RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 GAGE1Q13065 139 aa6.5□□□□□ -1.37
SNCA-201ENST00000336904 RNF151Q2KHN1 245 aa6.5□□□□□ -1.37
SNCA-201ENST00000336904 NSUN5P1Q3KNT7 163 aa6.5□□□□□ -1.37
SNCA-201ENST00000336904 ORMDL2Q53FV1 153 aa6.5□□□□□ -1.37
SNCA-201ENST00000336904 SPAG8Q99932 426 aaPredicted RBP6.5□□□□□ -1.37
SNCA-201ENST00000336904 ATRQ13535 2644 aa6.49□□□□□ -1.37
SNCA-201ENST00000336904 C11orf86A6NJI1 115 aa6.49□□□□□ -1.37
SNCA-201ENST00000336904 H3BMM0 161 aa6.49□□□□□ -1.37
SNCA-201ENST00000336904 NEXN-AS1Q8NBZ9 246 aa6.49□□□□□ -1.37
SNCA-201ENST00000336904 C9orf85Q96MD7 179 aa6.49□□□□□ -1.37
SNCA-201ENST00000336904 LINC01587Q99440 93 aa6.49□□□□□ -1.37
SNCA-201ENST00000336904 CYSLTR1Q9Y271 337 aa6.49□□□□□ -1.37
SNCA-201ENST00000336904 F8VRH5 84 aa6.49□□□□□ -1.37
SNCA-201ENST00000336904 TMEM170BQ5T4T1 132 aa6.49□□□□□ -1.37
SNCA-201ENST00000336904 FOXI2Q6ZQN5 318 aa6.49□□□□□ -1.37
SNCA-201ENST00000336904 PLEKHB2Q96CS7 222 aa6.49□□□□□ -1.37
SNCA-201ENST00000336904 H7C1H1 209 aa6.48□□□□□ -1.37
SNCA-201ENST00000336904 M0QY20 66 aa6.48□□□□□ -1.37
SNCA-201ENST00000336904 LGALS9O00182 355 aa6.48□□□□□ -1.37
SNCA-201ENST00000336904 C20orf78Q9BR46 151 aa6.48□□□□□ -1.37
SNCA-201ENST00000336904 FLNBO75369 2602 aaKnown RBP6.48□□□□□ -1.37
SNCA-201ENST00000336904 HSD52Q0P140 79 aa6.48□□□□□ -1.37
SNCA-201ENST00000336904 KIR2DL4Q99706 377 aa6.48□□□□□ -1.37
SNCA-201ENST00000336904 PRADC1Q9BSG0 188 aa6.48□□□□□ -1.37
SNCA-201ENST00000336904 POLR2KP53803 58 aaKnown RBP6.47□□□□□ -1.37
SNCA-201ENST00000336904 DEFB114Q30KQ6 69 aa6.47□□□□□ -1.37
SNCA-201ENST00000336904 C4orf3Q8WVX3 66 aa6.47□□□□□ -1.37
SNCA-201ENST00000336904 HIST1H4GQ99525 98 aa6.47□□□□□ -1.37
SNCA-201ENST00000336904 ADARB2-AS1A8MUL3 147 aa6.47□□□□□ -1.37
SNCA-201ENST00000336904 NXPH4O95158 308 aa6.47□□□□□ -1.37
SNCA-201ENST00000336904 HLA-DRB4P13762 266 aa6.47□□□□□ -1.37
SNCA-201ENST00000336904 RIPPLY3P57055 190 aa6.47□□□□□ -1.37
SNCA-201ENST00000336904 SCGB2A2Q13296 93 aa6.47□□□□□ -1.37
SNCA-201ENST00000336904 HLA-DRB4X5D2U9 266 aa6.47□□□□□ -1.37
SNCA-201ENST00000336904 OR11H12B2RN74 326 aa6.47□□□□□ -1.37
SNCA-201ENST00000336904 RPL35AP18077 110 aaKnown RBP6.47□□□□□ -1.37
SNCA-201ENST00000336904 KRTAP1-1Q07627 177 aa6.47□□□□□ -1.37
SNCA-201ENST00000336904 C21orf62-AS1Q17RA5 79 aa6.47□□□□□ -1.37
SNCA-201ENST00000336904 ODF3L2Q3SX64 289 aa6.47□□□□□ -1.37
SNCA-201ENST00000336904 SYT8Q8NBV8 401 aa6.47□□□□□ -1.37
SNCA-201ENST00000336904 OR11H2Q8NH07 326 aa6.47□□□□□ -1.37
SNCA-201ENST00000336904 TRRAPQ9Y4A5 3859 aa6.47□□□□□ -1.37
SNCA-201ENST00000336904 PRSS47A8MTI9 375 aa6.46□□□□□ -1.38
SNCA-201ENST00000336904 CCL24O00175 119 aa6.46□□□□□ -1.38
SNCA-201ENST00000336904 TSPEAR-AS2P59090 65 aa6.46□□□□□ -1.38
SNCA-201ENST00000336904 ZNRF2Q8NHG8 242 aa6.46□□□□□ -1.38
SNCA-201ENST00000336904 PEMTQ9UBM1 199 aa6.46□□□□□ -1.38
SNCA-201ENST00000336904 IGLV4-69A0A075B6H9 119 aa6.46□□□□□ -1.38
SNCA-201ENST00000336904 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.46□□□□□ -1.38
SNCA-201ENST00000336904 IGKV2-29A2NJV5 120 aaPredicted RBP6.46□□□□□ -1.38
SNCA-201ENST00000336904 TMEM89A2RUT3 159 aa6.46□□□□□ -1.38
SNCA-201ENST00000336904 ZNF815PA8K554 130 aa6.46□□□□□ -1.38
SNCA-201ENST00000336904 SAP30O75446 220 aa6.46□□□□□ -1.38
SNCA-201ENST00000336904 MED14OSP0DP75 135 aa6.46□□□□□ -1.38
SNCA-201ENST00000336904 SCGB1D4Q6XE38 83 aa6.46□□□□□ -1.38
SNCA-201ENST00000336904 VCYO14598 125 aa6.45□□□□□ -1.38
SNCA-201ENST00000336904 PLNP26678 52 aa6.45□□□□□ -1.38
SNCA-201ENST00000336904 LRRC75A-AS1Q8N1F1 130 aa6.45□□□□□ -1.38
SNCA-201ENST00000336904 TRBV7-9A0A0J9YWB2 115 aa6.45□□□□□ -1.38
SNCA-201ENST00000336904 A6NDN8 102 aa6.45□□□□□ -1.38
SNCA-201ENST00000336904 GAGE10A6NGK3 116 aa6.45□□□□□ -1.38
SNCA-201ENST00000336904 IGIPA6NJ69 53 aa6.45□□□□□ -1.38
SNCA-201ENST00000336904 A8MZ25 164 aa6.45□□□□□ -1.38
SNCA-201ENST00000336904 HIVEP1P15822 2718 aa6.45□□□□□ -1.38
SNCA-201ENST00000336904 RNF152Q8N8N0 203 aa6.45□□□□□ -1.38
SNCA-201ENST00000336904 LINC01006Q8NI28 216 aa6.45□□□□□ -1.38
SNCA-201ENST00000336904 TEP1Q99973 2627 aaKnown RBP6.45□□□□□ -1.38
SNCA-201ENST00000336904 Q8N2B8 174 aa6.44□□□□□ -1.38
SNCA-201ENST00000336904 A0A0J9YXV3 536 aa6.44□□□□□ -1.38
SNCA-201ENST00000336904 SEC11AP67812 179 aa6.44□□□□□ -1.38
SNCA-201ENST00000336904 STHQ8IWL8 128 aa6.44□□□□□ -1.38
SNCA-201ENST00000336904 CST9LQ9H4G1 147 aa6.44□□□□□ -1.38
SNCA-201ENST00000336904 NSD1Q96L73 2696 aaPredicted RBP6.44□□□□□ -1.38
SNCA-201ENST00000336904 TRGV1A0A0A0MS02 117 aa6.44□□□□□ -1.38
SNCA-201ENST00000336904 J3QKU1 62 aa6.44□□□□□ -1.38
SNCA-201ENST00000336904 CEND1Q8N111 149 aa6.44□□□□□ -1.38
SNCA-201ENST00000336904 SPATA3Q8NHX4 192 aa6.44□□□□□ -1.38
SNCA-201ENST00000336904 TRGV11A0A075B6L2 103 aa6.43□□□□□ -1.38
SNCA-201ENST00000336904 GAGE12BA1L429 117 aa6.43□□□□□ -1.38
SNCA-201ENST00000336904 C9orf118A6NHY6 69 aa6.43□□□□□ -1.38
SNCA-201ENST00000336904 TRBV27A0A0K0K1C4 114 aa6.43□□□□□ -1.38
SNCA-201ENST00000336904 MYMXA0A1B0GTQ4 84 aa6.43□□□□□ -1.38
SNCA-201ENST00000336904 SMIM13P0DJ93 91 aa6.43□□□□□ -1.38
SNCA-201ENST00000336904 PMVKQ15126 192 aa6.43□□□□□ -1.38
SNCA-201ENST00000336904 SPCS1Q9Y6A9 102 aa6.43□□□□□ -1.38
SNCA-201ENST00000336904 TRAV12-1A0A0B4J245 112 aa6.42□□□□□ -1.38
SNCA-201ENST00000336904 APOMO95445 188 aa6.42□□□□□ -1.38
SNCA-201ENST00000336904 SAMD13Q5VXD3 122 aa6.42□□□□□ -1.38
SNCA-201ENST00000336904 TRPT1Q86TN4 253 aaKnown RBP6.42□□□□□ -1.38
SNCA-201ENST00000336904 SPXQ9BT56 116 aa6.42□□□□□ -1.38
SNCA-201ENST00000336904 TRAV8-3A0A0A6YYJ7 113 aa6.42□□□□□ -1.38
SNCA-201ENST00000336904 H3BRM9 83 aa6.42□□□□□ -1.38
SNCA-201ENST00000336904 NDUFA7O95182 113 aa6.42□□□□□ -1.38
SNCA-201ENST00000336904 NPC2P61916 151 aa6.42□□□□□ -1.38
SNCA-201ENST00000336904 SRSF9Q13242 221 aaKnown RBP eCLIP6.42□□□□□ -1.38
SNCA-201ENST00000336904 SAMD5Q5TGI4 173 aa6.42□□□□□ -1.38
SNCA-201ENST00000336904 CFAP126Q5VTH2 177 aa6.42□□□□□ -1.38
SNCA-201ENST00000336904 Q6ZTI0 123 aa6.42□□□□□ -1.38
SNCA-201ENST00000336904 POM121L12Q8N7R1 296 aa6.42□□□□□ -1.38
SNCA-201ENST00000336904 ZNF479Q96JC4 524 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms