RNA–Protein interactions for RNA: ENST00000331462.5

HOXD1-201, Transcript of homeobox D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD1, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD1-201ENST00000331462 VPREB3Q9UKI3 123 aa16.6■□□□□ 0.25
HOXD1-201ENST00000331462 APOMO95445 188 aa16.6■□□□□ 0.25
HOXD1-201ENST00000331462 CFC1BP0CG36 223 aa16.6■□□□□ 0.25
HOXD1-201ENST00000331462 CFC1P0CG37 223 aa16.6■□□□□ 0.25
HOXD1-201ENST00000331462 HOXD3P31249 432 aaPredicted RBP16.6■□□□□ 0.25
HOXD1-201ENST00000331462 SMCPP49901 116 aaPredicted RBP16.6■□□□□ 0.25
HOXD1-201ENST00000331462 C1QTNF4Q9BXJ3 329 aa16.6■□□□□ 0.25
HOXD1-201ENST00000331462 DOPEY1Q5JWR5 2465 aa16.6■□□□□ 0.25
HOXD1-201ENST00000331462 C10orf126Q8N4M7 172 aa16.59■□□□□ 0.25
HOXD1-201ENST00000331462 VPS13CQ709C8 3753 aa16.59■□□□□ 0.25
HOXD1-201ENST00000331462 IGLV4-3A0A075B6K6 122 aa16.58■□□□□ 0.25
HOXD1-201ENST00000331462 ZNF22P17026 224 aaPredicted RBP16.58■□□□□ 0.25
HOXD1-201ENST00000331462 OPRPNQ99935 248 aaPredicted RBP16.58■□□□□ 0.25
HOXD1-201ENST00000331462 PYGO1Q9Y3Y4 419 aa16.58■□□□□ 0.24
HOXD1-201ENST00000331462 TRBV20-1A0A075B6N2 111 aa16.57■□□□□ 0.24
HOXD1-201ENST00000331462 LOC107984156A0A0G2JMH3 177 aa16.57■□□□□ 0.24
HOXD1-201ENST00000331462 RHODO00212 210 aa16.57■□□□□ 0.24
HOXD1-201ENST00000331462 FSHBP01225 129 aa16.57■□□□□ 0.24
HOXD1-201ENST00000331462 AZU1P20160 251 aa16.57■□□□□ 0.24
HOXD1-201ENST00000331462 ARL17AQ8IVW1 177 aa16.57■□□□□ 0.24
HOXD1-201ENST00000331462 ZNF702PQ9H963 129 aa16.57■□□□□ 0.24
HOXD1-201ENST00000331462 RBMY1A1P0DJD3 496 aaKnown RBP16.56■□□□□ 0.24
HOXD1-201ENST00000331462 RBMY1CP0DJD4 496 aa16.56■□□□□ 0.24
HOXD1-201ENST00000331462 CRYBA4P53673 196 aa16.56■□□□□ 0.24
HOXD1-201ENST00000331462 RBMY1FQ15415 496 aaKnown RBP16.56■□□□□ 0.24
HOXD1-201ENST00000331462 PSMB2P49721 201 aa16.55■□□□□ 0.24
HOXD1-201ENST00000331462 FOXI1Q12951 378 aa16.55■□□□□ 0.24
HOXD1-201ENST00000331462 PIK3CD-AS1Q5SR53 167 aa16.55■□□□□ 0.24
HOXD1-201ENST00000331462 GTSF1LQ9H1H1 148 aa16.55■□□□□ 0.24
HOXD1-201ENST00000331462 PRO1854Q9UHT4 67 aa16.55■□□□□ 0.24
HOXD1-201ENST00000331462 INSL3P51460 131 aa16.55■□□□□ 0.24
HOXD1-201ENST00000331462 Q5PR19 223 aa16.55■□□□□ 0.24
HOXD1-201ENST00000331462 SBSPONQ8IVN8 264 aa16.55■□□□□ 0.24
HOXD1-201ENST00000331462 ZFYVE26Q68DK2 2539 aa16.54■□□□□ 0.24
HOXD1-201ENST00000331462 VCX2Q9H322 139 aa16.54■□□□□ 0.24
HOXD1-201ENST00000331462 TRAV2A0A0B4J234 112 aa16.53■□□□□ 0.24
HOXD1-201ENST00000331462 Q6YL49 198 aa16.53■□□□□ 0.24
HOXD1-201ENST00000331462 NRGNQ92686 78 aa16.53■□□□□ 0.24
HOXD1-201ENST00000331462 TCTEX1D4Q5JR98 221 aa16.53■□□□□ 0.24
HOXD1-201ENST00000331462 PTH2Q96A98 100 aa16.53■□□□□ 0.24
HOXD1-201ENST00000331462 SPG11Q96JI7 2443 aa16.52■□□□□ 0.24
HOXD1-201ENST00000331462 BBC3Q96PG8 261 aaPredicted RBP16.52■□□□□ 0.24
HOXD1-201ENST00000331462 DUX5Q96PT3 197 aa16.52■□□□□ 0.24
HOXD1-201ENST00000331462 COL12A1Q99715 3063 aa16.52■□□□□ 0.23
HOXD1-201ENST00000331462 CSPG4Q6UVK1 2322 aa16.52■□□□□ 0.23
HOXD1-201ENST00000331462 A0A0B4J2C4 111 aa16.51■□□□□ 0.23
HOXD1-201ENST00000331462 A0A0J9YXV3 536 aa16.51■□□□□ 0.23
HOXD1-201ENST00000331462 TCL1BO95988 128 aa16.51■□□□□ 0.23
HOXD1-201ENST00000331462 FAM104AQ969W3 186 aa16.51■□□□□ 0.23
HOXD1-201ENST00000331462 CFAP46Q8IYW2 2715 aa16.51■□□□□ 0.23
HOXD1-201ENST00000331462 TGFAP01135 160 aa16.51■□□□□ 0.23
HOXD1-201ENST00000331462 MRPS36P82909 103 aaKnown RBP16.51■□□□□ 0.23
HOXD1-201ENST00000331462 A8MWV9 139 aa16.5■□□□□ 0.23
HOXD1-201ENST00000331462 SFTA2Q6UW10 78 aa16.5■□□□□ 0.23
HOXD1-201ENST00000331462 DOPEY2Q9Y3R5 2298 aa16.49■□□□□ 0.23
HOXD1-201ENST00000331462 A4D1N5 150 aa16.49■□□□□ 0.23
HOXD1-201ENST00000331462 KNCNA6PVL3 124 aa16.49■□□□□ 0.23
HOXD1-201ENST00000331462 H3BMM0 161 aa16.49■□□□□ 0.23
HOXD1-201ENST00000331462 M0R2P5 195 aa16.49■□□□□ 0.23
HOXD1-201ENST00000331462 SMAGPQ0VAQ4 97 aa16.49■□□□□ 0.23
HOXD1-201ENST00000331462 TEN1Q86WV5 123 aa16.49■□□□□ 0.23
HOXD1-201ENST00000331462 TMEM263Q8WUH6 116 aaKnown RBP16.49■□□□□ 0.23
HOXD1-201ENST00000331462 PRB1P04280 392 aa16.48■□□□□ 0.23
HOXD1-201ENST00000331462 ZNF843Q8N446 348 aa16.48■□□□□ 0.23
HOXD1-201ENST00000331462 RBMY1BA6NDE4 496 aaKnown RBP16.47■□□□□ 0.23
HOXD1-201ENST00000331462 RBMY1EA6NEQ0 496 aaKnown RBP16.47■□□□□ 0.23
HOXD1-201ENST00000331462 EIF4EBP3O60516 100 aaPredicted RBP16.47■□□□□ 0.23
HOXD1-201ENST00000331462 RBMY1DP0C7P1 496 aaKnown RBP16.47■□□□□ 0.23
HOXD1-201ENST00000331462 CD28P10747 220 aa16.47■□□□□ 0.23
HOXD1-201ENST00000331462 DEFB131AP59861 70 aa16.47■□□□□ 0.23
HOXD1-201ENST00000331462 IGHV3-33P01772 117 aa16.47■□□□□ 0.23
HOXD1-201ENST00000331462 LINC00467Q9BRT7 94 aa16.47■□□□□ 0.23
HOXD1-201ENST00000331462 CELSR2Q9HCU4 2923 aa16.47■□□□□ 0.23
HOXD1-201ENST00000331462 IGSF10Q6WRI0 2623 aa16.47■□□□□ 0.23
HOXD1-201ENST00000331462 M0QXV9 152 aa16.46■□□□□ 0.23
HOXD1-201ENST00000331462 Q8N2B8 174 aa16.46■□□□□ 0.23
HOXD1-201ENST00000331462 ZNF418Q8TF45 676 aaPredicted RBP16.46■□□□□ 0.23
HOXD1-201ENST00000331462 PPDPFLQ8WWR9 84 aa16.46■□□□□ 0.23
HOXD1-201ENST00000331462 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.46■□□□□ 0.22
HOXD1-201ENST00000331462 A0A0J9YXY3 114 aa16.46■□□□□ 0.22
HOXD1-201ENST00000331462 ZNF415Q09FC8 603 aa16.46■□□□□ 0.22
HOXD1-201ENST00000331462 USP9XQ93008 2570 aaPredicted RBP16.45■□□□□ 0.22
HOXD1-201ENST00000331462 IGHV3-30-3P0DP02 117 aa16.45■□□□□ 0.22
HOXD1-201ENST00000331462 SLURP1P55000 103 aa16.45■□□□□ 0.22
HOXD1-201ENST00000331462 SPANXA1Q9NS26 97 aa16.45■□□□□ 0.22
HOXD1-201ENST00000331462 TNFRSF18Q9Y5U5 241 aa16.45■□□□□ 0.22
HOXD1-201ENST00000331462 MUSTN1Q8IVN3 82 aa16.44■□□□□ 0.22
HOXD1-201ENST00000331462 TIMM21Q9BVV7 248 aa16.44■□□□□ 0.22
HOXD1-201ENST00000331462 KMT2BQ9UMN6 2715 aaPredicted RBP16.44■□□□□ 0.22
HOXD1-201ENST00000331462 PROK1P58294 105 aa16.44■□□□□ 0.22
HOXD1-201ENST00000331462 DUX3Q96PT4 197 aa16.44■□□□□ 0.22
HOXD1-201ENST00000331462 IGHV3-64A0A075B6Q5 118 aa16.43■□□□□ 0.22
HOXD1-201ENST00000331462 LITAFQ99732 161 aa16.43■□□□□ 0.22
HOXD1-201ENST00000331462 CDIP1Q9H305 208 aa16.43■□□□□ 0.22
HOXD1-201ENST00000331462 IGHV4-31P0DP07 118 aa16.42■□□□□ 0.22
HOXD1-201ENST00000331462 CARD19Q96LW7 228 aa16.42■□□□□ 0.22
HOXD1-201ENST00000331462 CHCHD7Q9BUK0 85 aa16.42■□□□□ 0.22
HOXD1-201ENST00000331462 PEMTQ9UBM1 199 aa16.42■□□□□ 0.22
HOXD1-201ENST00000331462 IGHV3-73A0A0B4J1V6 119 aa16.42■□□□□ 0.22
HOXD1-201ENST00000331462 MAPK1IP1LQ8NDC0 245 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms