RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 NPYP01303 97 aa10.25□□□□□ -0.77
NIPAL3-202ENST00000339255 PRADC1Q9BSG0 188 aa10.25□□□□□ -0.77
NIPAL3-202ENST00000339255 MAP1LC3AQ9H492 121 aa10.25□□□□□ -0.77
NIPAL3-202ENST00000339255 HHLA3Q9XRX5 114 aa10.25□□□□□ -0.77
NIPAL3-202ENST00000339255 SUMO2P61956 95 aaKnown RBP10.25□□□□□ -0.77
NIPAL3-202ENST00000339255 C18orf32Q8TCD1 76 aa10.25□□□□□ -0.77
NIPAL3-202ENST00000339255 ST20Q9HBF5 79 aa10.25□□□□□ -0.77
NIPAL3-202ENST00000339255 GAS8-AS1O95177 125 aa10.24□□□□□ -0.77
NIPAL3-202ENST00000339255 HOXA5P20719 270 aa10.24□□□□□ -0.77
NIPAL3-202ENST00000339255 RPL32P62910 135 aaKnown RBP10.24□□□□□ -0.77
NIPAL3-202ENST00000339255 Q0VG73 95 aa10.24□□□□□ -0.77
NIPAL3-202ENST00000339255 Q6ZTC4 211 aa10.24□□□□□ -0.77
NIPAL3-202ENST00000339255 RPL39LQ96EH5 51 aaKnown RBP10.24□□□□□ -0.77
NIPAL3-202ENST00000339255 PRSS47A8MTI9 375 aa10.23□□□□□ -0.77
NIPAL3-202ENST00000339255 F5H768 121 aa10.23□□□□□ -0.77
NIPAL3-202ENST00000339255 PMCHP20382 165 aa10.23□□□□□ -0.77
NIPAL3-202ENST00000339255 CRYBA4P53673 196 aa10.23□□□□□ -0.77
NIPAL3-202ENST00000339255 NANOS2P60321 138 aaKnown RBP10.23□□□□□ -0.77
NIPAL3-202ENST00000339255 RPL36AP83881 106 aaKnown RBP10.23□□□□□ -0.77
NIPAL3-202ENST00000339255 RPL36ALQ969Q0 106 aaKnown RBP10.23□□□□□ -0.77
NIPAL3-202ENST00000339255 NXT2Q9NPJ8 142 aaKnown RBP10.23□□□□□ -0.77
NIPAL3-202ENST00000339255 TNFRSF18Q9Y5U5 241 aa10.23□□□□□ -0.77
NIPAL3-202ENST00000339255 PRKDCP78527 4128 aaKnown RBP10.23□□□□□ -0.77
NIPAL3-202ENST00000339255 TRBV7-3A0A075B6L6 115 aa10.22□□□□□ -0.77
NIPAL3-202ENST00000339255 PAX4O43316 350 aa10.22□□□□□ -0.77
NIPAL3-202ENST00000339255 HTN3P15516 51 aa10.22□□□□□ -0.77
NIPAL3-202ENST00000339255 SDHAF1A6NFY7 115 aa10.22□□□□□ -0.77
NIPAL3-202ENST00000339255 H3BNG1 76 aa10.22□□□□□ -0.77
NIPAL3-202ENST00000339255 BAGE3Q86Y29 109 aa10.22□□□□□ -0.77
NIPAL3-202ENST00000339255 NEXN-AS1Q8NBZ9 246 aa10.22□□□□□ -0.77
NIPAL3-202ENST00000339255 SMIM2Q9BVW6 85 aa10.22□□□□□ -0.77
NIPAL3-202ENST00000339255 TRAV10A0A0B4J240 114 aa10.21□□□□□ -0.78
NIPAL3-202ENST00000339255 K7EMI3 77 aa10.21□□□□□ -0.78
NIPAL3-202ENST00000339255 P0DMU3 169 aa10.21□□□□□ -0.78
NIPAL3-202ENST00000339255 FAM231AP0DMU4 169 aa10.21□□□□□ -0.78
NIPAL3-202ENST00000339255 FAM231CP0DMU5 169 aa10.21□□□□□ -0.78
NIPAL3-202ENST00000339255 PRSS3P2Q8NHM4 247 aa10.21□□□□□ -0.78
NIPAL3-202ENST00000339255 TMEM70Q9BUB7 260 aa10.21□□□□□ -0.78
NIPAL3-202ENST00000339255 DEFB131BA0A096LNP1 70 aa10.2□□□□□ -0.78
NIPAL3-202ENST00000339255 TRBV27A0A0K0K1C4 114 aa10.2□□□□□ -0.78
NIPAL3-202ENST00000339255 VCYO14598 125 aa10.2□□□□□ -0.78
NIPAL3-202ENST00000339255 TCAPO15273 167 aa10.2□□□□□ -0.78
NIPAL3-202ENST00000339255 POLR2KP53803 58 aaKnown RBP10.2□□□□□ -0.78
NIPAL3-202ENST00000339255 COA6Q5JTJ3 125 aaKnown RBP10.2□□□□□ -0.78
NIPAL3-202ENST00000339255 TRAV26-1A0A087WT03 109 aa10.19□□□□□ -0.78
NIPAL3-202ENST00000339255 S100A6P06703 90 aa10.19□□□□□ -0.78
NIPAL3-202ENST00000339255 Q8N8P6 123 aa10.19□□□□□ -0.78
NIPAL3-202ENST00000339255 LOC389332A0A1B0GUA5 103 aa10.18□□□□□ -0.78
NIPAL3-202ENST00000339255 GYPEP15421 78 aa10.18□□□□□ -0.78
NIPAL3-202ENST00000339255 IQCJQ1A5X6 159 aa10.18□□□□□ -0.78
NIPAL3-202ENST00000339255 FA2HQ7L5A8 372 aa10.18□□□□□ -0.78
NIPAL3-202ENST00000339255 SH2D6Q7Z4S9 175 aa10.18□□□□□ -0.78
NIPAL3-202ENST00000339255 DAZ4Q86SG3 579 aaKnown RBP10.18□□□□□ -0.78
NIPAL3-202ENST00000339255 ZNRF2Q8NHG8 242 aa10.18□□□□□ -0.78
NIPAL3-202ENST00000339255 CHCHD1Q96BP2 118 aaKnown RBP10.18□□□□□ -0.78
NIPAL3-202ENST00000339255 VSIG2Q96IQ7 327 aa10.18□□□□□ -0.78
NIPAL3-202ENST00000339255 KIR2DL4Q99706 377 aa10.18□□□□□ -0.78
NIPAL3-202ENST00000339255 DAZ3Q9NR90 486 aaKnown RBP10.18□□□□□ -0.78
NIPAL3-202ENST00000339255 AP5S1Q9NUS5 200 aa10.18□□□□□ -0.78
NIPAL3-202ENST00000339255 TMA7Q9Y2S6 64 aaKnown RBP10.18□□□□□ -0.78
NIPAL3-202ENST00000339255 I3L3M4 83 aa10.18□□□□□ -0.78
NIPAL3-202ENST00000339255 LINC00614P0C842 121 aa10.18□□□□□ -0.78
NIPAL3-202ENST00000339255 LINC00694P0DN24 101 aa10.18□□□□□ -0.78
NIPAL3-202ENST00000339255 IFI27P40305 119 aaPredicted RBP10.18□□□□□ -0.78
NIPAL3-202ENST00000339255 UBE2D3P61077 147 aa10.18□□□□□ -0.78
NIPAL3-202ENST00000339255 UBE2D2P62837 147 aa10.18□□□□□ -0.78
NIPAL3-202ENST00000339255 Q9UF83 564 aa10.18□□□□□ -0.78
NIPAL3-202ENST00000339255 IGLV2-18A0A075B6J9 118 aa10.17□□□□□ -0.78
NIPAL3-202ENST00000339255 GAGE12JA6NER3 117 aa10.17□□□□□ -0.78
NIPAL3-202ENST00000339255 GAGE1Q13065 139 aa10.17□□□□□ -0.78
NIPAL3-202ENST00000339255 GAGE4Q13068 117 aa10.17□□□□□ -0.78
NIPAL3-202ENST00000339255 GAGE5Q13069 117 aa10.17□□□□□ -0.78
NIPAL3-202ENST00000339255 MRPL23Q16540 153 aaKnown RBP10.17□□□□□ -0.78
NIPAL3-202ENST00000339255 GAGE13Q4V321 117 aa10.17□□□□□ -0.78
NIPAL3-202ENST00000339255 RNASEKQ6P5S7 137 aaKnown RBP10.17□□□□□ -0.78
NIPAL3-202ENST00000339255 ICOSQ9Y6W8 199 aa10.17□□□□□ -0.78
NIPAL3-202ENST00000339255 HUWE1Q7Z6Z7 4374 aaKnown RBP10.17□□□□□ -0.78
NIPAL3-202ENST00000339255 A0A0J9YY99 117 aa10.16□□□□□ -0.78
NIPAL3-202ENST00000339255 LINC01546A6NGU7 62 aa10.16□□□□□ -0.78
NIPAL3-202ENST00000339255 SERF1AO75920 110 aa10.16□□□□□ -0.78
NIPAL3-202ENST00000339255 NDUFA6P56556 154 aa10.16□□□□□ -0.78
NIPAL3-202ENST00000339255 NIT1Q86X76 327 aa10.16□□□□□ -0.78
NIPAL3-202ENST00000339255 LOC100131303A0A0U1RQF7 123 aa10.15□□□□□ -0.78
NIPAL3-202ENST00000339255 DNAH9Q9NYC9 4486 aa10.15□□□□□ -0.78
NIPAL3-202ENST00000339255 HSBP1O75506 76 aa10.15□□□□□ -0.79
NIPAL3-202ENST00000339255 ESDP10768 282 aa10.15□□□□□ -0.79
NIPAL3-202ENST00000339255 FCER1GP30273 86 aa10.15□□□□□ -0.79
NIPAL3-202ENST00000339255 COTL1Q14019 142 aa10.15□□□□□ -0.79
NIPAL3-202ENST00000339255 ORMDL2Q53FV1 153 aa10.15□□□□□ -0.79
NIPAL3-202ENST00000339255 TMEM97Q5BJF2 176 aa10.15□□□□□ -0.79
NIPAL3-202ENST00000339255 PHLDA1Q8WV24 401 aaPredicted RBP10.15□□□□□ -0.79
NIPAL3-202ENST00000339255 G0S2P27469 103 aa10.14□□□□□ -0.79
NIPAL3-202ENST00000339255 LAGE3Q14657 143 aa10.14□□□□□ -0.79
NIPAL3-202ENST00000339255 C15orf53Q8NAA6 179 aa10.14□□□□□ -0.79
NIPAL3-202ENST00000339255 ATP6V0E2Q8NHE4 81 aa10.14□□□□□ -0.79
NIPAL3-202ENST00000339255 LINC00310P59036 64 aa10.13□□□□□ -0.79
NIPAL3-202ENST00000339255 NEGR1Q7Z3B1 354 aa10.13□□□□□ -0.79
NIPAL3-202ENST00000339255 URB1-AS1Q96HZ7 61 aa10.13□□□□□ -0.79
NIPAL3-202ENST00000339255 TGP01266 2768 aa10.12□□□□□ -0.79
NIPAL3-202ENST00000339255 TSHBP01222 138 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms