RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 C20orf203Q8NBC4 194 aa7.85□□□□□ -1.15
TRAF3IP2-201ENST00000340026 KLHL30-AS1Q8NEE0 82 aa7.85□□□□□ -1.15
TRAF3IP2-201ENST00000340026 APCP25054 2843 aa7.85□□□□□ -1.15
TRAF3IP2-201ENST00000340026 F5H697 171 aa7.84□□□□□ -1.15
TRAF3IP2-201ENST00000340026 ZNF56Q15929 161 aa7.84□□□□□ -1.15
TRAF3IP2-201ENST00000340026 DYNLRB2Q8TF09 96 aa7.84□□□□□ -1.15
TRAF3IP2-201ENST00000340026 DNAJC30Q96LL9 226 aa7.84□□□□□ -1.15
TRAF3IP2-201ENST00000340026 SELENOKQ9Y6D0 94 aa7.84□□□□□ -1.15
TRAF3IP2-201ENST00000340026 IGKV3-20P01619 116 aa7.84□□□□□ -1.15
TRAF3IP2-201ENST00000340026 HERVK_113P61574 105 aa7.84□□□□□ -1.15
TRAF3IP2-201ENST00000340026 C11orf72Q8NBR9 251 aa7.84□□□□□ -1.15
TRAF3IP2-201ENST00000340026 WFDC11Q8NEX6 87 aa7.84□□□□□ -1.15
TRAF3IP2-201ENST00000340026 IL17DQ8TAD2 202 aa7.84□□□□□ -1.15
TRAF3IP2-201ENST00000340026 DOPEY2Q9Y3R5 2298 aa7.84□□□□□ -1.15
TRAF3IP2-201ENST00000340026 POLQO75417 2590 aa7.84□□□□□ -1.15
TRAF3IP2-201ENST00000340026 KNCNA6PVL3 124 aa7.83□□□□□ -1.16
TRAF3IP2-201ENST00000340026 K7EP34 96 aa7.83□□□□□ -1.16
TRAF3IP2-201ENST00000340026 FXYD2P54710 66 aa7.83□□□□□ -1.16
TRAF3IP2-201ENST00000340026 RAX2Q96IS3 184 aa7.83□□□□□ -1.16
TRAF3IP2-201ENST00000340026 INSP01308 110 aa7.83□□□□□ -1.16
TRAF3IP2-201ENST00000340026 P0DMU3 169 aa7.83□□□□□ -1.16
TRAF3IP2-201ENST00000340026 FAM231AP0DMU4 169 aa7.83□□□□□ -1.16
TRAF3IP2-201ENST00000340026 FAM231CP0DMU5 169 aa7.83□□□□□ -1.16
TRAF3IP2-201ENST00000340026 OR5A1Q8NGJ0 315 aa7.83□□□□□ -1.16
TRAF3IP2-201ENST00000340026 A0A1W2PPM0 123 aa7.82□□□□□ -1.16
TRAF3IP2-201ENST00000340026 PRADC1Q9BSG0 188 aa7.82□□□□□ -1.16
TRAF3IP2-201ENST00000340026 CENPEQ02224 2701 aa7.82□□□□□ -1.16
TRAF3IP2-201ENST00000340026 ZNF469Q96JG9 3925 aaPredicted RBP7.82□□□□□ -1.16
TRAF3IP2-201ENST00000340026 CD300EQ496F6 205 aaPredicted RBP7.82□□□□□ -1.16
TRAF3IP2-201ENST00000340026 FAM74A4Q5TZK3 123 aa7.82□□□□□ -1.16
TRAF3IP2-201ENST00000340026 TTTY13Q9BZ97 58 aa7.82□□□□□ -1.16
TRAF3IP2-201ENST00000340026 TSSC4Q9Y5U2 329 aaPredicted RBP7.82□□□□□ -1.16
TRAF3IP2-201ENST00000340026 TEX15Q9BXT5 2789 aa7.82□□□□□ -1.16
TRAF3IP2-201ENST00000340026 AGRNO00468 2067 aa7.82□□□□□ -1.16
TRAF3IP2-201ENST00000340026 MAP1AP78559 2803 aaPredicted RBP7.82□□□□□ -1.16
TRAF3IP2-201ENST00000340026 NEGR1Q7Z3B1 354 aa7.82□□□□□ -1.16
TRAF3IP2-201ENST00000340026 ESM1Q9NQ30 184 aa7.82□□□□□ -1.16
TRAF3IP2-201ENST00000340026 SPANXB1Q9NS25 103 aaPredicted RBP7.82□□□□□ -1.16
TRAF3IP2-201ENST00000340026 ANK3Q12955 4377 aaKnown RBP7.81□□□□□ -1.16
TRAF3IP2-201ENST00000340026 GAGE10A6NGK3 116 aa7.81□□□□□ -1.16
TRAF3IP2-201ENST00000340026 RS1O15537 224 aa7.81□□□□□ -1.16
TRAF3IP2-201ENST00000340026 GCSHP23434 173 aa7.81□□□□□ -1.16
TRAF3IP2-201ENST00000340026 NDUFA7O95182 113 aa7.81□□□□□ -1.16
TRAF3IP2-201ENST00000340026 IGHV3-53P01767 116 aa7.81□□□□□ -1.16
TRAF3IP2-201ENST00000340026 ODF3L2Q3SX64 289 aa7.81□□□□□ -1.16
TRAF3IP2-201ENST00000340026 DUX3Q96PT4 197 aa7.81□□□□□ -1.16
TRAF3IP2-201ENST00000340026 CCL24O00175 119 aa7.8□□□□□ -1.16
TRAF3IP2-201ENST00000340026 RPL39P62891 51 aaKnown RBP7.8□□□□□ -1.16
TRAF3IP2-201ENST00000340026 CFAP126Q5VTH2 177 aa7.8□□□□□ -1.16
TRAF3IP2-201ENST00000340026 AMELXQ99217 191 aa7.8□□□□□ -1.16
TRAF3IP2-201ENST00000340026 ABCA12Q86UK0 2595 aa7.8□□□□□ -1.16
TRAF3IP2-201ENST00000340026 ITPR3Q14573 2671 aa7.8□□□□□ -1.16
TRAF3IP2-201ENST00000340026 PLA2G2AP14555 144 aa7.8□□□□□ -1.16
TRAF3IP2-201ENST00000340026 TCTAP57738 103 aa7.8□□□□□ -1.16
TRAF3IP2-201ENST00000340026 H3BUT2 72 aa7.79□□□□□ -1.16
TRAF3IP2-201ENST00000340026 FABP2P12104 132 aa7.79□□□□□ -1.16
TRAF3IP2-201ENST00000340026 NBPF19A0A087WUL8 3843 aa7.79□□□□□ -1.16
TRAF3IP2-201ENST00000340026 NACAE9PAV3 2078 aa7.79□□□□□ -1.16
TRAF3IP2-201ENST00000340026 GAGE12BA1L429 117 aa7.79□□□□□ -1.16
TRAF3IP2-201ENST00000340026 ZNRF2Q8NHG8 242 aa7.79□□□□□ -1.16
TRAF3IP2-201ENST00000340026 SPANXA1Q9NS26 97 aa7.79□□□□□ -1.16
TRAF3IP2-201ENST00000340026 IGLV4-3A0A075B6K6 122 aa7.78□□□□□ -1.16
TRAF3IP2-201ENST00000340026 J3QKU1 62 aa7.78□□□□□ -1.16
TRAF3IP2-201ENST00000340026 SAMD5Q5TGI4 173 aa7.78□□□□□ -1.16
TRAF3IP2-201ENST00000340026 TMEM223A0PJW6 202 aa7.78□□□□□ -1.16
TRAF3IP2-201ENST00000340026 ZNF815PA8K554 130 aa7.78□□□□□ -1.16
TRAF3IP2-201ENST00000340026 CIDEAO60543 219 aa7.78□□□□□ -1.16
TRAF3IP2-201ENST00000340026 C12orf74Q32Q52 190 aa7.78□□□□□ -1.16
TRAF3IP2-201ENST00000340026 LINC01006Q8NI28 216 aa7.78□□□□□ -1.16
TRAF3IP2-201ENST00000340026 HIST1H4GQ99525 98 aa7.78□□□□□ -1.16
TRAF3IP2-201ENST00000340026 EPG5Q9HCE0 2579 aa7.78□□□□□ -1.16
TRAF3IP2-201ENST00000340026 HILS1P60008 231 aa7.77□□□□□ -1.16
TRAF3IP2-201ENST00000340026 MRPS36P82909 103 aaKnown RBP7.77□□□□□ -1.16
TRAF3IP2-201ENST00000340026 KHDC1LQ5JSQ8 128 aa7.77□□□□□ -1.16
TRAF3IP2-201ENST00000340026 TIMM21Q9BVV7 248 aa7.77□□□□□ -1.16
TRAF3IP2-201ENST00000340026 LEPROTO15243 131 aa7.77□□□□□ -1.17
TRAF3IP2-201ENST00000340026 CD28P10747 220 aa7.77□□□□□ -1.17
TRAF3IP2-201ENST00000340026 UBE2D1P51668 147 aa7.77□□□□□ -1.17
TRAF3IP2-201ENST00000340026 FAM104AQ969W3 186 aa7.77□□□□□ -1.17
TRAF3IP2-201ENST00000340026 LINC01587Q99440 93 aa7.77□□□□□ -1.17
TRAF3IP2-201ENST00000340026 TNFRSF18Q9Y5U5 241 aa7.77□□□□□ -1.17
TRAF3IP2-201ENST00000340026 A0A0J9YY99 117 aa7.76□□□□□ -1.17
TRAF3IP2-201ENST00000340026 IGLL5B9A064 214 aa7.76□□□□□ -1.17
TRAF3IP2-201ENST00000340026 CBY1Q9Y3M2 126 aa7.76□□□□□ -1.17
TRAF3IP2-201ENST00000340026 PDZD2O15018 2839 aa7.76□□□□□ -1.17
TRAF3IP2-201ENST00000340026 TRBV10-1A0A0K0K1A3 114 aa7.76□□□□□ -1.17
TRAF3IP2-201ENST00000340026 RBX1P62877 108 aa7.76□□□□□ -1.17
TRAF3IP2-201ENST00000340026 STHQ8IWL8 128 aa7.76□□□□□ -1.17
TRAF3IP2-201ENST00000340026 C1orf158Q8N1D5 194 aa7.76□□□□□ -1.17
TRAF3IP2-201ENST00000340026 SLC25A29Q8N8R3 303 aa7.76□□□□□ -1.17
TRAF3IP2-201ENST00000340026 RNASE8Q8TDE3 154 aaKnown RBP7.76□□□□□ -1.17
TRAF3IP2-201ENST00000340026 NHP2Q9NX24 153 aaKnown RBP7.76□□□□□ -1.17
TRAF3IP2-201ENST00000340026 SPCS1Q9Y6A9 102 aa7.76□□□□□ -1.17
TRAF3IP2-201ENST00000340026 IGLV1-51P01701 117 aa7.76□□□□□ -1.17
TRAF3IP2-201ENST00000340026 CHCHD7Q9BUK0 85 aa7.76□□□□□ -1.17
TRAF3IP2-201ENST00000340026 VCX2Q9H322 139 aa7.76□□□□□ -1.17
TRAF3IP2-201ENST00000340026 KMT2BQ9UMN6 2715 aaPredicted RBP7.75□□□□□ -1.17
TRAF3IP2-201ENST00000340026 MYO9AB2RTY4 2548 aa7.75□□□□□ -1.17
TRAF3IP2-201ENST00000340026 ZNF22P17026 224 aaPredicted RBP7.75□□□□□ -1.17
TRAF3IP2-201ENST00000340026 FAM19A3Q7Z5A8 133 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms