RNA–Protein interactions for RNA: ENST00000335387.9

RC3H2-201, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 1 (best) BASIC

Gene RC3H2, Length 3,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-201ENST00000335387 SPTBN1Q01082 2364 aaKnown RBP9.83□□□□□ -0.84
RC3H2-201ENST00000335387 CD300EQ496F6 205 aaPredicted RBP9.82□□□□□ -0.84
RC3H2-201ENST00000335387 PGPEP1Q9NXJ5 209 aa9.82□□□□□ -0.84
RC3H2-201ENST00000335387 LYRM7Q5U5X0 104 aa9.82□□□□□ -0.84
RC3H2-201ENST00000335387 DOPEY2Q9Y3R5 2298 aa9.82□□□□□ -0.84
RC3H2-201ENST00000335387 J3QQQ9 107 aa9.81□□□□□ -0.84
RC3H2-201ENST00000335387 J3QR89 54 aa9.81□□□□□ -0.84
RC3H2-201ENST00000335387 RBMY1A1P0DJD3 496 aaKnown RBP9.81□□□□□ -0.84
RC3H2-201ENST00000335387 RBMY1CP0DJD4 496 aa9.81□□□□□ -0.84
RC3H2-201ENST00000335387 SMCPP49901 116 aaPredicted RBP9.81□□□□□ -0.84
RC3H2-201ENST00000335387 RBMY1FQ15415 496 aaKnown RBP9.81□□□□□ -0.84
RC3H2-201ENST00000335387 C10orf99Q6UWK7 81 aa9.81□□□□□ -0.84
RC3H2-201ENST00000335387 KLHL30-AS1Q8NEE0 82 aa9.81□□□□□ -0.84
RC3H2-201ENST00000335387 IGLV4-3A0A075B6K6 122 aa9.81□□□□□ -0.84
RC3H2-201ENST00000335387 TRBV20-1A0A075B6N2 111 aa9.81□□□□□ -0.84
RC3H2-201ENST00000335387 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.81□□□□□ -0.842e-8■■■■■ 46.5
RC3H2-201ENST00000335387 IGKV3-7A0A075B6H7 116 aa9.81□□□□□ -0.84
RC3H2-201ENST00000335387 CFC1BP0CG36 223 aa9.81□□□□□ -0.84
RC3H2-201ENST00000335387 CFC1P0CG37 223 aa9.81□□□□□ -0.84
RC3H2-201ENST00000335387 ZNF22P17026 224 aaPredicted RBP9.81□□□□□ -0.84
RC3H2-201ENST00000335387 HOXD3P31249 432 aaPredicted RBP9.81□□□□□ -0.84
RC3H2-201ENST00000335387 MRPS36P82909 103 aaKnown RBP9.81□□□□□ -0.84
RC3H2-201ENST00000335387 A0A0B4J2C4 111 aa9.8□□□□□ -0.84
RC3H2-201ENST00000335387 RHODO00212 210 aa9.8□□□□□ -0.84
RC3H2-201ENST00000335387 SCGB1D4Q6XE38 83 aa9.8□□□□□ -0.84
RC3H2-201ENST00000335387 CR1P17927 2039 aa9.8□□□□□ -0.84
RC3H2-201ENST00000335387 RNF183Q96D59 192 aa9.8□□□□□ -0.84
RC3H2-201ENST00000335387 C1QTNF4Q9BXJ3 329 aa9.8□□□□□ -0.84
RC3H2-201ENST00000335387 C10orf126Q8N4M7 172 aa9.79□□□□□ -0.84
RC3H2-201ENST00000335387 MRPL16Q9NX20 251 aaKnown RBP9.79□□□□□ -0.84
RC3H2-201ENST00000335387 TRAV12-2A0A075B6T6 113 aa9.79□□□□□ -0.84
RC3H2-201ENST00000335387 ZNF56Q15929 161 aa9.79□□□□□ -0.84
RC3H2-201ENST00000335387 TMEM238C9JI98 176 aa9.79□□□□□ -0.84
RC3H2-201ENST00000335387 F5H697 171 aa9.79□□□□□ -0.84
RC3H2-201ENST00000335387 M0R2P5 195 aa9.79□□□□□ -0.84
RC3H2-201ENST00000335387 SYNJ2BPP57105 145 aa9.79□□□□□ -0.84
RC3H2-201ENST00000335387 SPINK13Q1W4C9 94 aa9.79□□□□□ -0.84
RC3H2-201ENST00000335387 BEAN1Q3B7T3 259 aa9.79□□□□□ -0.84
RC3H2-201ENST00000335387 A8MWV9 139 aa9.78□□□□□ -0.84
RC3H2-201ENST00000335387 RPL24P83731 157 aaKnown RBP9.78□□□□□ -0.84
RC3H2-201ENST00000335387 SCGB2A2Q13296 93 aa9.78□□□□□ -0.84
RC3H2-201ENST00000335387 NACAE9PAV3 2078 aa9.78□□□□□ -0.84
RC3H2-201ENST00000335387 USP9YO00507 2555 aaPredicted RBP9.78□□□□□ -0.84
RC3H2-201ENST00000335387 GAGE12HA6NDE8 117 aa9.78□□□□□ -0.84
RC3H2-201ENST00000335387 H3BMM0 161 aa9.78□□□□□ -0.84
RC3H2-201ENST00000335387 SRSF9Q13242 221 aaKnown RBP eCLIP9.78□□□□□ -0.84
RC3H2-201ENST00000335387 WFDC12Q8WWY7 111 aa9.78□□□□□ -0.84
RC3H2-201ENST00000335387 PRRC2AP48634 2157 aaKnown RBP9.78□□□□□ -0.84
RC3H2-201ENST00000335387 CYSRT1A8MQ03 144 aa9.77□□□□□ -0.84
RC3H2-201ENST00000335387 EIF4EBP3O60516 100 aaPredicted RBP9.77□□□□□ -0.84
RC3H2-201ENST00000335387 TMEM263Q8WUH6 116 aaKnown RBP9.77□□□□□ -0.84
RC3H2-201ENST00000335387 DNAJC30Q96LL9 226 aa9.77□□□□□ -0.84
RC3H2-201ENST00000335387 LITAFQ99732 161 aa9.77□□□□□ -0.85
RC3H2-201ENST00000335387 AKAP9Q99996 3911 aa9.77□□□□□ -0.85
RC3H2-201ENST00000335387 RBMY1BA6NDE4 496 aaKnown RBP9.76□□□□□ -0.85
RC3H2-201ENST00000335387 RBMY1EA6NEQ0 496 aaKnown RBP9.76□□□□□ -0.85
RC3H2-201ENST00000335387 RBMY1DP0C7P1 496 aaKnown RBP9.76□□□□□ -0.85
RC3H2-201ENST00000335387 IGHV4-31P0DP07 118 aa9.76□□□□□ -0.85
RC3H2-201ENST00000335387 FAM19A3Q7Z5A8 133 aa9.76□□□□□ -0.85
RC3H2-201ENST00000335387 LRRC75A-AS1Q8N1F1 130 aa9.76□□□□□ -0.85
RC3H2-201ENST00000335387 IL17DQ8TAD2 202 aa9.76□□□□□ -0.85
RC3H2-201ENST00000335387 C4orf3Q8WVX3 66 aa9.76□□□□□ -0.85
RC3H2-201ENST00000335387 SELENOKQ9Y6D0 94 aa9.76□□□□□ -0.85
RC3H2-201ENST00000335387 MED13LQ71F56 2210 aa9.76□□□□□ -0.85
RC3H2-201ENST00000335387 LGALS3P17931 250 aaKnown RBP9.76□□□□□ -0.85
RC3H2-201ENST00000335387 FOXI1Q12951 378 aa9.76□□□□□ -0.85
RC3H2-201ENST00000335387 C11orf72Q8NBR9 251 aa9.76□□□□□ -0.85
RC3H2-201ENST00000335387 SIGMAR1Q99720 223 aa9.76□□□□□ -0.85
RC3H2-201ENST00000335387 SPANXA1Q9NS26 97 aa9.76□□□□□ -0.85
RC3H2-201ENST00000335387 PRO1854Q9UHT4 67 aa9.76□□□□□ -0.85
RC3H2-201ENST00000335387 USP9XQ93008 2570 aaPredicted RBP9.76□□□□□ -0.85
RC3H2-201ENST00000335387 ETDBQ3ZM63 59 aa9.76□□□□□ -0.85
RC3H2-201ENST00000335387 TMEM170BQ5T4T1 132 aa9.76□□□□□ -0.85
RC3H2-201ENST00000335387 TCTEX1D4Q5JR98 221 aa9.75□□□□□ -0.85
RC3H2-201ENST00000335387 FAM74A4Q5TZK3 123 aa9.75□□□□□ -0.85
RC3H2-201ENST00000335387 SH2D6Q7Z4S9 175 aa9.75□□□□□ -0.85
RC3H2-201ENST00000335387 SPANXDQ9BXN6 97 aa9.75□□□□□ -0.85
RC3H2-201ENST00000335387 VCX2Q9H322 139 aa9.75□□□□□ -0.85
RC3H2-201ENST00000335387 SPANXCQ9NY87 97 aa9.75□□□□□ -0.85
RC3H2-201ENST00000335387 TINCRA0A1B0GVN0 87 aa9.75□□□□□ -0.85
RC3H2-201ENST00000335387 CHCHD7Q9BUK0 85 aa9.75□□□□□ -0.85
RC3H2-201ENST00000335387 TSSC4Q9Y5U2 329 aaPredicted RBP9.75□□□□□ -0.85
RC3H2-201ENST00000335387 IGLV5-45A0A087WSX0 123 aa9.74□□□□□ -0.85
RC3H2-201ENST00000335387 LRRK2Q5S007 2527 aa9.74□□□□□ -0.85
RC3H2-201ENST00000335387 TIMM21Q9BVV7 248 aa9.74□□□□□ -0.85
RC3H2-201ENST00000335387 IGHV3-33P01772 117 aa9.74□□□□□ -0.85
RC3H2-201ENST00000335387 EMP1P54849 157 aa9.74□□□□□ -0.85
RC3H2-201ENST00000335387 KRTAP21-3Q3LHN1 58 aa9.74□□□□□ -0.85
RC3H2-201ENST00000335387 TMEM86BQ8N661 226 aa9.74□□□□□ -0.85
RC3H2-201ENST00000335387 SPXQ9BT56 116 aa9.74□□□□□ -0.85
RC3H2-201ENST00000335387 BEX4Q9NWD9 120 aaPredicted RBP9.74□□□□□ -0.85
RC3H2-201ENST00000335387 CELSR2Q9HCU4 2923 aa9.73□□□□□ -0.85
RC3H2-201ENST00000335387 TIMM17BO60830 172 aa9.73□□□□□ -0.85
RC3H2-201ENST00000335387 TCL1BO95988 128 aa9.73□□□□□ -0.85
RC3H2-201ENST00000335387 ZNF415Q09FC8 603 aa9.73□□□□□ -0.85
RC3H2-201ENST00000335387 PEMTQ9UBM1 199 aa9.73□□□□□ -0.85
RC3H2-201ENST00000335387 UBE2D4Q9Y2X8 147 aa9.73□□□□□ -0.85
RC3H2-201ENST00000335387 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.73□□□□□ -0.85
RC3H2-201ENST00000335387 RS1O15537 224 aa9.73□□□□□ -0.85
RC3H2-201ENST00000335387 FLNBO75369 2602 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms