RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 A0A0J9YXV3 536 aa13.63□□□□□ -0.23
SOCS3-201ENST00000330871 LINC00315P59091 139 aa13.63□□□□□ -0.23
SOCS3-201ENST00000330871 C5orf47Q569G3 176 aa13.63□□□□□ -0.23
SOCS3-201ENST00000330871 LINC00527Q9UJ94 153 aa13.63□□□□□ -0.23
SOCS3-201ENST00000330871 COL12A1Q99715 3063 aa13.62□□□□□ -0.23
SOCS3-201ENST00000330871 VCYO14598 125 aa13.62□□□□□ -0.23
SOCS3-201ENST00000330871 ADAMTSL4-AS1Q5T5F5 129 aa13.62□□□□□ -0.23
SOCS3-201ENST00000330871 COX6CP09669 75 aa13.62□□□□□ -0.23
SOCS3-201ENST00000330871 FAM19A5Q7Z5A7 132 aaPredicted RBP13.62□□□□□ -0.23
SOCS3-201ENST00000330871 SMCR5Q8TEV8 140 aa13.62□□□□□ -0.23
SOCS3-201ENST00000330871 SPXQ9BT56 116 aa13.61□□□□□ -0.23
SOCS3-201ENST00000330871 F6UB75 175 aa13.61□□□□□ -0.23
SOCS3-201ENST00000330871 SMIM9A6NGZ8 99 aa13.6□□□□□ -0.23
SOCS3-201ENST00000330871 PRRC2AP48634 2157 aaKnown RBP13.6□□□□□ -0.23
SOCS3-201ENST00000330871 FAM110DQ8TAY7 271 aaPredicted RBP13.6□□□□□ -0.23
SOCS3-201ENST00000330871 MRPL53Q96EL3 112 aaKnown RBP13.6□□□□□ -0.23
SOCS3-201ENST00000330871 CCDC140Q96MF4 163 aa13.6□□□□□ -0.23
SOCS3-201ENST00000330871 KIF25-AS1Q9Y6Z4 181 aa13.6□□□□□ -0.23
SOCS3-201ENST00000330871 I3L3M4 83 aa13.6□□□□□ -0.23
SOCS3-201ENST00000330871 MINOS1Q5TGZ0 78 aa13.6□□□□□ -0.23
SOCS3-201ENST00000330871 FAM74A4Q5TZK3 123 aa13.6□□□□□ -0.23
SOCS3-201ENST00000330871 Q8N9W7 124 aa13.6□□□□□ -0.23
SOCS3-201ENST00000330871 MINOS1-NBL1R4GNA1 71 aa13.6□□□□□ -0.23
SOCS3-201ENST00000330871 LST1O00453 97 aa13.59□□□□□ -0.23
SOCS3-201ENST00000330871 DEFB121Q5J5C9 76 aa13.59□□□□□ -0.23
SOCS3-201ENST00000330871 DUX5Q96PT3 197 aa13.59□□□□□ -0.23
SOCS3-201ENST00000330871 LITAFQ99732 161 aa13.59□□□□□ -0.23
SOCS3-201ENST00000330871 SPTBN1Q01082 2364 aaKnown RBP13.59□□□□□ -0.23
SOCS3-201ENST00000330871 EDA2RQ9HAV5 297 aa13.58□□□□□ -0.24
SOCS3-201ENST00000330871 IGHV4OR15-8A0A075B7B6 117 aa13.58□□□□□ -0.24
SOCS3-201ENST00000330871 A0A087WW49 117 aa13.58□□□□□ -0.24
SOCS3-201ENST00000330871 IGHV3-30-3P0DP02 117 aa13.58□□□□□ -0.24
SOCS3-201ENST00000330871 IGKV3-7A0A075B6H7 116 aa13.57□□□□□ -0.24
SOCS3-201ENST00000330871 TRAV41A0A0B4J266 112 aa13.57□□□□□ -0.24
SOCS3-201ENST00000330871 UQCRQO14949 82 aa13.57□□□□□ -0.24
SOCS3-201ENST00000330871 LY6DQ14210 128 aa13.57□□□□□ -0.24
SOCS3-201ENST00000330871 A8MZ25 164 aa13.56□□□□□ -0.24
SOCS3-201ENST00000330871 G3V318 75 aa13.56□□□□□ -0.24
SOCS3-201ENST00000330871 KLK9Q2XQG4 91 aa13.56□□□□□ -0.24
SOCS3-201ENST00000330871 KLK9Q9UKQ9 250 aa13.56□□□□□ -0.24
SOCS3-201ENST00000330871 TRAV12-3A0A0B4J271 114 aa13.55□□□□□ -0.24
SOCS3-201ENST00000330871 J3KT08 172 aa13.55□□□□□ -0.24
SOCS3-201ENST00000330871 GRNP28799 593 aaKnown RBP13.55□□□□□ -0.24
SOCS3-201ENST00000330871 ITLN2Q8WWU7 325 aaPredicted RBP13.55□□□□□ -0.24
SOCS3-201ENST00000330871 LINC00477Q96M19 166 aa13.55□□□□□ -0.24
SOCS3-201ENST00000330871 LINC00526Q96FQ7 95 aa13.55□□□□□ -0.24
SOCS3-201ENST00000330871 UBTD1Q9HAC8 227 aa13.55□□□□□ -0.24
SOCS3-201ENST00000330871 DAND5Q8N907 189 aa13.55□□□□□ -0.24
SOCS3-201ENST00000330871 AKAP6Q13023 2319 aa13.54□□□□□ -0.24
SOCS3-201ENST00000330871 ATP6V0E1O15342 81 aa13.54□□□□□ -0.24
SOCS3-201ENST00000330871 LENEPQ9Y5L5 61 aa13.54□□□□□ -0.24
SOCS3-201ENST00000330871 TRBV27A0A0K0K1C4 114 aa13.54□□□□□ -0.24
SOCS3-201ENST00000330871 TIMM21Q9BVV7 248 aa13.54□□□□□ -0.24
SOCS3-201ENST00000330871 IMUPQ9GZP8 106 aa13.54□□□□□ -0.24
SOCS3-201ENST00000330871 A0A0J9YX75 114 aa13.53□□□□□ -0.24
SOCS3-201ENST00000330871 FBXL19-AS1Q494R0 122 aa13.53□□□□□ -0.24
SOCS3-201ENST00000330871 ANKHD1Q8IWZ3 2542 aaKnown RBP13.53□□□□□ -0.24
SOCS3-201ENST00000330871 RNASE13Q5GAN3 156 aaKnown RBP13.52□□□□□ -0.24
SOCS3-201ENST00000330871 C9orf139Q6ZV77 190 aa13.52□□□□□ -0.24
SOCS3-201ENST00000330871 IGHV1-69P01742 117 aa13.52□□□□□ -0.25
SOCS3-201ENST00000330871 RPL11P62913 178 aaKnown RBP13.52□□□□□ -0.25
SOCS3-201ENST00000330871 LRRC75A-AS1Q8N1F1 130 aa13.52□□□□□ -0.25
SOCS3-201ENST00000330871 MED14OSP0DP75 135 aa13.51□□□□□ -0.25
SOCS3-201ENST00000330871 U3KQE9 123 aa13.51□□□□□ -0.25
SOCS3-201ENST00000330871 RIF1Q5UIP0 2472 aaKnown RBP13.51□□□□□ -0.25
SOCS3-201ENST00000330871 TRBV7-1A0A0A6YYK4 115 aa13.51□□□□□ -0.25
SOCS3-201ENST00000330871 NDUFA12Q9UI09 145 aa13.51□□□□□ -0.25
SOCS3-201ENST00000330871 IGLV4-3A0A075B6K6 122 aa13.5□□□□□ -0.25
SOCS3-201ENST00000330871 GAGE2AQ6NT46 116 aa13.5□□□□□ -0.25
SOCS3-201ENST00000330871 TMEM61Q8N0U2 210 aa13.5□□□□□ -0.25
SOCS3-201ENST00000330871 CYSTM1Q9H1C7 97 aa13.5□□□□□ -0.25
SOCS3-201ENST00000330871 ZFP36P26651 326 aaKnown RBP13.5□□□□□ -0.25
SOCS3-201ENST00000330871 LINC00643Q86TS7 51 aa13.5□□□□□ -0.25
SOCS3-201ENST00000330871 hADV29S1A0JD25 119 aa13.49□□□□□ -0.25
SOCS3-201ENST00000330871 MIAQ16674 131 aa13.49□□□□□ -0.25
SOCS3-201ENST00000330871 SPTA1P02549 2419 aa13.49□□□□□ -0.25
SOCS3-201ENST00000330871 NXPH4O95158 308 aa13.49□□□□□ -0.25
SOCS3-201ENST00000330871 RHOHQ15669 191 aa13.49□□□□□ -0.25
SOCS3-201ENST00000330871 COX7CP15954 63 aa13.48□□□□□ -0.25
SOCS3-201ENST00000330871 DCANP1Q8TF63 244 aa13.48□□□□□ -0.25
SOCS3-201ENST00000330871 SIRPDQ9H106 197 aa13.48□□□□□ -0.25
SOCS3-201ENST00000330871 ACYP1P07311 99 aa13.48□□□□□ -0.25
SOCS3-201ENST00000330871 C20orf203Q8NBC4 194 aa13.48□□□□□ -0.25
SOCS3-201ENST00000330871 C11orf71Q6IPW1 123 aa13.48□□□□□ -0.25
SOCS3-201ENST00000330871 SPANXDQ9BXN6 97 aa13.48□□□□□ -0.25
SOCS3-201ENST00000330871 SPANXCQ9NY87 97 aa13.48□□□□□ -0.25
SOCS3-201ENST00000330871 VPS13CQ709C8 3753 aa13.48□□□□□ -0.25
SOCS3-201ENST00000330871 OVOL1O14753 267 aa13.47□□□□□ -0.25
SOCS3-201ENST00000330871 RS1O15537 224 aa13.47□□□□□ -0.25
SOCS3-201ENST00000330871 NSUN5P1Q3KNT7 163 aa13.47□□□□□ -0.25
SOCS3-201ENST00000330871 UNQ9165/PRO28630Q6UXU0 137 aa13.47□□□□□ -0.25
SOCS3-201ENST00000330871 A0A1B0GX51 115 aa13.46□□□□□ -0.26
SOCS3-201ENST00000330871 KIR2DL5BQ8NHK3 375 aa13.46□□□□□ -0.26
SOCS3-201ENST00000330871 C2orf48Q96LS8 159 aa13.46□□□□□ -0.26
SOCS3-201ENST00000330871 ZFHX2Q9C0A1 2572 aaPredicted RBP13.45□□□□□ -0.26
SOCS3-201ENST00000330871 DAZ2Q13117 558 aaKnown RBP13.45□□□□□ -0.26
SOCS3-201ENST00000330871 DAZ4Q86SG3 579 aaKnown RBP13.45□□□□□ -0.26
SOCS3-201ENST00000330871 DAZ1Q9NQZ3 744 aaKnown RBP13.45□□□□□ -0.26
SOCS3-201ENST00000330871 DAZ3Q9NR90 486 aaKnown RBP13.45□□□□□ -0.26
SOCS3-201ENST00000330871 PTPRZ1P23471 2315 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms