RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 TRAV12-1A0A0B4J245 112 aa5.13□□□□□ -1.59
NUP43-201ENST00000340413 K7EQD1 137 aa5.13□□□□□ -1.59
NUP43-201ENST00000340413 PMCHL1Q16048 86 aa5.13□□□□□ -1.59
NUP43-201ENST00000340413 SPATA25Q9BR10 227 aa5.13□□□□□ -1.59
NUP43-201ENST00000340413 ANK2Q01484 3957 aa5.13□□□□□ -1.59
NUP43-201ENST00000340413 IGHV1-24A0A0C4DH33 117 aa5.13□□□□□ -1.59
NUP43-201ENST00000340413 KIAA1644Q3SXP7 199 aa5.13□□□□□ -1.59
NUP43-201ENST00000340413 TOMM6Q96B49 74 aa5.13□□□□□ -1.59
NUP43-201ENST00000340413 TIMM17AQ99595 171 aa5.13□□□□□ -1.59
NUP43-201ENST00000340413 KIR2DL4Q99706 377 aa5.13□□□□□ -1.59
NUP43-201ENST00000340413 TM2D3Q9BRN9 247 aa5.13□□□□□ -1.59
NUP43-201ENST00000340413 TMEM70Q9BUB7 260 aa5.13□□□□□ -1.59
NUP43-201ENST00000340413 SAMD10Q9BYL1 202 aa5.13□□□□□ -1.59
NUP43-201ENST00000340413 MGAM2Q2M2H8 2515 aa5.13□□□□□ -1.59
NUP43-201ENST00000340413 IQCJQ1A5X6 159 aa5.12□□□□□ -1.59
NUP43-201ENST00000340413 SPART-AS1P0CW21 52 aa5.12□□□□□ -1.59
NUP43-201ENST00000340413 ZNF56Q15929 161 aa5.12□□□□□ -1.59
NUP43-201ENST00000340413 PAPPA-AS1Q5QFB9 102 aa5.12□□□□□ -1.59
NUP43-201ENST00000340413 PRADC1Q9BSG0 188 aa5.12□□□□□ -1.59
NUP43-201ENST00000340413 MGPP08493 103 aa5.12□□□□□ -1.59
NUP43-201ENST00000340413 AMTP48728 403 aa5.12□□□□□ -1.59
NUP43-201ENST00000340413 RNASEKQ6P5S7 137 aaKnown RBP5.12□□□□□ -1.59
NUP43-201ENST00000340413 WFDC10AQ9H1F0 79 aa5.12□□□□□ -1.59
NUP43-201ENST00000340413 DKK2Q9UBU2 259 aa5.12□□□□□ -1.59
NUP43-201ENST00000340413 CSDC2Q9Y534 153 aaKnown RBP5.12□□□□□ -1.59
NUP43-201ENST00000340413 COL6A5A8TX70 2615 aa5.12□□□□□ -1.59
NUP43-201ENST00000340413 LGALS9CQ6DKI2 356 aa5.11□□□□□ -1.59
NUP43-201ENST00000340413 ZMAT4Q9H898 229 aa5.11□□□□□ -1.59
NUP43-201ENST00000340413 NHLRC4P0CG21 123 aaPredicted RBP5.11□□□□□ -1.59
NUP43-201ENST00000340413 BTF3P20290 206 aaKnown RBP5.11□□□□□ -1.59
NUP43-201ENST00000340413 IFI27P40305 119 aaPredicted RBP5.11□□□□□ -1.59
NUP43-201ENST00000340413 SSTP61278 116 aa5.11□□□□□ -1.59
NUP43-201ENST00000340413 RPL36AP83881 106 aaKnown RBP5.11□□□□□ -1.59
NUP43-201ENST00000340413 RPL36ALQ969Q0 106 aaKnown RBP5.11□□□□□ -1.59
NUP43-201ENST00000340413 MAP1LC3CQ9BXW4 147 aa5.11□□□□□ -1.59
NUP43-201ENST00000340413 TRGV1A0A0A0MS02 117 aa5.11□□□□□ -1.59
NUP43-201ENST00000340413 LEPROTL1O95214 131 aa5.11□□□□□ -1.59
NUP43-201ENST00000340413 S100A12P80511 92 aa5.11□□□□□ -1.59
NUP43-201ENST00000340413 MRPS36P82909 103 aaKnown RBP5.11□□□□□ -1.59
NUP43-201ENST00000340413 MAJINQ3KP22 176 aa5.11□□□□□ -1.59
NUP43-201ENST00000340413 OR11H2Q8NH07 326 aa5.11□□□□□ -1.59
NUP43-201ENST00000340413 SPANXA1Q9NS26 97 aa5.11□□□□□ -1.59
NUP43-201ENST00000340413 TNFRSF18Q9Y5U5 241 aa5.11□□□□□ -1.59
NUP43-201ENST00000340413 MUC4Q99102 2169 aa5.11□□□□□ -1.59
NUP43-201ENST00000340413 UBE2D3P61077 147 aa5.1□□□□□ -1.59
NUP43-201ENST00000340413 UBE2D2P62837 147 aa5.1□□□□□ -1.59
NUP43-201ENST00000340413 FAM19A3Q7Z5A8 133 aa5.1□□□□□ -1.59
NUP43-201ENST00000340413 LINC00518Q8N0U6 118 aa5.1□□□□□ -1.59
NUP43-201ENST00000340413 TRBV7-3A0A075B6L6 115 aa5.1□□□□□ -1.59
NUP43-201ENST00000340413 FABP4P15090 132 aa5.1□□□□□ -1.59
NUP43-201ENST00000340413 FHL2Q14192 279 aa5.1□□□□□ -1.59
NUP43-201ENST00000340413 MRPL52Q86TS9 123 aaKnown RBP5.1□□□□□ -1.59
NUP43-201ENST00000340413 NEXN-AS1Q8NBZ9 246 aa5.1□□□□□ -1.59
NUP43-201ENST00000340413 MRPL16Q9NX20 251 aaKnown RBP5.1□□□□□ -1.59
NUP43-201ENST00000340413 IGHV4-28A0A0C4DH34 117 aa5.1□□□□□ -1.59
NUP43-201ENST00000340413 SDHAF1A6NFY7 115 aa5.1□□□□□ -1.59
NUP43-201ENST00000340413 LINC01545Q5VT33 79 aa5.1□□□□□ -1.59
NUP43-201ENST00000340413 NOP10Q9NPE3 64 aaKnown RBP5.1□□□□□ -1.59
NUP43-201ENST00000340413 CYSLTR1Q9Y271 337 aa5.1□□□□□ -1.59
NUP43-201ENST00000340413 A0A096LNJ9 63 aa5.09□□□□□ -1.59
NUP43-201ENST00000340413 ZNF25P17030 456 aaPredicted RBP5.09□□□□□ -1.59
NUP43-201ENST00000340413 TEX43Q6ZNM6 134 aa5.09□□□□□ -1.59
NUP43-201ENST00000340413 ERASQ7Z444 233 aa5.09□□□□□ -1.59
NUP43-201ENST00000340413 PRO0255Q9UI72 69 aa5.09□□□□□ -1.59
NUP43-201ENST00000340413 F5H697 171 aa5.09□□□□□ -1.59
NUP43-201ENST00000340413 CCL25O15444 150 aa5.09□□□□□ -1.59
NUP43-201ENST00000340413 NUPR1O60356 82 aa5.09□□□□□ -1.59
NUP43-201ENST00000340413 TSHBP01222 138 aa5.09□□□□□ -1.59
NUP43-201ENST00000340413 ATP5G1P05496 136 aa5.09□□□□□ -1.59
NUP43-201ENST00000340413 OR10D4PQ8NGN7 298 aa5.09□□□□□ -1.59
NUP43-201ENST00000340413 Q6ZTI0 123 aa5.09□□□□□ -1.6
NUP43-201ENST00000340413 A0A087WWL8 130 aa5.08□□□□□ -1.6
NUP43-201ENST00000340413 G3V4G9 280 aa5.08□□□□□ -1.6
NUP43-201ENST00000340413 CHCHD7Q9BUK0 85 aa5.08□□□□□ -1.6
NUP43-201ENST00000340413 SMKR1H3BMG3 65 aa5.08□□□□□ -1.6
NUP43-201ENST00000340413 SYS1-DBNDD2H3BUS1 97 aa5.08□□□□□ -1.6
NUP43-201ENST00000340413 C20orf203Q8NBC4 194 aa5.08□□□□□ -1.6
NUP43-201ENST00000340413 B9D2Q9BPU9 175 aa5.08□□□□□ -1.6
NUP43-201ENST00000340413 TRGV2A0A075B6R0 118 aa5.08□□□□□ -1.6
NUP43-201ENST00000340413 SBSPONQ8IVN8 264 aa5.08□□□□□ -1.6
NUP43-201ENST00000340413 IFI27L1Q96BM0 104 aa5.08□□□□□ -1.6
NUP43-201ENST00000340413 MDFIQ99750 246 aa5.08□□□□□ -1.6
NUP43-201ENST00000340413 CMYA5Q8N3K9 4069 aa5.08□□□□□ -1.6
NUP43-201ENST00000340413 MUC21A0A0G2JKD1 596 aa5.07□□□□□ -1.6
NUP43-201ENST00000340413 MUC21A0A140T8X8 626 aa5.07□□□□□ -1.6
NUP43-201ENST00000340413 COTL1Q14019 142 aa5.07□□□□□ -1.6
NUP43-201ENST00000340413 RPL39LQ96EH5 51 aaKnown RBP5.07□□□□□ -1.6
NUP43-201ENST00000340413 JPT2Q9H910 190 aa5.07□□□□□ -1.6
NUP43-201ENST00000340413 K7EIL1 84 aa5.07□□□□□ -1.6
NUP43-201ENST00000340413 NUDT3O95989 172 aa5.07□□□□□ -1.6
NUP43-201ENST00000340413 C3orf79P0CE67 100 aa5.07□□□□□ -1.6
NUP43-201ENST00000340413 DAD1P61803 113 aa5.07□□□□□ -1.6
NUP43-201ENST00000340413 DEFB135Q30KP9 77 aa5.07□□□□□ -1.6
NUP43-201ENST00000340413 Q8N976 141 aa5.07□□□□□ -1.6
NUP43-201ENST00000340413 TRGV4A0A0C4DH28 118 aa5.07□□□□□ -1.6
NUP43-201ENST00000340413 IGIPA6NJ69 53 aa5.07□□□□□ -1.6
NUP43-201ENST00000340413 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.07□□□□□ -1.6
NUP43-201ENST00000340413 PLNP26678 52 aa5.07□□□□□ -1.6
NUP43-201ENST00000340413 IGHV3OR16-12A0A075B7B8 117 aa5.06□□□□□ -1.6
NUP43-201ENST00000340413 TRAV26-2A0A0B4J265 109 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms