RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 TSHBP01222 138 aa12.05□□□□□ -0.48
LITAF-201ENST00000339430 TCTEX1D4Q5JR98 221 aa12.05□□□□□ -0.48
LITAF-201ENST00000339430 UBE2E2Q96LR5 201 aa12.05□□□□□ -0.48
LITAF-201ENST00000339430 ODF3Q96PU9 254 aa12.05□□□□□ -0.48
LITAF-201ENST00000339430 CRLF1O75462 422 aa12.05□□□□□ -0.48
LITAF-201ENST00000339430 HTN1P15515 57 aa12.05□□□□□ -0.48
LITAF-201ENST00000339430 DUX3Q96PT4 197 aa12.05□□□□□ -0.48
LITAF-201ENST00000339430 HIST1H4GQ99525 98 aa12.05□□□□□ -0.48
LITAF-201ENST00000339430 SPCS1Q9Y6A9 102 aa12.05□□□□□ -0.48
LITAF-201ENST00000339430 LGALS9O00182 355 aa12.04□□□□□ -0.48
LITAF-201ENST00000339430 CRYGDP07320 174 aa12.04□□□□□ -0.48
LITAF-201ENST00000339430 OCIAD2Q56VL3 154 aa12.04□□□□□ -0.48
LITAF-201ENST00000339430 SAMD5Q5TGI4 173 aa12.04□□□□□ -0.48
LITAF-201ENST00000339430 RNF152Q8N8N0 203 aa12.04□□□□□ -0.48
LITAF-201ENST00000339430 TM2D2Q9BX73 214 aa12.04□□□□□ -0.48
LITAF-201ENST00000339430 KNCNA6PVL3 124 aa12.04□□□□□ -0.48
LITAF-201ENST00000339430 VCYO14598 125 aa12.04□□□□□ -0.48
LITAF-201ENST00000339430 KIR2DL4Q99706 377 aa12.04□□□□□ -0.48
LITAF-201ENST00000339430 MYMXA0A1B0GTQ4 84 aa12.03□□□□□ -0.48
LITAF-201ENST00000339430 SYT8Q8NBV8 401 aa12.03□□□□□ -0.48
LITAF-201ENST00000339430 LINC01006Q8NI28 216 aa12.03□□□□□ -0.48
LITAF-201ENST00000339430 PRADC1Q9BSG0 188 aa12.03□□□□□ -0.48
LITAF-201ENST00000339430 MORN3Q6PF18 240 aaPredicted RBP12.03□□□□□ -0.48
LITAF-201ENST00000339430 FABP2P12104 132 aa12.02□□□□□ -0.49
LITAF-201ENST00000339430 CD300EQ496F6 205 aaPredicted RBP12.02□□□□□ -0.49
LITAF-201ENST00000339430 PHLDA1Q8WV24 401 aaPredicted RBP12.02□□□□□ -0.49
LITAF-201ENST00000339430 IGIPA6NJ69 53 aa12.01□□□□□ -0.49
LITAF-201ENST00000339430 RBMY1A1P0DJD3 496 aaKnown RBP12.01□□□□□ -0.49
LITAF-201ENST00000339430 RBMY1CP0DJD4 496 aa12.01□□□□□ -0.49
LITAF-201ENST00000339430 RBMY1FQ15415 496 aaKnown RBP12.01□□□□□ -0.49
LITAF-201ENST00000339430 ZNF876PQ49A33 203 aa12.01□□□□□ -0.49
LITAF-201ENST00000339430 KHDC1LQ5JSQ8 128 aa12.01□□□□□ -0.49
LITAF-201ENST00000339430 AMTNQ6UX39 209 aa12.01□□□□□ -0.49
LITAF-201ENST00000339430 C16orf95Q9H693 158 aa12.01□□□□□ -0.49
LITAF-201ENST00000339430 C11orf86A6NJI1 115 aa12.01□□□□□ -0.49
LITAF-201ENST00000339430 PRM2P04554 102 aa12.01□□□□□ -0.49
LITAF-201ENST00000339430 RPL32P62910 135 aaKnown RBP12.01□□□□□ -0.49
LITAF-201ENST00000339430 FOXI2Q6ZQN5 318 aa12.01□□□□□ -0.49
LITAF-201ENST00000339430 NIPBLQ6KC79 2804 aaeCLIP12.01□□□□□ -0.49
LITAF-201ENST00000339430 E9PLD3 99 aa12□□□□□ -0.49
LITAF-201ENST00000339430 M0QY20 66 aa12□□□□□ -0.49
LITAF-201ENST00000339430 DEFB131AP59861 70 aa12□□□□□ -0.49
LITAF-201ENST00000339430 C21orf62-AS1Q17RA5 79 aa12□□□□□ -0.49
LITAF-201ENST00000339430 IGLV4-69A0A075B6H9 119 aa12□□□□□ -0.49
LITAF-201ENST00000339430 C11orf44Q8N8P7 122 aa12□□□□□ -0.49
LITAF-201ENST00000339430 TRBV27A0A0K0K1C4 114 aa11.99□□□□□ -0.49
LITAF-201ENST00000339430 SAP30O75446 220 aa11.99□□□□□ -0.49
LITAF-201ENST00000339430 KLHL30-AS1Q8NEE0 82 aa11.99□□□□□ -0.49
LITAF-201ENST00000339430 TRBV7-3A0A075B6L6 115 aa11.99□□□□□ -0.49
LITAF-201ENST00000339430 IGHV3-73A0A0B4J1V6 119 aa11.99□□□□□ -0.49
LITAF-201ENST00000339430 ZNF815PA8K554 130 aa11.99□□□□□ -0.49
LITAF-201ENST00000339430 PMVKQ15126 192 aa11.99□□□□□ -0.49
LITAF-201ENST00000339430 TAL2Q16559 108 aa11.98□□□□□ -0.49
LITAF-201ENST00000339430 C12orf74Q32Q52 190 aa11.98□□□□□ -0.49
LITAF-201ENST00000339430 PLEKHB2Q96CS7 222 aa11.98□□□□□ -0.49
LITAF-201ENST00000339430 OPRPNQ99935 248 aaPredicted RBP11.98□□□□□ -0.49
LITAF-201ENST00000339430 TEP1Q99973 2627 aaKnown RBP11.98□□□□□ -0.49
LITAF-201ENST00000339430 TRBV6-5A0A0K0K1A5 114 aa11.98□□□□□ -0.49
LITAF-201ENST00000339430 C2CD3Q4AC94 2353 aa11.97□□□□□ -0.49
LITAF-201ENST00000339430 NDUFA7O95182 113 aa11.97□□□□□ -0.49
LITAF-201ENST00000339430 PCP4P48539 62 aa11.97□□□□□ -0.49
LITAF-201ENST00000339430 CD28P10747 220 aa11.97□□□□□ -0.49
LITAF-201ENST00000339430 RIPPLY3P57055 190 aa11.97□□□□□ -0.49
LITAF-201ENST00000339430 SCGB1D4Q6XE38 83 aa11.97□□□□□ -0.49
LITAF-201ENST00000339430 VPS25Q9BRG1 176 aa11.97□□□□□ -0.49
LITAF-201ENST00000339430 TRGV11A0A075B6L2 103 aa11.96□□□□□ -0.49
LITAF-201ENST00000339430 TRPT1Q86TN4 253 aaKnown RBP11.96□□□□□ -0.49
LITAF-201ENST00000339430 TMEM61Q8N0U2 210 aa11.96□□□□□ -0.49
LITAF-201ENST00000339430 OR5A1Q8NGJ0 315 aa11.96□□□□□ -0.49
LITAF-201ENST00000339430 TMEM141Q96I45 108 aa11.96□□□□□ -0.49
LITAF-201ENST00000339430 JMJD1CQ15652 2540 aa11.96□□□□□ -0.49
LITAF-201ENST00000339430 RBMY1BA6NDE4 496 aaKnown RBP11.96□□□□□ -0.5
LITAF-201ENST00000339430 RBMY1EA6NEQ0 496 aaKnown RBP11.96□□□□□ -0.5
LITAF-201ENST00000339430 IGLL5B9A064 214 aa11.96□□□□□ -0.5
LITAF-201ENST00000339430 LINC01619G3V211 115 aa11.96□□□□□ -0.5
LITAF-201ENST00000339430 RBMY1DP0C7P1 496 aaKnown RBP11.96□□□□□ -0.5
LITAF-201ENST00000339430 TMEM170BQ5T4T1 132 aa11.96□□□□□ -0.5
LITAF-201ENST00000339430 TIMM17AQ99595 171 aa11.96□□□□□ -0.5
LITAF-201ENST00000339430 P0DMU3 169 aa11.95□□□□□ -0.5
LITAF-201ENST00000339430 FAM231AP0DMU4 169 aa11.95□□□□□ -0.5
LITAF-201ENST00000339430 FAM231CP0DMU5 169 aa11.95□□□□□ -0.5
LITAF-201ENST00000339430 PROK1P58294 105 aa11.95□□□□□ -0.5
LITAF-201ENST00000339430 ZNRF2Q8NHG8 242 aa11.95□□□□□ -0.5
LITAF-201ENST00000339430 C4orf3Q8WVX3 66 aa11.95□□□□□ -0.5
LITAF-201ENST00000339430 MAST4O15021 2626 aa11.95□□□□□ -0.5
LITAF-201ENST00000339430 A0A1W2PRX2 142 aa11.94□□□□□ -0.5
LITAF-201ENST00000339430 K7ERU9 68 aa11.94□□□□□ -0.5
LITAF-201ENST00000339430 DLX4Q92988 240 aaPredicted RBP11.94□□□□□ -0.5
LITAF-201ENST00000339430 ZNF479Q96JC4 524 aa11.94□□□□□ -0.5
LITAF-201ENST00000339430 H3BMM0 161 aa11.93□□□□□ -0.5
LITAF-201ENST00000339430 CITED2Q99967 270 aaPredicted RBP11.93□□□□□ -0.5
LITAF-201ENST00000339430 LINC01549A6NIU2 74 aa11.93□□□□□ -0.5
LITAF-201ENST00000339430 WNK1Q9H4A3 2382 aa11.93□□□□□ -0.5
LITAF-201ENST00000339430 NACAE9PAV3 2078 aa11.92□□□□□ -0.5
LITAF-201ENST00000339430 TSPEAR-AS2P59090 65 aa11.92□□□□□ -0.5
LITAF-201ENST00000339430 HERVK_113P61574 105 aa11.92□□□□□ -0.5
LITAF-201ENST00000339430 NSUN5P1Q3KNT7 163 aa11.92□□□□□ -0.5
LITAF-201ENST00000339430 PAPPA-AS1Q5QFB9 102 aa11.92□□□□□ -0.5
LITAF-201ENST00000339430 I3L3M4 83 aa11.92□□□□□ -0.5
LITAF-201ENST00000339430 SRSF9Q13242 221 aaKnown RBP eCLIP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms