RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 RNF185Q96GF1 192 aa16.78■□□□□ 0.28
TSEN54-201ENST00000333213 JPT2Q9H910 190 aa16.78■□□□□ 0.28
TSEN54-201ENST00000333213 VAMP3Q15836 100 aa16.78■□□□□ 0.28
TSEN54-201ENST00000333213 C2orf91Q6ZV80 131 aa16.78■□□□□ 0.28
TSEN54-201ENST00000333213 H0Y8G0 127 aa16.77■□□□□ 0.28
TSEN54-201ENST00000333213 NCR2O95944 276 aa16.77■□□□□ 0.28
TSEN54-201ENST00000333213 OR4C5Q8NGB2 326 aa16.77■□□□□ 0.28
TSEN54-201ENST00000333213 SIVA1O15304 175 aa16.76■□□□□ 0.27
TSEN54-201ENST00000333213 CKS2P33552 79 aa16.76■□□□□ 0.27
TSEN54-201ENST00000333213 ZNF415Q09FC8 603 aa16.76■□□□□ 0.27
TSEN54-201ENST00000333213 TP73-AS1Q9UF72 201 aa16.76■□□□□ 0.27
TSEN54-201ENST00000333213 PLAC8L1A1L4L8 177 aa16.76■□□□□ 0.27
TSEN54-201ENST00000333213 FGF6P10767 208 aa16.76■□□□□ 0.27
TSEN54-201ENST00000333213 APOC4P55056 127 aa16.76■□□□□ 0.27
TSEN54-201ENST00000333213 IL17DQ8TAD2 202 aa16.76■□□□□ 0.27
TSEN54-201ENST00000333213 ZNF876PQ49A33 203 aa16.75■□□□□ 0.27
TSEN54-201ENST00000333213 C14orf178Q8N769 122 aaPredicted RBP16.75■□□□□ 0.27
TSEN54-201ENST00000333213 TMEM263Q8WUH6 116 aaKnown RBP16.75■□□□□ 0.27
TSEN54-201ENST00000333213 A8MZ25 164 aa16.74■□□□□ 0.27
TSEN54-201ENST00000333213 DEFB135Q30KP9 77 aa16.74■□□□□ 0.27
TSEN54-201ENST00000333213 BOD1L2Q8IYS8 172 aa16.74■□□□□ 0.27
TSEN54-201ENST00000333213 LOC389332A0A1B0GUA5 103 aa16.74■□□□□ 0.27
TSEN54-201ENST00000333213 GAS8-AS1O95177 125 aa16.74■□□□□ 0.27
TSEN54-201ENST00000333213 IFI27L1Q96BM0 104 aa16.74■□□□□ 0.27
TSEN54-201ENST00000333213 KIF25-AS1Q9Y6Z4 181 aa16.74■□□□□ 0.27
TSEN54-201ENST00000333213 X6R8D5 127 aa16.74■□□□□ 0.27
TSEN54-201ENST00000333213 NPYP01303 97 aa16.73■□□□□ 0.27
TSEN54-201ENST00000333213 PRB2P02812 416 aaPredicted RBP16.73■□□□□ 0.27
TSEN54-201ENST00000333213 MAP1LC3AQ9H492 121 aa16.73■□□□□ 0.27
TSEN54-201ENST00000333213 TMEM97Q5BJF2 176 aa16.72■□□□□ 0.27
TSEN54-201ENST00000333213 M0R2P5 195 aa16.72■□□□□ 0.27
TSEN54-201ENST00000333213 LINC00315P59091 139 aa16.72■□□□□ 0.27
TSEN54-201ENST00000333213 RRN3P1Q2M238 152 aa16.72■□□□□ 0.27
TSEN54-201ENST00000333213 NXT2Q9NPJ8 142 aaKnown RBP16.72■□□□□ 0.27
TSEN54-201ENST00000333213 ANKRD39Q53RE8 183 aa16.71■□□□□ 0.27
TSEN54-201ENST00000333213 AP1S3Q96PC3 154 aa16.71■□□□□ 0.27
TSEN54-201ENST00000333213 SMKR1H3BMG3 65 aa16.7■□□□□ 0.26
TSEN54-201ENST00000333213 KPRPQ5T749 579 aaPredicted RBP16.7■□□□□ 0.26
TSEN54-201ENST00000333213 SYT8Q8NBV8 401 aa16.7■□□□□ 0.26
TSEN54-201ENST00000333213 A0A087WWL8 130 aa16.7■□□□□ 0.26
TSEN54-201ENST00000333213 RBX1P62877 108 aa16.7■□□□□ 0.26
TSEN54-201ENST00000333213 SMIM15Q7Z3B0 74 aa16.7■□□□□ 0.26
TSEN54-201ENST00000333213 C16orf74Q96GX8 76 aa16.7■□□□□ 0.26
TSEN54-201ENST00000333213 SPXQ9BT56 116 aa16.7■□□□□ 0.26
TSEN54-201ENST00000333213 DPH3P1Q9H4G8 78 aa16.7■□□□□ 0.26
TSEN54-201ENST00000333213 MRPL16Q9NX20 251 aaKnown RBP16.7■□□□□ 0.26
TSEN54-201ENST00000333213 CRYGDP07320 174 aa16.69■□□□□ 0.26
TSEN54-201ENST00000333213 PTH2Q96A98 100 aa16.69■□□□□ 0.26
TSEN54-201ENST00000333213 TRAV26-2A0A0B4J265 109 aa16.68■□□□□ 0.26
TSEN54-201ENST00000333213 HSD52Q0P140 79 aa16.68■□□□□ 0.26
TSEN54-201ENST00000333213 GATA1P15976 413 aaPredicted RBP16.68■□□□□ 0.26
TSEN54-201ENST00000333213 RASL10AQ92737 203 aa16.68■□□□□ 0.26
TSEN54-201ENST00000333213 A6NDN8 102 aa16.67■□□□□ 0.26
TSEN54-201ENST00000333213 FCER1GP30273 86 aa16.67■□□□□ 0.26
TSEN54-201ENST00000333213 NOP10Q9NPE3 64 aaKnown RBP16.67■□□□□ 0.26
TSEN54-201ENST00000333213 PRSS47A8MTI9 375 aa16.66■□□□□ 0.26
TSEN54-201ENST00000333213 DAZ2Q13117 558 aaKnown RBP16.66■□□□□ 0.26
TSEN54-201ENST00000333213 H3BRM9 83 aa16.66■□□□□ 0.26
TSEN54-201ENST00000333213 PIK3CD-AS1Q5SR53 167 aa16.66■□□□□ 0.26
TSEN54-201ENST00000333213 FAM74A4Q5TZK3 123 aa16.66■□□□□ 0.26
TSEN54-201ENST00000333213 Q6ZTI0 123 aa16.66■□□□□ 0.26
TSEN54-201ENST00000333213 POM121L12Q8N7R1 296 aa16.66■□□□□ 0.26
TSEN54-201ENST00000333213 OR11H2Q8NH07 326 aa16.65■□□□□ 0.26
TSEN54-201ENST00000333213 RNF183Q96D59 192 aa16.65■□□□□ 0.26
TSEN54-201ENST00000333213 ZMAT4Q9H898 229 aa16.65■□□□□ 0.26
TSEN54-201ENST00000333213 K7EIL1 84 aa16.64■□□□□ 0.26
TSEN54-201ENST00000333213 MGPP08493 103 aa16.64■□□□□ 0.26
TSEN54-201ENST00000333213 KRTAP21-3Q3LHN1 58 aa16.64■□□□□ 0.26
TSEN54-201ENST00000333213 AMMECR1LQ6DCA0 310 aa16.64■□□□□ 0.26
TSEN54-201ENST00000333213 TRGV1A0A0A0MS02 117 aa16.64■□□□□ 0.25
TSEN54-201ENST00000333213 TNFRSF6BO95407 300 aa16.64■□□□□ 0.25
TSEN54-201ENST00000333213 UFSP1Q6NVU6 142 aa16.64■□□□□ 0.25
TSEN54-201ENST00000333213 OVOL2Q9BRP0 275 aa16.64■□□□□ 0.25
TSEN54-201ENST00000333213 NACAE9PAV3 2078 aa16.64■□□□□ 0.25
TSEN54-201ENST00000333213 SMIM9A6NGZ8 99 aa16.63■□□□□ 0.25
TSEN54-201ENST00000333213 SMIM17P0DL12 118 aa16.63■□□□□ 0.25
TSEN54-201ENST00000333213 EMP1P54849 157 aa16.63■□□□□ 0.25
TSEN54-201ENST00000333213 CFAP126Q5VTH2 177 aa16.63■□□□□ 0.25
TSEN54-201ENST00000333213 Q8N8P6 123 aa16.62■□□□□ 0.25
TSEN54-201ENST00000333213 NRACQ8N912 160 aa16.62■□□□□ 0.25
TSEN54-201ENST00000333213 TRAV8-6A0A0B4J262 113 aa16.61■□□□□ 0.25
TSEN54-201ENST00000333213 C9orf118A6NHY6 69 aa16.61■□□□□ 0.25
TSEN54-201ENST00000333213 A8MWV9 139 aa16.61■□□□□ 0.25
TSEN54-201ENST00000333213 ATP5LO75964 103 aa16.61■□□□□ 0.25
TSEN54-201ENST00000333213 HIGD1BQ9P298 99 aa16.61■□□□□ 0.25
TSEN54-201ENST00000333213 IGHV3-73A0A0B4J1V6 119 aa16.6■□□□□ 0.25
TSEN54-201ENST00000333213 MRAP2Q96G30 205 aa16.6■□□□□ 0.25
TSEN54-201ENST00000333213 SUMO4Q6EEV6 95 aa16.6■□□□□ 0.25
TSEN54-201ENST00000333213 Q8NAQ8 132 aa16.6■□□□□ 0.25
TSEN54-201ENST00000333213 CST9LQ9H4G1 147 aa16.6■□□□□ 0.25
TSEN54-201ENST00000333213 RETNQ9HD89 108 aa16.6■□□□□ 0.25
TSEN54-201ENST00000333213 IGLV2-18A0A075B6J9 118 aa16.59■□□□□ 0.25
TSEN54-201ENST00000333213 DEFB4AO15263 64 aa16.59■□□□□ 0.25
TSEN54-201ENST00000333213 RS1O15537 224 aa16.59■□□□□ 0.25
TSEN54-201ENST00000333213 ODF1Q14990 250 aa16.59■□□□□ 0.25
TSEN54-201ENST00000333213 IGHV4-28A0A0C4DH34 117 aa16.58■□□□□ 0.25
TSEN54-201ENST00000333213 PCP4P48539 62 aa16.58■□□□□ 0.25
TSEN54-201ENST00000333213 GTF2H5Q6ZYL4 71 aa16.58■□□□□ 0.25
TSEN54-201ENST00000333213 RPL39LQ96EH5 51 aaKnown RBP16.58■□□□□ 0.25
TSEN54-201ENST00000333213 Q6ZSN1 163 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms