RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 MDFICQ9P1T7 246 aa8.92□□□□□ -0.98
CCDC144CP-201ENST00000340196 MOB4Q9Y3A3 225 aa8.92□□□□□ -0.98
CCDC144CP-201ENST00000340196 SDHAF1A6NFY7 115 aa8.92□□□□□ -0.98
CCDC144CP-201ENST00000340196 IGIPA6NJ69 53 aa8.92□□□□□ -0.98
CCDC144CP-201ENST00000340196 FAM159AQ6UWV7 190 aa8.92□□□□□ -0.98
CCDC144CP-201ENST00000340196 NDUFA11Q86Y39 141 aa8.92□□□□□ -0.98
CCDC144CP-201ENST00000340196 ZFYVE26Q68DK2 2539 aa8.92□□□□□ -0.98
CCDC144CP-201ENST00000340196 TRAV4A0A0B4J268 109 aa8.91□□□□□ -0.98
CCDC144CP-201ENST00000340196 CRLF1O75462 422 aa8.91□□□□□ -0.98
CCDC144CP-201ENST00000340196 CFC1BP0CG36 223 aa8.91□□□□□ -0.98
CCDC144CP-201ENST00000340196 CFC1P0CG37 223 aa8.91□□□□□ -0.98
CCDC144CP-201ENST00000340196 GAGE2BQ13066 116 aa8.91□□□□□ -0.98
CCDC144CP-201ENST00000340196 GAGE2EQ4V326 116 aa8.91□□□□□ -0.98
CCDC144CP-201ENST00000340196 C19orf54Q5BKX5 351 aa8.91□□□□□ -0.98
CCDC144CP-201ENST00000340196 GAGE2DQ9UEU5 116 aa8.91□□□□□ -0.98
CCDC144CP-201ENST00000340196 H3BUX3 64 aa8.91□□□□□ -0.98
CCDC144CP-201ENST00000340196 ZNF688P0C7X2 276 aa8.91□□□□□ -0.98
CCDC144CP-201ENST00000340196 RNASE13Q5GAN3 156 aaKnown RBP8.91□□□□□ -0.98
CCDC144CP-201ENST00000340196 C3orf56Q8N813 242 aa8.91□□□□□ -0.98
CCDC144CP-201ENST00000340196 TRPT1Q86TN4 253 aaKnown RBP8.9□□□□□ -0.98
CCDC144CP-201ENST00000340196 TEN1Q86WV5 123 aa8.9□□□□□ -0.98
CCDC144CP-201ENST00000340196 IGHV3-73A0A0B4J1V6 119 aa8.9□□□□□ -0.98
CCDC144CP-201ENST00000340196 OVOL1O14753 267 aa8.9□□□□□ -0.98
CCDC144CP-201ENST00000340196 ELANEP08246 267 aa8.9□□□□□ -0.98
CCDC144CP-201ENST00000340196 HTN1P15515 57 aa8.9□□□□□ -0.98
CCDC144CP-201ENST00000340196 FAM19A4Q96LR4 140 aa8.9□□□□□ -0.98
CCDC144CP-201ENST00000340196 MXRA5Q9NR99 2828 aa8.9□□□□□ -0.99
CCDC144CP-201ENST00000340196 TTC32Q5I0X7 151 aa8.9□□□□□ -0.99
CCDC144CP-201ENST00000340196 EPG5Q9HCE0 2579 aa8.89□□□□□ -0.99
CCDC144CP-201ENST00000340196 IGHV4-61A0A0C4DH41 118 aa8.89□□□□□ -0.99
CCDC144CP-201ENST00000340196 IGHV3-30P01768 117 aa8.89□□□□□ -0.99
CCDC144CP-201ENST00000340196 IGHV3-30-5P0DP03 117 aa8.89□□□□□ -0.99
CCDC144CP-201ENST00000340196 POLR2KP53803 58 aaKnown RBP8.89□□□□□ -0.99
CCDC144CP-201ENST00000340196 ZNF56Q15929 161 aa8.89□□□□□ -0.99
CCDC144CP-201ENST00000340196 KLK9Q2XQG4 91 aa8.89□□□□□ -0.99
CCDC144CP-201ENST00000340196 DUX5Q96PT3 197 aa8.89□□□□□ -0.99
CCDC144CP-201ENST00000340196 UBR5O95071 2799 aaPredicted RBP8.89□□□□□ -0.99
CCDC144CP-201ENST00000340196 FAM223BA6NKX1 122 aa8.89□□□□□ -0.99
CCDC144CP-201ENST00000340196 NDUFA4O00483 81 aa8.89□□□□□ -0.99
CCDC144CP-201ENST00000340196 IGHV4-39P01824 125 aa8.89□□□□□ -0.99
CCDC144CP-201ENST00000340196 IFITM1P13164 125 aa8.89□□□□□ -0.99
CCDC144CP-201ENST00000340196 UBE2D3P61077 147 aa8.89□□□□□ -0.99
CCDC144CP-201ENST00000340196 UBE2D2P62837 147 aa8.89□□□□□ -0.99
CCDC144CP-201ENST00000340196 PMVKQ15126 192 aa8.89□□□□□ -0.99
CCDC144CP-201ENST00000340196 CEMP1Q6PRD7 247 aaPredicted RBP8.89□□□□□ -0.99
CCDC144CP-201ENST00000340196 FAM223AQ8IWN6 122 aa8.89□□□□□ -0.99
CCDC144CP-201ENST00000340196 AMELXQ99217 191 aa8.89□□□□□ -0.99
CCDC144CP-201ENST00000340196 Q9UF83 564 aa8.89□□□□□ -0.99
CCDC144CP-201ENST00000340196 ZNF462Q96JM2 2506 aa8.89□□□□□ -0.99
CCDC144CP-201ENST00000340196 MYO18BQ8IUG5 2567 aa8.89□□□□□ -0.99
CCDC144CP-201ENST00000340196 NOTCH3Q9UM47 2321 aa8.88□□□□□ -0.99
CCDC144CP-201ENST00000340196 SCGB1C2P0DMR2 95 aa8.88□□□□□ -0.99
CCDC144CP-201ENST00000340196 P0DMU3 169 aa8.88□□□□□ -0.99
CCDC144CP-201ENST00000340196 FAM231AP0DMU4 169 aa8.88□□□□□ -0.99
CCDC144CP-201ENST00000340196 FAM231CP0DMU5 169 aa8.88□□□□□ -0.99
CCDC144CP-201ENST00000340196 HIST2H2BDQ6DRA6 164 aa8.88□□□□□ -0.99
CCDC144CP-201ENST00000340196 LENEPQ9Y5L5 61 aa8.88□□□□□ -0.99
CCDC144CP-201ENST00000340196 TRAV2A0A0B4J234 112 aa8.88□□□□□ -0.99
CCDC144CP-201ENST00000340196 BEX4Q9NWD9 120 aaPredicted RBP8.88□□□□□ -0.99
CCDC144CP-201ENST00000340196 A4D1N5 150 aa8.87□□□□□ -0.99
CCDC144CP-201ENST00000340196 NPC2P61916 151 aa8.87□□□□□ -0.99
CCDC144CP-201ENST00000340196 SPINK13Q1W4C9 94 aa8.87□□□□□ -0.99
CCDC144CP-201ENST00000340196 MEIG1Q5JSS6 88 aa8.87□□□□□ -0.99
CCDC144CP-201ENST00000340196 ANKRD29Q8N6D5 301 aa8.87□□□□□ -0.99
CCDC144CP-201ENST00000340196 IGHV1-69DA0A0B4J2H0 117 aa8.87□□□□□ -0.99
CCDC144CP-201ENST00000340196 A8MZ25 164 aa8.87□□□□□ -0.99
CCDC144CP-201ENST00000340196 LINC01619G3V211 115 aa8.87□□□□□ -0.99
CCDC144CP-201ENST00000340196 J3QQQ9 107 aa8.87□□□□□ -0.99
CCDC144CP-201ENST00000340196 IGHV1-69P01742 117 aa8.87□□□□□ -0.99
CCDC144CP-201ENST00000340196 PROK1P58294 105 aa8.87□□□□□ -0.99
CCDC144CP-201ENST00000340196 Q6ZSV7 163 aa8.87□□□□□ -0.99
CCDC144CP-201ENST00000340196 NIPBLQ6KC79 2804 aaeCLIP8.86□□□□□ -0.99
CCDC144CP-201ENST00000340196 A0A0J9YXV3 536 aa8.86□□□□□ -0.99
CCDC144CP-201ENST00000340196 Q8N1Y9 231 aa8.86□□□□□ -0.99
CCDC144CP-201ENST00000340196 KLLNB2CW77 178 aa8.86□□□□□ -0.99
CCDC144CP-201ENST00000340196 C2CD3Q4AC94 2353 aa8.86□□□□□ -0.99
CCDC144CP-201ENST00000340196 TMEM262E9PQX1 116 aa8.86□□□□□ -0.99
CCDC144CP-201ENST00000340196 SNCGO76070 127 aa8.86□□□□□ -0.99
CCDC144CP-201ENST00000340196 FBN2P35556 2912 aa8.85□□□□□ -0.99
CCDC144CP-201ENST00000340196 ZNF876PQ49A33 203 aa8.85□□□□□ -0.99
CCDC144CP-201ENST00000340196 C10orf126Q8N4M7 172 aa8.85□□□□□ -0.99
CCDC144CP-201ENST00000340196 SLC25A29Q8N8R3 303 aa8.85□□□□□ -0.99
CCDC144CP-201ENST00000340196 DCANP1Q8TF63 244 aa8.85□□□□□ -0.99
CCDC144CP-201ENST00000340196 VCX2Q9H322 139 aa8.85□□□□□ -0.99
CCDC144CP-201ENST00000340196 DAZ1Q9NQZ3 744 aaKnown RBP8.85□□□□□ -0.99
CCDC144CP-201ENST00000340196 NACAE9PAV3 2078 aa8.85□□□□□ -0.99
CCDC144CP-201ENST00000340196 MYO9AB2RTY4 2548 aa8.85□□□□□ -0.99
CCDC144CP-201ENST00000340196 AVPP01185 164 aa8.85□□□□□ -0.99
CCDC144CP-201ENST00000340196 LGALS3P17931 250 aaKnown RBP8.85□□□□□ -0.99
CCDC144CP-201ENST00000340196 HERVK_113P61574 105 aa8.85□□□□□ -0.99
CCDC144CP-201ENST00000340196 CCL19Q99731 98 aa8.85□□□□□ -0.99
CCDC144CP-201ENST00000340196 TRAV8-3A0A0A6YYJ7 113 aa8.84□□□□□ -0.99
CCDC144CP-201ENST00000340196 KNCNA6PVL3 124 aa8.84□□□□□ -0.99
CCDC144CP-201ENST00000340196 C9JAW5 83 aa8.84□□□□□ -0.99
CCDC144CP-201ENST00000340196 VCYO14598 125 aa8.84□□□□□ -0.99
CCDC144CP-201ENST00000340196 IGHV4OR15-8A0A075B7B6 117 aa8.84□□□□□ -0.99
CCDC144CP-201ENST00000340196 A0A087WW49 117 aa8.84□□□□□ -0.99
CCDC144CP-201ENST00000340196 A8MWV9 139 aa8.84□□□□□ -0.99
CCDC144CP-201ENST00000340196 NXPH4O95158 308 aa8.84□□□□□ -0.99
CCDC144CP-201ENST00000340196 APRG1Q8IVJ8 170 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms