RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 EDA2RQ9HAV5 297 aa14.44□□□□□ -0.1
RTN1-202ENST00000342503 DKK2Q9UBU2 259 aa14.44□□□□□ -0.1
RTN1-202ENST00000342503 C2orf66Q6UXQ4 117 aa14.44□□□□□ -0.1
RTN1-202ENST00000342503 ZFP2Q6ZN57 461 aa14.44□□□□□ -0.1
RTN1-202ENST00000342503 KIR2DL4Q99706 377 aa14.44□□□□□ -0.1
RTN1-202ENST00000342503 TENM1Q9UKZ4 2725 aa14.43□□□□□ -0.1
RTN1-202ENST00000342503 CYSRT1A8MQ03 144 aa14.43□□□□□ -0.1
RTN1-202ENST00000342503 H7C1H1 209 aa14.43□□□□□ -0.1
RTN1-202ENST00000342503 ODF1Q14990 250 aa14.43□□□□□ -0.1
RTN1-202ENST00000342503 SCGB3A1Q96QR1 104 aa14.43□□□□□ -0.1
RTN1-202ENST00000342503 Q6ZSN1 163 aa14.42□□□□□ -0.1
RTN1-202ENST00000342503 JMJD1CQ15652 2540 aa14.42□□□□□ -0.1
RTN1-202ENST00000342503 TRGV1A0A0A0MS02 117 aa14.41□□□□□ -0.1
RTN1-202ENST00000342503 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.41□□□□□ -0.1
RTN1-202ENST00000342503 RHODO00212 210 aa14.41□□□□□ -0.1
RTN1-202ENST00000342503 P0DMU3 169 aa14.41□□□□□ -0.1
RTN1-202ENST00000342503 FAM231AP0DMU4 169 aa14.41□□□□□ -0.1
RTN1-202ENST00000342503 FAM231CP0DMU5 169 aa14.41□□□□□ -0.1
RTN1-202ENST00000342503 Q6ZN92 141 aa14.4□□□□□ -0.1
RTN1-202ENST00000342503 C16orf74Q96GX8 76 aa14.4□□□□□ -0.1
RTN1-202ENST00000342503 ZMAT4Q9H898 229 aa14.4□□□□□ -0.1
RTN1-202ENST00000342503 G0S2P27469 103 aa14.39□□□□□ -0.11
RTN1-202ENST00000342503 KRTAP24-1Q3LI83 254 aa14.39□□□□□ -0.11
RTN1-202ENST00000342503 CYSLTR1Q9Y271 337 aa14.39□□□□□ -0.11
RTN1-202ENST00000342503 TEP1Q99973 2627 aaKnown RBP14.39□□□□□ -0.11
RTN1-202ENST00000342503 I3L3M4 83 aa14.38□□□□□ -0.11
RTN1-202ENST00000342503 RIPPLY3P57055 190 aa14.38□□□□□ -0.11
RTN1-202ENST00000342503 Q6ZTI0 123 aa14.38□□□□□ -0.11
RTN1-202ENST00000342503 WFDC9Q8NEX5 89 aa14.38□□□□□ -0.11
RTN1-202ENST00000342503 TP53TG1Q9Y2A0 90 aa14.38□□□□□ -0.11
RTN1-202ENST00000342503 PLAC8L1A1L4L8 177 aa14.38□□□□□ -0.11
RTN1-202ENST00000342503 TSHBP01222 138 aa14.38□□□□□ -0.11
RTN1-202ENST00000342503 IGHV3-53P01767 116 aa14.38□□□□□ -0.11
RTN1-202ENST00000342503 NOP10Q9NPE3 64 aaKnown RBP14.38□□□□□ -0.11
RTN1-202ENST00000342503 VWFP04275 2813 aa14.37□□□□□ -0.11
RTN1-202ENST00000342503 A0A087WX48 190 aa14.37□□□□□ -0.11
RTN1-202ENST00000342503 HNRNPA3P51991 378 aaKnown RBP14.37□□□□□ -0.11
RTN1-202ENST00000342503 DAZ2Q13117 558 aaKnown RBP14.37□□□□□ -0.11
RTN1-202ENST00000342503 ANKRD39Q53RE8 183 aa14.37□□□□□ -0.11
RTN1-202ENST00000342503 ERASQ7Z444 233 aa14.37□□□□□ -0.11
RTN1-202ENST00000342503 STPG4Q8N801 248 aa14.37□□□□□ -0.11
RTN1-202ENST00000342503 OR4C5Q8NGB2 326 aa14.37□□□□□ -0.11
RTN1-202ENST00000342503 Q9UF83 564 aa14.37□□□□□ -0.11
RTN1-202ENST00000342503 TNFRSF18Q9Y5U5 241 aa14.37□□□□□ -0.11
RTN1-202ENST00000342503 TRAV12-1A0A0B4J245 112 aa14.36□□□□□ -0.11
RTN1-202ENST00000342503 CTAG1AP78358 180 aa14.36□□□□□ -0.11
RTN1-202ENST00000342503 RHOHQ15669 191 aa14.36□□□□□ -0.11
RTN1-202ENST00000342503 RRN3P1Q2M238 152 aa14.36□□□□□ -0.11
RTN1-202ENST00000342503 EREGO14944 169 aa14.35□□□□□ -0.11
RTN1-202ENST00000342503 IGKCP01834 107 aa14.35□□□□□ -0.11
RTN1-202ENST00000342503 RPL39P62891 51 aaKnown RBP14.35□□□□□ -0.11
RTN1-202ENST00000342503 NEXN-AS1Q8NBZ9 246 aa14.35□□□□□ -0.11
RTN1-202ENST00000342503 MRPL35Q9NZE8 188 aaKnown RBP14.35□□□□□ -0.11
RTN1-202ENST00000342503 TP73-AS1Q9UF72 201 aa14.35□□□□□ -0.11
RTN1-202ENST00000342503 LINC01549A6NIU2 74 aa14.35□□□□□ -0.11
RTN1-202ENST00000342503 DPM2O94777 84 aa14.35□□□□□ -0.11
RTN1-202ENST00000342503 BAALCQ8WXS3 180 aa14.35□□□□□ -0.11
RTN1-202ENST00000342503 SNHG12Q9BXW3 62 aa14.35□□□□□ -0.11
RTN1-202ENST00000342503 ATRQ13535 2644 aa14.35□□□□□ -0.11
RTN1-202ENST00000342503 M0R143 59 aa14.34□□□□□ -0.11
RTN1-202ENST00000342503 ZNF479Q96JC4 524 aa14.34□□□□□ -0.11
RTN1-202ENST00000342503 TRAV4A0A0B4J268 109 aa14.33□□□□□ -0.12
RTN1-202ENST00000342503 IGIPA6NJ69 53 aa14.33□□□□□ -0.12
RTN1-202ENST00000342503 SLC25A34Q6PIV7 304 aa14.33□□□□□ -0.12
RTN1-202ENST00000342503 DNAJC30Q96LL9 226 aa14.33□□□□□ -0.12
RTN1-202ENST00000342503 OVOL2Q9BRP0 275 aa14.33□□□□□ -0.12
RTN1-202ENST00000342503 KRTAP3-3Q9BYR6 98 aa14.33□□□□□ -0.12
RTN1-202ENST00000342503 KRTAP3-2Q9BYR7 98 aa14.33□□□□□ -0.12
RTN1-202ENST00000342503 TCTAP57738 103 aa14.32□□□□□ -0.12
RTN1-202ENST00000342503 COX8AP10176 69 aa14.32□□□□□ -0.12
RTN1-202ENST00000342503 HHLA3Q9XRX5 114 aa14.32□□□□□ -0.12
RTN1-202ENST00000342503 CHTOPQ9Y3Y2 248 aaKnown RBP14.32□□□□□ -0.12
RTN1-202ENST00000342503 BAHCC1Q9P281 2608 aa14.31□□□□□ -0.12
RTN1-202ENST00000342503 MRPL52Q86TS9 123 aaKnown RBP14.31□□□□□ -0.12
RTN1-202ENST00000342503 TMEM141Q96I45 108 aa14.31□□□□□ -0.12
RTN1-202ENST00000342503 GAGE12BA1L429 117 aa14.3□□□□□ -0.12
RTN1-202ENST00000342503 F8VRH5 84 aa14.3□□□□□ -0.12
RTN1-202ENST00000342503 WIPF1O43516 503 aa14.3□□□□□ -0.12
RTN1-202ENST00000342503 GAGE7O76087 117 aa14.3□□□□□ -0.12
RTN1-202ENST00000342503 GAGE12FP0CL80 117 aa14.3□□□□□ -0.12
RTN1-202ENST00000342503 GAGE12GP0CL81 117 aa14.3□□□□□ -0.12
RTN1-202ENST00000342503 GAGE12IP0CL82 117 aa14.3□□□□□ -0.12
RTN1-202ENST00000342503 C20orf203Q8NBC4 194 aa14.3□□□□□ -0.12
RTN1-202ENST00000342503 TIMM17AQ99595 171 aa14.3□□□□□ -0.12
RTN1-202ENST00000342503 MRPS16Q9Y3D3 137 aaKnown RBP14.3□□□□□ -0.12
RTN1-202ENST00000342503 PRSS29PA6NIE9 313 aa14.29□□□□□ -0.12
RTN1-202ENST00000342503 PLNP26678 52 aa14.29□□□□□ -0.12
RTN1-202ENST00000342503 C2orf88Q9BSF0 95 aa14.28□□□□□ -0.12
RTN1-202ENST00000342503 TRGV2A0A075B6R0 118 aa14.27□□□□□ -0.12
RTN1-202ENST00000342503 LBHQ53QV2 105 aaPredicted RBP14.27□□□□□ -0.12
RTN1-202ENST00000342503 ZC2HC1BQ5TFG8 222 aa14.27□□□□□ -0.12
RTN1-202ENST00000342503 PRIMA1Q86XR5 153 aa14.27□□□□□ -0.12
RTN1-202ENST00000342503 PHLDA1Q8WV24 401 aaPredicted RBP14.27□□□□□ -0.12
RTN1-202ENST00000342503 NOTCH3Q9UM47 2321 aa14.27□□□□□ -0.13
RTN1-202ENST00000342503 IGHV3-38A0A0C4DH36 116 aa14.27□□□□□ -0.13
RTN1-202ENST00000342503 K7EQD1 137 aa14.27□□□□□ -0.13
RTN1-202ENST00000342503 FGF6P10767 208 aa14.27□□□□□ -0.13
RTN1-202ENST00000342503 EMP1P54849 157 aa14.27□□□□□ -0.13
RTN1-202ENST00000342503 C3orf56Q8N813 242 aa14.27□□□□□ -0.13
RTN1-202ENST00000342503 X6R8D5 127 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms