RNA–Protein interactions for RNA: ENST00000337488.10

FIP1L1-202, Transcript of factor interacting with PAPOLA and CPSF1, humanhuman

TSL 1 (best) BASIC

Gene FIP1L1, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIP1L1-202ENST00000337488 IGIPA6NJ69 53 aa13.89□□□□□ -0.19
FIP1L1-202ENST00000337488 RIPPLY3P57055 190 aa13.89□□□□□ -0.19
FIP1L1-202ENST00000337488 TMEM141Q96I45 108 aa13.89□□□□□ -0.19
FIP1L1-202ENST00000337488 TP53TG1Q9Y2A0 90 aa13.89□□□□□ -0.19
FIP1L1-202ENST00000337488 ZNF256Q9Y2P7 627 aaPredicted RBP13.89□□□□□ -0.19
FIP1L1-202ENST00000337488 SORL1Q92673 2214 aa13.88□□□□□ -0.19
FIP1L1-202ENST00000337488 KNCNA6PVL3 124 aa13.88□□□□□ -0.19
FIP1L1-202ENST00000337488 H3BMM0 161 aa13.88□□□□□ -0.19
FIP1L1-202ENST00000337488 K7EP13 123 aa13.88□□□□□ -0.19
FIP1L1-202ENST00000337488 ZNF56Q15929 161 aa13.88□□□□□ -0.19
FIP1L1-202ENST00000337488 ZNF876PQ49A33 203 aa13.88□□□□□ -0.19
FIP1L1-202ENST00000337488 MAPKAPK5-AS1Q8N8E1 139 aa13.88□□□□□ -0.19
FIP1L1-202ENST00000337488 CITED2Q99967 270 aaPredicted RBP13.88□□□□□ -0.19
FIP1L1-202ENST00000337488 C2CD3Q4AC94 2353 aa13.88□□□□□ -0.19
FIP1L1-202ENST00000337488 NDUFA7O95182 113 aa13.88□□□□□ -0.19
FIP1L1-202ENST00000337488 TAL2Q16559 108 aa13.88□□□□□ -0.19
FIP1L1-202ENST00000337488 TRPT1Q86TN4 253 aaKnown RBP13.88□□□□□ -0.19
FIP1L1-202ENST00000337488 TIMM17AQ99595 171 aa13.88□□□□□ -0.19
FIP1L1-202ENST00000337488 TM2D2Q9BX73 214 aa13.88□□□□□ -0.19
FIP1L1-202ENST00000337488 OR11H12B2RN74 326 aa13.87□□□□□ -0.19
FIP1L1-202ENST00000337488 GCSHP23434 173 aa13.87□□□□□ -0.19
FIP1L1-202ENST00000337488 TMEM61Q8N0U2 210 aa13.87□□□□□ -0.19
FIP1L1-202ENST00000337488 OR11H2Q8NH07 326 aa13.87□□□□□ -0.19
FIP1L1-202ENST00000337488 MORN3Q6PF18 240 aaPredicted RBP13.86□□□□□ -0.19
FIP1L1-202ENST00000337488 RAX2Q96IS3 184 aa13.86□□□□□ -0.19
FIP1L1-202ENST00000337488 TSHBP01222 138 aa13.86□□□□□ -0.19
FIP1L1-202ENST00000337488 RBMY1A1P0DJD3 496 aaKnown RBP13.86□□□□□ -0.19
FIP1L1-202ENST00000337488 RBMY1CP0DJD4 496 aa13.86□□□□□ -0.19
FIP1L1-202ENST00000337488 RBMY1FQ15415 496 aaKnown RBP13.86□□□□□ -0.19
FIP1L1-202ENST00000337488 PAPPA-AS1Q5QFB9 102 aa13.86□□□□□ -0.19
FIP1L1-202ENST00000337488 DLX4Q92988 240 aaPredicted RBP13.86□□□□□ -0.19
FIP1L1-202ENST00000337488 CYSRT1A8MQ03 144 aa13.85□□□□□ -0.19
FIP1L1-202ENST00000337488 E9PLD3 99 aa13.85□□□□□ -0.19
FIP1L1-202ENST00000337488 CRLF1O75462 422 aa13.85□□□□□ -0.19
FIP1L1-202ENST00000337488 RHOHQ15669 191 aa13.85□□□□□ -0.19
FIP1L1-202ENST00000337488 CEND1Q8N111 149 aa13.85□□□□□ -0.19
FIP1L1-202ENST00000337488 SMIM13P0DJ93 91 aa13.85□□□□□ -0.19
FIP1L1-202ENST00000337488 FXYD2P54710 66 aa13.85□□□□□ -0.19
FIP1L1-202ENST00000337488 PMVKQ15126 192 aa13.85□□□□□ -0.19
FIP1L1-202ENST00000337488 DYNLRB2Q8TF09 96 aa13.85□□□□□ -0.19
FIP1L1-202ENST00000337488 PROK1P58294 105 aa13.84□□□□□ -0.19
FIP1L1-202ENST00000337488 NSUN5P1Q3KNT7 163 aa13.84□□□□□ -0.19
FIP1L1-202ENST00000337488 SPAG8Q99932 426 aaPredicted RBP13.84□□□□□ -0.19
FIP1L1-202ENST00000337488 EDA2RQ9HAV5 297 aa13.84□□□□□ -0.19
FIP1L1-202ENST00000337488 MYMXA0A1B0GTQ4 84 aa13.83□□□□□ -0.19
FIP1L1-202ENST00000337488 H3BUT2 72 aa13.83□□□□□ -0.19
FIP1L1-202ENST00000337488 DEFB114Q30KQ6 69 aa13.83□□□□□ -0.19
FIP1L1-202ENST00000337488 NIPBLQ6KC79 2804 aaeCLIP13.83□□□□□ -0.19
FIP1L1-202ENST00000337488 GAGE10A6NGK3 116 aa13.83□□□□□ -0.2
FIP1L1-202ENST00000337488 RPL39P62891 51 aaKnown RBP13.83□□□□□ -0.2
FIP1L1-202ENST00000337488 PIK3CD-AS1Q5SR53 167 aa13.83□□□□□ -0.2
FIP1L1-202ENST00000337488 GTF2H5Q6ZYL4 71 aa13.83□□□□□ -0.2
FIP1L1-202ENST00000337488 RBMY1BA6NDE4 496 aaKnown RBP13.82□□□□□ -0.2
FIP1L1-202ENST00000337488 RBMY1EA6NEQ0 496 aaKnown RBP13.82□□□□□ -0.2
FIP1L1-202ENST00000337488 RBMY1DP0C7P1 496 aaKnown RBP13.82□□□□□ -0.2
FIP1L1-202ENST00000337488 CST9LQ9H4G1 147 aa13.82□□□□□ -0.2
FIP1L1-202ENST00000337488 MAP6D1Q9H9H5 199 aa13.82□□□□□ -0.2
FIP1L1-202ENST00000337488 TSSC4Q9Y5U2 329 aaPredicted RBP13.82□□□□□ -0.2
FIP1L1-202ENST00000337488 IGLV4-69A0A075B6H9 119 aa13.81□□□□□ -0.2
FIP1L1-202ENST00000337488 RAB37Q96AX2 223 aa13.81□□□□□ -0.2
FIP1L1-202ENST00000337488 PRADC1Q9BSG0 188 aa13.81□□□□□ -0.2
FIP1L1-202ENST00000337488 CCL24O00175 119 aa13.81□□□□□ -0.2
FIP1L1-202ENST00000337488 KRTAP10-3P60369 221 aa13.81□□□□□ -0.2
FIP1L1-202ENST00000337488 FHL3Q13643 280 aa13.81□□□□□ -0.2
FIP1L1-202ENST00000337488 UFSP1Q6NVU6 142 aa13.81□□□□□ -0.2
FIP1L1-202ENST00000337488 PTH2Q96A98 100 aa13.81□□□□□ -0.2
FIP1L1-202ENST00000337488 I3L3M4 83 aa13.8□□□□□ -0.2
FIP1L1-202ENST00000337488 LINC00467Q9BRT7 94 aa13.8□□□□□ -0.2
FIP1L1-202ENST00000337488 A0A1W2PPM0 123 aa13.79□□□□□ -0.2
FIP1L1-202ENST00000337488 C11orf86A6NJI1 115 aa13.79□□□□□ -0.2
FIP1L1-202ENST00000337488 K7EP34 96 aa13.79□□□□□ -0.2
FIP1L1-202ENST00000337488 M0R2P5 195 aa13.79□□□□□ -0.2
FIP1L1-202ENST00000337488 HTN1P15515 57 aa13.79□□□□□ -0.2
FIP1L1-202ENST00000337488 CD300EQ496F6 205 aaPredicted RBP13.79□□□□□ -0.2
FIP1L1-202ENST00000337488 DEFB104AQ8WTQ1 72 aa13.79□□□□□ -0.2
FIP1L1-202ENST00000337488 CLUHP3Q96NS8 147 aa13.79□□□□□ -0.2
FIP1L1-202ENST00000337488 HIST1H4GQ99525 98 aa13.79□□□□□ -0.2
FIP1L1-202ENST00000337488 JMJD1CQ15652 2540 aa13.79□□□□□ -0.2
FIP1L1-202ENST00000337488 TRAV25A0A0B4J276 109 aa13.78□□□□□ -0.2
FIP1L1-202ENST00000337488 ADARB2-AS1A8MUL3 147 aa13.78□□□□□ -0.2
FIP1L1-202ENST00000337488 A8MWV9 139 aa13.78□□□□□ -0.2
FIP1L1-202ENST00000337488 HERVK_113P61574 105 aa13.78□□□□□ -0.2
FIP1L1-202ENST00000337488 ZNF415Q09FC8 603 aa13.78□□□□□ -0.2
FIP1L1-202ENST00000337488 PHLDA1Q8WV24 401 aaPredicted RBP13.78□□□□□ -0.2
FIP1L1-202ENST00000337488 GAGE12BA1L429 117 aa13.78□□□□□ -0.2
FIP1L1-202ENST00000337488 TEP1Q99973 2627 aaKnown RBP13.77□□□□□ -0.2
FIP1L1-202ENST00000337488 TRBV7-3A0A075B6L6 115 aa13.77□□□□□ -0.21
FIP1L1-202ENST00000337488 P0DMU3 169 aa13.77□□□□□ -0.21
FIP1L1-202ENST00000337488 FAM231AP0DMU4 169 aa13.77□□□□□ -0.21
FIP1L1-202ENST00000337488 FAM231CP0DMU5 169 aa13.77□□□□□ -0.21
FIP1L1-202ENST00000337488 C20orf203Q8NBC4 194 aa13.77□□□□□ -0.21
FIP1L1-202ENST00000337488 RNASE8Q8TDE3 154 aaKnown RBP13.77□□□□□ -0.21
FIP1L1-202ENST00000337488 NHP2Q9NX24 153 aaKnown RBP13.77□□□□□ -0.21
FIP1L1-202ENST00000337488 SAMD5Q5TGI4 173 aa13.76□□□□□ -0.21
FIP1L1-202ENST00000337488 NAA38Q9BRA0 125 aaKnown RBP13.76□□□□□ -0.21
FIP1L1-202ENST00000337488 FABP2P12104 132 aa13.76□□□□□ -0.21
FIP1L1-202ENST00000337488 ZNF815PA8K554 130 aa13.75□□□□□ -0.21
FIP1L1-202ENST00000337488 TENM1Q9UKZ4 2725 aa13.75□□□□□ -0.21
FIP1L1-202ENST00000337488 INSP01308 110 aa13.75□□□□□ -0.21
FIP1L1-202ENST00000337488 OR5A1Q8NGJ0 315 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 1123.3 ms