RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 TRAV13-1A0A0B4J241 112 aa6.25□□□□□ -1.41
HPS4-201ENST00000336873 TRAV8-2A0A0B4J237 113 aa6.24□□□□□ -1.41
HPS4-201ENST00000336873 GAGE12JA6NER3 117 aa6.24□□□□□ -1.41
HPS4-201ENST00000336873 H3BRM9 83 aa6.24□□□□□ -1.41
HPS4-201ENST00000336873 GAGE7O76087 117 aa6.24□□□□□ -1.41
HPS4-201ENST00000336873 GAGE12FP0CL80 117 aa6.24□□□□□ -1.41
HPS4-201ENST00000336873 GAGE12GP0CL81 117 aa6.24□□□□□ -1.41
HPS4-201ENST00000336873 GAGE12IP0CL82 117 aa6.24□□□□□ -1.41
HPS4-201ENST00000336873 GAGE4Q13068 117 aa6.24□□□□□ -1.41
HPS4-201ENST00000336873 NSUN5P1Q3KNT7 163 aa6.24□□□□□ -1.41
HPS4-201ENST00000336873 RNF185Q96GF1 192 aa6.24□□□□□ -1.41
HPS4-201ENST00000336873 MAST4O15021 2626 aa6.24□□□□□ -1.41
HPS4-201ENST00000336873 TRGV1A0A0A0MS02 117 aa6.24□□□□□ -1.41
HPS4-201ENST00000336873 PROK1P58294 105 aa6.24□□□□□ -1.41
HPS4-201ENST00000336873 DAND5Q8N907 189 aa6.24□□□□□ -1.41
HPS4-201ENST00000336873 GATD1Q8NB37 220 aa6.24□□□□□ -1.41
HPS4-201ENST00000336873 PTH2Q96A98 100 aa6.24□□□□□ -1.41
HPS4-201ENST00000336873 IGHV7-4-1A0A0J9YVY3 117 aa6.24□□□□□ -1.41
HPS4-201ENST00000336873 A0A1W2PPM0 123 aa6.24□□□□□ -1.41
HPS4-201ENST00000336873 MRPS12O15235 138 aaKnown RBP6.24□□□□□ -1.41
HPS4-201ENST00000336873 LYRM7Q5U5X0 104 aa6.24□□□□□ -1.41
HPS4-201ENST00000336873 C11orf71Q6IPW1 123 aa6.24□□□□□ -1.41
HPS4-201ENST00000336873 C2orf91Q6ZV80 131 aa6.24□□□□□ -1.41
HPS4-201ENST00000336873 Q8N1Y9 231 aa6.24□□□□□ -1.41
HPS4-201ENST00000336873 CLPSL1A2RUU4 121 aa6.23□□□□□ -1.41
HPS4-201ENST00000336873 F8VRH5 84 aa6.23□□□□□ -1.41
HPS4-201ENST00000336873 IGHG4P01861 327 aa6.23□□□□□ -1.41
HPS4-201ENST00000336873 RPL32P62910 135 aaKnown RBP6.23□□□□□ -1.41
HPS4-201ENST00000336873 C18orf65Q6ZTR6 163 aa6.23□□□□□ -1.41
HPS4-201ENST00000336873 C1QTNF4Q9BXJ3 329 aa6.23□□□□□ -1.41
HPS4-201ENST00000336873 FAM223BA6NKX1 122 aa6.23□□□□□ -1.41
HPS4-201ENST00000336873 NDUFA4O00483 81 aa6.23□□□□□ -1.41
HPS4-201ENST00000336873 RNASE1P07998 156 aaKnown RBP6.23□□□□□ -1.41
HPS4-201ENST00000336873 IGLC6P0CF74 106 aa6.23□□□□□ -1.41
HPS4-201ENST00000336873 HOXD3P31249 432 aaPredicted RBP6.23□□□□□ -1.41
HPS4-201ENST00000336873 MEIG1Q5JSS6 88 aa6.23□□□□□ -1.41
HPS4-201ENST00000336873 FAM223AQ8IWN6 122 aa6.23□□□□□ -1.41
HPS4-201ENST00000336873 SMPXQ9UHP9 88 aa6.23□□□□□ -1.41
HPS4-201ENST00000336873 TRGV2A0A075B6R0 118 aa6.23□□□□□ -1.41
HPS4-201ENST00000336873 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.23□□□□□ -1.41
HPS4-201ENST00000336873 IGKV2-29A2NJV5 120 aaPredicted RBP6.23□□□□□ -1.41
HPS4-201ENST00000336873 Q96MF0 132 aa6.23□□□□□ -1.41
HPS4-201ENST00000336873 ITPR2Q14571 2701 aa6.23□□□□□ -1.41
HPS4-201ENST00000336873 IGHV4OR15-8A0A075B7B6 117 aa6.22□□□□□ -1.41
HPS4-201ENST00000336873 A0A087WW49 117 aa6.22□□□□□ -1.41
HPS4-201ENST00000336873 A0A096LPF7 62 aa6.22□□□□□ -1.41
HPS4-201ENST00000336873 GATA3P23771 443 aa6.22□□□□□ -1.41
HPS4-201ENST00000336873 LINC01559Q495D7 138 aa6.22□□□□□ -1.41
HPS4-201ENST00000336873 USMG5Q96IX5 58 aa6.22□□□□□ -1.41
HPS4-201ENST00000336873 A0A0J9YXV3 536 aa6.22□□□□□ -1.41
HPS4-201ENST00000336873 TMEM262E9PQX1 116 aa6.22□□□□□ -1.41
HPS4-201ENST00000336873 VCYO14598 125 aa6.22□□□□□ -1.41
HPS4-201ENST00000336873 HTN3P15516 51 aa6.22□□□□□ -1.41
HPS4-201ENST00000336873 A0A087WX48 190 aa6.21□□□□□ -1.41
HPS4-201ENST00000336873 A8MZ25 164 aa6.21□□□□□ -1.41
HPS4-201ENST00000336873 PLNP26678 52 aa6.21□□□□□ -1.41
HPS4-201ENST00000336873 C12orf74Q32Q52 190 aa6.21□□□□□ -1.41
HPS4-201ENST00000336873 SUMO4Q6EEV6 95 aa6.21□□□□□ -1.41
HPS4-201ENST00000336873 CEND1Q8N111 149 aa6.21□□□□□ -1.41
HPS4-201ENST00000336873 M0QXV9 152 aa6.21□□□□□ -1.42
HPS4-201ENST00000336873 STHQ8IWL8 128 aa6.21□□□□□ -1.42
HPS4-201ENST00000336873 C10orf105Q8TEF2 133 aa6.21□□□□□ -1.42
HPS4-201ENST00000336873 RASL10AQ92737 203 aa6.21□□□□□ -1.42
HPS4-201ENST00000336873 C11orf86A6NJI1 115 aa6.21□□□□□ -1.42
HPS4-201ENST00000336873 RRN3P1Q2M238 152 aa6.21□□□□□ -1.42
HPS4-201ENST00000336873 ZNF493Q6ZR52 646 aa6.21□□□□□ -1.42
HPS4-201ENST00000336873 TRAV8-3A0A0A6YYJ7 113 aa6.2□□□□□ -1.42
HPS4-201ENST00000336873 MYMXA0A1B0GTQ4 84 aa6.2□□□□□ -1.42
HPS4-201ENST00000336873 RBAKDNA6NC62 111 aa6.2□□□□□ -1.42
HPS4-201ENST00000336873 MRPL23Q16540 153 aaKnown RBP6.2□□□□□ -1.42
HPS4-201ENST00000336873 PLEKHB2Q96CS7 222 aa6.2□□□□□ -1.42
HPS4-201ENST00000336873 ESM1Q9NQ30 184 aa6.2□□□□□ -1.42
HPS4-201ENST00000336873 DEFB130BP0DP73 79 aa6.2□□□□□ -1.42
HPS4-201ENST00000336873 DEFB130AP0DP74 79 aa6.2□□□□□ -1.42
HPS4-201ENST00000336873 DSCR9P59020 149 aa6.2□□□□□ -1.42
HPS4-201ENST00000336873 ZFAND2AQ8N6M9 145 aa6.2□□□□□ -1.42
HPS4-201ENST00000336873 SPAG8Q99932 426 aaPredicted RBP6.2□□□□□ -1.42
HPS4-201ENST00000336873 CITED2Q99967 270 aaPredicted RBP6.2□□□□□ -1.42
HPS4-201ENST00000336873 C20orf78Q9BR46 151 aa6.2□□□□□ -1.42
HPS4-201ENST00000336873 IGHV1OR15-1A0A075B7D0 117 aa6.2□□□□□ -1.42
HPS4-201ENST00000336873 KRTAP10-9P60411 292 aa6.19□□□□□ -1.42
HPS4-201ENST00000336873 C10orf126Q8N4M7 172 aa6.19□□□□□ -1.42
HPS4-201ENST00000336873 Q8N6K4 173 aa6.19□□□□□ -1.42
HPS4-201ENST00000336873 BAALCQ8WXS3 180 aa6.19□□□□□ -1.42
HPS4-201ENST00000336873 C9JAW5 83 aa6.19□□□□□ -1.42
HPS4-201ENST00000336873 ZFP2Q6ZN57 461 aa6.19□□□□□ -1.42
HPS4-201ENST00000336873 LINC01356Q8N9X3 169 aa6.19□□□□□ -1.42
HPS4-201ENST00000336873 ZNRF2Q8NHG8 242 aa6.19□□□□□ -1.42
HPS4-201ENST00000336873 PPP1R17O96001 155 aa6.19□□□□□ -1.42
HPS4-201ENST00000336873 MT-ATP8P03928 68 aa6.19□□□□□ -1.42
HPS4-201ENST00000336873 C9orf47Q6ZRZ4 202 aa6.19□□□□□ -1.42
HPS4-201ENST00000336873 TMEM61Q8N0U2 210 aa6.18□□□□□ -1.42
HPS4-201ENST00000336873 MXRA5Q9NR99 2828 aa6.18□□□□□ -1.42
HPS4-201ENST00000336873 TRBV6-1A0A0K0K1D8 114 aa6.18□□□□□ -1.42
HPS4-201ENST00000336873 F8W1H4 67 aa6.18□□□□□ -1.42
HPS4-201ENST00000336873 UBE2L6O14933 153 aa6.18□□□□□ -1.42
HPS4-201ENST00000336873 IGHG2P01859 326 aa6.18□□□□□ -1.42
HPS4-201ENST00000336873 PMVKQ15126 192 aa6.18□□□□□ -1.42
HPS4-201ENST00000336873 CLPSL2Q6UWE3 100 aa6.18□□□□□ -1.42
HPS4-201ENST00000336873 OR13C6PQ8NH95 151 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms