RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 IL17DQ8TAD2 202 aa10.06□□□□□ -0.8
USP47-202ENST00000339865 APRG1Q8IVJ8 170 aa10.06□□□□□ -0.8
USP47-202ENST00000339865 ATP6V0E2Q8NHE4 81 aa10.06□□□□□ -0.8
USP47-202ENST00000339865 KIAA1549LQ6ZVL6 1849 aa10.06□□□□□ -0.8
USP47-202ENST00000339865 IGHV1-69DA0A0B4J2H0 117 aa10.06□□□□□ -0.8
USP47-202ENST00000339865 Q6ZS49 121 aa10.06□□□□□ -0.8
USP47-202ENST00000339865 K7EQD1 137 aa10.05□□□□□ -0.8
USP47-202ENST00000339865 CCL24O00175 119 aa10.05□□□□□ -0.8
USP47-202ENST00000339865 K7EM74 188 aa10.05□□□□□ -0.8
USP47-202ENST00000339865 E7EQL1 145 aa10.05□□□□□ -0.8
USP47-202ENST00000339865 COL24A1Q17RW2 1714 aa10.05□□□□□ -0.8
USP47-202ENST00000339865 IGKV2-24A0A0C4DH68 120 aa10.05□□□□□ -0.8
USP47-202ENST00000339865 TCL1BO95988 128 aa10.05□□□□□ -0.8
USP47-202ENST00000339865 IGHV1-69P01742 117 aa10.05□□□□□ -0.8
USP47-202ENST00000339865 ZNF833PQ6ZTB9 187 aa10.05□□□□□ -0.8
USP47-202ENST00000339865 ZFAND3Q9H8U3 227 aa10.05□□□□□ -0.8
USP47-202ENST00000339865 TRBV7-3A0A075B6L6 115 aa10.05□□□□□ -0.8
USP47-202ENST00000339865 GATA3P23771 443 aa10.05□□□□□ -0.8
USP47-202ENST00000339865 X6R8D5 127 aa10.04□□□□□ -0.8
USP47-202ENST00000339865 IGLV3-12A0A075B6K2 115 aa10.04□□□□□ -0.8
USP47-202ENST00000339865 B9D2Q9BPU9 175 aa10.04□□□□□ -0.8
USP47-202ENST00000339865 WT1-ASQ06250 92 aa10.04□□□□□ -0.8
USP47-202ENST00000339865 HHLA3Q9XRX5 114 aa10.04□□□□□ -0.8
USP47-202ENST00000339865 CSRP1P21291 193 aaKnown RBP10.04□□□□□ -0.8
USP47-202ENST00000339865 DEFB136Q30KP8 78 aa10.03□□□□□ -0.8
USP47-202ENST00000339865 CACNA1AO00555 2505 aa10.03□□□□□ -0.8
USP47-202ENST00000339865 C16orf54Q6UWD8 224 aa10.03□□□□□ -0.8
USP47-202ENST00000339865 TTTY13Q9BZ97 58 aa10.03□□□□□ -0.8
USP47-202ENST00000339865 IGLV2-18A0A075B6J9 118 aa10.03□□□□□ -0.8
USP47-202ENST00000339865 CENPVL3A0A0U1RRI6 287 aa10.03□□□□□ -0.8
USP47-202ENST00000339865 IGKV1-6A0A0C4DH72 117 aa10.02□□□□□ -0.8
USP47-202ENST00000339865 LRP4O75096 1905 aa10.02□□□□□ -0.8
USP47-202ENST00000339865 ZNF883P0CG24 379 aa10.02□□□□□ -0.81
USP47-202ENST00000339865 COX7BP24311 80 aa10.02□□□□□ -0.81
USP47-202ENST00000339865 NDUFC1O43677 76 aa10.02□□□□□ -0.81
USP47-202ENST00000339865 MYO9AB2RTY4 2548 aa10.02□□□□□ -0.81
USP47-202ENST00000339865 ATP5EP56381 51 aaPredicted RBP10.02□□□□□ -0.81
USP47-202ENST00000339865 SPAG11BQ08648 103 aa10.02□□□□□ -0.81
USP47-202ENST00000339865 E9PLD3 99 aa10.01□□□□□ -0.81
USP47-202ENST00000339865 PTPRSQ13332 1948 aa10.01□□□□□ -0.81
USP47-202ENST00000339865 GP9P14770 177 aa10.01□□□□□ -0.81
USP47-202ENST00000339865 HRCT1Q6UXD1 115 aa10.01□□□□□ -0.81
USP47-202ENST00000339865 HIVEP2P31629 2446 aa10.01□□□□□ -0.81
USP47-202ENST00000339865 IGHV4-61A0A0C4DH41 118 aa10□□□□□ -0.81
USP47-202ENST00000339865 Q8N1Y9 231 aa10□□□□□ -0.81
USP47-202ENST00000339865 HIGD1BQ9P298 99 aa10□□□□□ -0.81
USP47-202ENST00000339865 C16orf74Q96GX8 76 aa10□□□□□ -0.81
USP47-202ENST00000339865 NUPR1O60356 82 aa10□□□□□ -0.81
USP47-202ENST00000339865 TMEM263Q8WUH6 116 aaKnown RBP10□□□□□ -0.81
USP47-202ENST00000339865 HIGD2AQ9BW72 106 aa10□□□□□ -0.81
USP47-202ENST00000339865 SPART-AS1P0CW21 52 aa10□□□□□ -0.81
USP47-202ENST00000339865 KLK12Q9UKR0 248 aa10□□□□□ -0.81
USP47-202ENST00000339865 COA6Q5JTJ3 125 aaKnown RBP10□□□□□ -0.81
USP47-202ENST00000339865 IGF2-ASQ6U949 168 aa9.99□□□□□ -0.81
USP47-202ENST00000339865 IGHV4-38-2P0DP08 117 aa9.99□□□□□ -0.81
USP47-202ENST00000339865 C17orf58Q2M2W7 97 aa9.99□□□□□ -0.81
USP47-202ENST00000339865 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.99□□□□□ -0.81
USP47-202ENST00000339865 AGPAT4-IT1Q9H0P7 198 aa9.99□□□□□ -0.81
USP47-202ENST00000339865 NDUFA11Q86Y39 141 aa9.99□□□□□ -0.81
USP47-202ENST00000339865 C9orf85Q96MD7 179 aa9.99□□□□□ -0.81
USP47-202ENST00000339865 SIRPDQ9H106 197 aa9.99□□□□□ -0.81
USP47-202ENST00000339865 CSRP3P50461 194 aa9.99□□□□□ -0.81
USP47-202ENST00000339865 KIR2DL5BQ8NHK3 375 aa9.98□□□□□ -0.81
USP47-202ENST00000339865 NDUFA7O95182 113 aa9.98□□□□□ -0.81
USP47-202ENST00000339865 WDR87Q6ZQQ6 2873 aa9.98□□□□□ -0.81
USP47-202ENST00000339865 C3orf84H3BNL1 204 aa9.98□□□□□ -0.81
USP47-202ENST00000339865 TOMM6Q96B49 74 aa9.98□□□□□ -0.81
USP47-202ENST00000339865 RAI1Q7Z5J4 1906 aaPredicted RBP9.98□□□□□ -0.81
USP47-202ENST00000339865 C7orf33Q8WU49 177 aa9.98□□□□□ -0.81
USP47-202ENST00000339865 MSRB1Q9NZV6 116 aa9.98□□□□□ -0.81
USP47-202ENST00000339865 SERP2Q8N6R1 65 aa9.97□□□□□ -0.81
USP47-202ENST00000339865 Q8N9W7 124 aa9.97□□□□□ -0.81
USP47-202ENST00000339865 ACACBO00763 2458 aa9.97□□□□□ -0.81
USP47-202ENST00000339865 A0A087WZ39 114 aa9.97□□□□□ -0.81
USP47-202ENST00000339865 SLPIP03973 132 aa9.96□□□□□ -0.81
USP47-202ENST00000339865 C1orf158Q8N1D5 194 aa9.96□□□□□ -0.81
USP47-202ENST00000339865 SMAD5-AS1Q9Y6J3 95 aa9.96□□□□□ -0.81
USP47-202ENST00000339865 COL11A2P13942 1736 aaPredicted RBP9.96□□□□□ -0.81
USP47-202ENST00000339865 TRBV27A0A0K0K1C4 114 aa9.96□□□□□ -0.81
USP47-202ENST00000339865 C11orf86A6NJI1 115 aa9.96□□□□□ -0.81
USP47-202ENST00000339865 IGHV1-58A0A0C4DH39 117 aa9.96□□□□□ -0.82
USP47-202ENST00000339865 BLCAPP62952 87 aa9.96□□□□□ -0.82
USP47-202ENST00000339865 LENEPQ9Y5L5 61 aa9.96□□□□□ -0.82
USP47-202ENST00000339865 PRYO14603 147 aa9.95□□□□□ -0.82
USP47-202ENST00000339865 DIAPH2-AS1Q14236 149 aa9.95□□□□□ -0.82
USP47-202ENST00000339865 SPATA12Q7Z6I5 190 aa9.95□□□□□ -0.82
USP47-202ENST00000339865 Q8N9L7 120 aa9.95□□□□□ -0.82
USP47-202ENST00000339865 DEFB112Q30KQ8 113 aa9.95□□□□□ -0.82
USP47-202ENST00000339865 SLURP1P55000 103 aa9.95□□□□□ -0.82
USP47-202ENST00000339865 MIAQ16674 131 aa9.95□□□□□ -0.82
USP47-202ENST00000339865 FAM19A3Q7Z5A8 133 aa9.95□□□□□ -0.82
USP47-202ENST00000339865 NRGNQ92686 78 aa9.94□□□□□ -0.82
USP47-202ENST00000339865 IGKV1D-37A0A075B6S9 117 aa9.94□□□□□ -0.82
USP47-202ENST00000339865 SPINK6Q6UWN8 80 aa9.94□□□□□ -0.82
USP47-202ENST00000339865 LOXP28300 417 aaPredicted RBP9.94□□□□□ -0.82
USP47-202ENST00000339865 DEFB113Q30KQ7 82 aa9.94□□□□□ -0.82
USP47-202ENST00000339865 Q6Q795 121 aa9.93□□□□□ -0.82
USP47-202ENST00000339865 NFE4Q86UQ8 179 aa9.93□□□□□ -0.82
USP47-202ENST00000339865 WT1P19544 449 aaPredicted RBP9.93□□□□□ -0.82
USP47-202ENST00000339865 LINC00694P0DN24 101 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms