RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 PRKDCP78527 4128 aaKnown RBP11.52□□□□□ -0.57
SNED1-202ENST00000342631 F5H768 121 aa11.51□□□□□ -0.57
SNED1-202ENST00000342631 HOXA5P20719 270 aa11.51□□□□□ -0.57
SNED1-202ENST00000342631 TRBV6-5A0A0K0K1A5 114 aa11.5□□□□□ -0.57
SNED1-202ENST00000342631 C1orf196B1AJZ1 125 aa11.5□□□□□ -0.57
SNED1-202ENST00000342631 CRYBA4P53673 196 aa11.5□□□□□ -0.57
SNED1-202ENST00000342631 NRACQ8N912 160 aa11.5□□□□□ -0.57
SNED1-202ENST00000342631 FBN3Q75N90 2809 aa11.5□□□□□ -0.57
SNED1-202ENST00000342631 TRAV10A0A0B4J240 114 aa11.5□□□□□ -0.57
SNED1-202ENST00000342631 SMKR1H3BMG3 65 aa11.5□□□□□ -0.57
SNED1-202ENST00000342631 TNFRSF6BO95407 300 aa11.5□□□□□ -0.57
SNED1-202ENST00000342631 NCR2O95944 276 aa11.5□□□□□ -0.57
SNED1-202ENST00000342631 SRIP30626 198 aa11.5□□□□□ -0.57
SNED1-202ENST00000342631 OR10J3Q5JRS4 329 aa11.5□□□□□ -0.57
SNED1-202ENST00000342631 C20orf78Q9BR46 151 aa11.5□□□□□ -0.57
SNED1-202ENST00000342631 H3BNG1 76 aa11.49□□□□□ -0.57
SNED1-202ENST00000342631 HTN3P15516 51 aa11.49□□□□□ -0.57
SNED1-202ENST00000342631 STAB2Q8WWQ8 2551 aa11.49□□□□□ -0.57
SNED1-202ENST00000342631 DEFB131BA0A096LNP1 70 aa11.48□□□□□ -0.57
SNED1-202ENST00000342631 TNFRSF18Q9Y5U5 241 aa11.48□□□□□ -0.57
SNED1-202ENST00000342631 PAX4O43316 350 aa11.48□□□□□ -0.57
SNED1-202ENST00000342631 GAS8-AS1O95177 125 aa11.48□□□□□ -0.57
SNED1-202ENST00000342631 NPYP01303 97 aa11.48□□□□□ -0.57
SNED1-202ENST00000342631 RPL32P62910 135 aaKnown RBP11.48□□□□□ -0.57
SNED1-202ENST00000342631 RPL36AP83881 106 aaKnown RBP11.48□□□□□ -0.57
SNED1-202ENST00000342631 NEXN-AS1Q8NBZ9 246 aa11.48□□□□□ -0.57
SNED1-202ENST00000342631 RPL36ALQ969Q0 106 aaKnown RBP11.48□□□□□ -0.57
SNED1-202ENST00000342631 ST20Q9HBF5 79 aa11.48□□□□□ -0.57
SNED1-202ENST00000342631 TRBV7-3A0A075B6L6 115 aa11.47□□□□□ -0.57
SNED1-202ENST00000342631 SUMO2P61956 95 aaKnown RBP11.47□□□□□ -0.57
SNED1-202ENST00000342631 RPL39LQ96EH5 51 aaKnown RBP11.47□□□□□ -0.57
SNED1-202ENST00000342631 MAP1LC3AQ9H492 121 aa11.47□□□□□ -0.57
SNED1-202ENST00000342631 RAB5BP61020 215 aa11.47□□□□□ -0.57
SNED1-202ENST00000342631 TRAV26-1A0A087WT03 109 aa11.46□□□□□ -0.58
SNED1-202ENST00000342631 P0DMU3 169 aa11.46□□□□□ -0.58
SNED1-202ENST00000342631 FAM231AP0DMU4 169 aa11.46□□□□□ -0.58
SNED1-202ENST00000342631 FAM231CP0DMU5 169 aa11.46□□□□□ -0.58
SNED1-202ENST00000342631 Q0VG73 95 aa11.45□□□□□ -0.58
SNED1-202ENST00000342631 C18orf32Q8TCD1 76 aa11.45□□□□□ -0.58
SNED1-202ENST00000342631 VSIG2Q96IQ7 327 aa11.45□□□□□ -0.58
SNED1-202ENST00000342631 SDHAF1A6NFY7 115 aa11.45□□□□□ -0.58
SNED1-202ENST00000342631 HIST1H2BKO60814 126 aa11.45□□□□□ -0.58
SNED1-202ENST00000342631 HIST1H2BJP06899 126 aa11.45□□□□□ -0.58
SNED1-202ENST00000342631 HIST1H2BOP23527 126 aa11.45□□□□□ -0.58
SNED1-202ENST00000342631 HIST1H2BBP33778 126 aa11.45□□□□□ -0.58
SNED1-202ENST00000342631 POLR2KP53803 58 aaKnown RBP11.45□□□□□ -0.58
SNED1-202ENST00000342631 HIST1H2BDP58876 126 aa11.45□□□□□ -0.58
SNED1-202ENST00000342631 HIST1H2BCP62807 126 aa11.45□□□□□ -0.58
SNED1-202ENST00000342631 HIST2H2BEQ16778 126 aa11.45□□□□□ -0.58
SNED1-202ENST00000342631 MAJINQ3KP22 176 aa11.45□□□□□ -0.58
SNED1-202ENST00000342631 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.45□□□□□ -0.58
SNED1-202ENST00000342631 SH2D6Q7Z4S9 175 aa11.45□□□□□ -0.58
SNED1-202ENST00000342631 ZNRF2Q8NHG8 242 aa11.45□□□□□ -0.58
SNED1-202ENST00000342631 HIST1H2BHQ93079 126 aa11.45□□□□□ -0.58
SNED1-202ENST00000342631 HIST1H2BNQ99877 126 aa11.45□□□□□ -0.58
SNED1-202ENST00000342631 HIST1H2BMQ99879 126 aa11.45□□□□□ -0.58
SNED1-202ENST00000342631 TMEM70Q9BUB7 260 aa11.45□□□□□ -0.58
SNED1-202ENST00000342631 NXT2Q9NPJ8 142 aaKnown RBP11.45□□□□□ -0.58
SNED1-202ENST00000342631 VCYO14598 125 aa11.44□□□□□ -0.58
SNED1-202ENST00000342631 SMIM6P0DI80 62 aa11.44□□□□□ -0.58
SNED1-202ENST00000342631 GYPEP15421 78 aa11.44□□□□□ -0.58
SNED1-202ENST00000342631 PMCHP20382 165 aa11.44□□□□□ -0.58
SNED1-202ENST00000342631 PHLDA1Q8WV24 401 aaPredicted RBP11.44□□□□□ -0.58
SNED1-202ENST00000342631 TRBV27A0A0K0K1C4 114 aa11.43□□□□□ -0.58
SNED1-202ENST00000342631 UBE2D3P61077 147 aa11.43□□□□□ -0.58
SNED1-202ENST00000342631 UBE2D2P62837 147 aa11.43□□□□□ -0.58
SNED1-202ENST00000342631 MRPL23Q16540 153 aaKnown RBP11.43□□□□□ -0.58
SNED1-202ENST00000342631 DAZ4Q86SG3 579 aaKnown RBP11.43□□□□□ -0.58
SNED1-202ENST00000342631 SMIM2Q9BVW6 85 aa11.43□□□□□ -0.58
SNED1-202ENST00000342631 DAZ3Q9NR90 486 aaKnown RBP11.43□□□□□ -0.58
SNED1-202ENST00000342631 Q9UF83 564 aa11.43□□□□□ -0.58
SNED1-202ENST00000342631 A0A0J9YY99 117 aa11.43□□□□□ -0.58
SNED1-202ENST00000342631 GAGE12JA6NER3 117 aa11.43□□□□□ -0.58
SNED1-202ENST00000342631 TCAPO15273 167 aa11.43□□□□□ -0.58
SNED1-202ENST00000342631 LINC00694P0DN24 101 aa11.43□□□□□ -0.58
SNED1-202ENST00000342631 GAGE1Q13065 139 aa11.43□□□□□ -0.58
SNED1-202ENST00000342631 GAGE4Q13068 117 aa11.43□□□□□ -0.58
SNED1-202ENST00000342631 GAGE5Q13069 117 aa11.43□□□□□ -0.58
SNED1-202ENST00000342631 GAGE13Q4V321 117 aa11.43□□□□□ -0.58
SNED1-202ENST00000342631 ICOSQ9Y6W8 199 aa11.43□□□□□ -0.58
SNED1-202ENST00000342631 K7EMI3 77 aa11.42□□□□□ -0.58
SNED1-202ENST00000342631 Q8N8P6 123 aa11.42□□□□□ -0.58
SNED1-202ENST00000342631 PRSS3P2Q8NHM4 247 aa11.42□□□□□ -0.58
SNED1-202ENST00000342631 CHTOPQ9Y3Y2 248 aaKnown RBP11.42□□□□□ -0.58
SNED1-202ENST00000342631 LOC100131303A0A0U1RQF7 123 aa11.41□□□□□ -0.58
SNED1-202ENST00000342631 I3L3M4 83 aa11.41□□□□□ -0.58
SNED1-202ENST00000342631 C15orf53Q8NAA6 179 aa11.41□□□□□ -0.58
SNED1-202ENST00000342631 KIR2DL4Q99706 377 aa11.41□□□□□ -0.58
SNED1-202ENST00000342631 LOC389332A0A1B0GUA5 103 aa11.41□□□□□ -0.58
SNED1-202ENST00000342631 IGLV2-18A0A075B6J9 118 aa11.4□□□□□ -0.58
SNED1-202ENST00000342631 TMEM97Q5BJF2 176 aa11.4□□□□□ -0.58
SNED1-202ENST00000342631 BAGE3Q86Y29 109 aa11.4□□□□□ -0.58
SNED1-202ENST00000342631 NUPR2A6NF83 97 aa11.39□□□□□ -0.59
SNED1-202ENST00000342631 LINC00587B1AMM8 73 aa11.39□□□□□ -0.59
SNED1-202ENST00000342631 IFI27P40305 119 aaPredicted RBP11.39□□□□□ -0.59
SNED1-202ENST00000342631 IQCJQ1A5X6 159 aa11.39□□□□□ -0.59
SNED1-202ENST00000342631 ATP6V0E2Q8NHE4 81 aa11.39□□□□□ -0.59
SNED1-202ENST00000342631 LINC01546A6NGU7 62 aa11.39□□□□□ -0.59
SNED1-202ENST00000342631 LINC00614P0C842 121 aa11.39□□□□□ -0.59
SNED1-202ENST00000342631 FA2HQ7L5A8 372 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms