1 130 aa3.59□□□□□ -1.83
CSMD3-203ENST00000343508 CCDC179H3BU77 68 aa3.59□□□□□ -1.83
CSMD3-203ENST00000343508 BLCAPP62952 87 aa3.59□□□□□ -1.83
CSMD3-203ENST00000343508 Q6ZS46 218 aa3.59□□□□□ -1.83
CSMD3-203ENST00000343508 NXPH4O95158 308 aa3.59□□□□□ -1.83
CSMD3-203ENST00000343508 MRAPQ8TCY5 172 aa3.59□□□□□ -1.83
CSMD3-203ENST00000343508 ZFP36P26651 326 aaKnown RBP3.59□□□□□ -1.83
CSMD3-203ENST00000343508 RPL18AQ02543 176 aaKnown RBP3.59□□□□□ -1.83
CSMD3-203ENST00000343508 CADP27708 2225 aa3.59□□□□□ -1.83
CSMD3-203ENST00000343508 TPRP12270 2363 aaKnown RBP3.59□□□□□ -1.83
CSMD3-203ENST00000343508 ANGP03950 147 aaKnown RBP3.59□□□□□ -1.83
CSMD3-203ENST00000343508 HIGD2BQ4VC39 106 aa3.59□□□□□ -1.83
CSMD3-203ENST00000343508 NDUFC1O43677 76 aa3.59□□□□□ -1.84
CSMD3-203ENST00000343508 PIK3CD-AS1Q5SR53 167 aa3.59□□□□□ -1.84
CSMD3-203ENST00000343508 SDIM1Q6ZPB5 146 aa3.59□□□□□ -1.84
CSMD3-203ENST00000343508 SPTBN5Q9NRC6 3674 aaKnown RBP3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms