RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 SDIM1Q6ZPB5 146 aa8.94□□□□□ -0.98
SHMT2-201ENST00000328923 PRORYQ9H606 182 aa8.94□□□□□ -0.98
SHMT2-201ENST00000328923 LINC01561Q8N1V8 128 aa8.93□□□□□ -0.98
SHMT2-201ENST00000328923 DCANP1Q8TF63 244 aa8.93□□□□□ -0.98
SHMT2-201ENST00000328923 RNF125Q96EQ8 232 aa8.93□□□□□ -0.98
SHMT2-201ENST00000328923 FHL2Q14192 279 aa8.93□□□□□ -0.98
SHMT2-201ENST00000328923 ZNF491Q8N8L2 437 aa8.93□□□□□ -0.98
SHMT2-201ENST00000328923 CDSNQ15517 529 aa8.92□□□□□ -0.98
SHMT2-201ENST00000328923 PRSS2P07478 247 aa8.92□□□□□ -0.98
SHMT2-201ENST00000328923 COX6CP09669 75 aa8.92□□□□□ -0.98
SHMT2-201ENST00000328923 NACAE9PAV3 2078 aa8.91□□□□□ -0.98
SHMT2-201ENST00000328923 TSHBP01222 138 aa8.91□□□□□ -0.98
SHMT2-201ENST00000328923 SYNJ2BPP57105 145 aa8.91□□□□□ -0.98
SHMT2-201ENST00000328923 DEFB104AQ8WTQ1 72 aa8.91□□□□□ -0.98
SHMT2-201ENST00000328923 TIMM21Q9BVV7 248 aa8.91□□□□□ -0.98
SHMT2-201ENST00000328923 IGFL4Q6B9Z1 124 aa8.91□□□□□ -0.98
SHMT2-201ENST00000328923 PCNX1Q96RV3 2341 aa8.91□□□□□ -0.98
SHMT2-201ENST00000328923 IGHV3-64A0A075B6Q5 118 aa8.9□□□□□ -0.98
SHMT2-201ENST00000328923 I3L3M4 83 aa8.9□□□□□ -0.98
SHMT2-201ENST00000328923 K7EIM0 57 aa8.9□□□□□ -0.98
SHMT2-201ENST00000328923 DLX1P56177 255 aa8.9□□□□□ -0.98
SHMT2-201ENST00000328923 Q8NA96 180 aa8.9□□□□□ -0.98
SHMT2-201ENST00000328923 RPL39LQ96EH5 51 aaKnown RBP8.9□□□□□ -0.98
SHMT2-201ENST00000328923 LRBAP50851 2863 aa8.9□□□□□ -0.98
SHMT2-201ENST00000328923 MYO18BQ8IUG5 2567 aa8.9□□□□□ -0.98
SHMT2-201ENST00000328923 A0A087WVE0 104 aa8.9□□□□□ -0.99
SHMT2-201ENST00000328923 NDUFB3O43676 98 aa8.9□□□□□ -0.99
SHMT2-201ENST00000328923 NPC2P61916 151 aa8.9□□□□□ -0.99
SHMT2-201ENST00000328923 SUMO2P61956 95 aaKnown RBP8.9□□□□□ -0.99
SHMT2-201ENST00000328923 RNF5Q99942 180 aa8.9□□□□□ -0.99
SHMT2-201ENST00000328923 PRRC2AP48634 2157 aaKnown RBP8.89□□□□□ -0.99
SHMT2-201ENST00000328923 IGHV1-8P0DP01 117 aa8.89□□□□□ -0.99
SHMT2-201ENST00000328923 FAM223AQ8IWN6 122 aa8.89□□□□□ -0.99
SHMT2-201ENST00000328923 ZNF843Q8N446 348 aa8.89□□□□□ -0.99
SHMT2-201ENST00000328923 NUP37Q8NFH4 326 aa8.89□□□□□ -0.99
SHMT2-201ENST00000328923 IL17DQ8TAD2 202 aa8.89□□□□□ -0.99
SHMT2-201ENST00000328923 C16orf95Q9H693 158 aa8.89□□□□□ -0.99
SHMT2-201ENST00000328923 MAST4O15021 2626 aa8.89□□□□□ -0.99
SHMT2-201ENST00000328923 DCHS2Q6V1P9 2916 aa8.89□□□□□ -0.99
SHMT2-201ENST00000328923 TRAV12-3A0A0B4J271 114 aa8.89□□□□□ -0.99
SHMT2-201ENST00000328923 C9orf139Q6ZV77 190 aa8.89□□□□□ -0.99
SHMT2-201ENST00000328923 C16orf92Q96LL3 132 aa8.89□□□□□ -0.99
SHMT2-201ENST00000328923 IGHV3-72A0A0B4J1Y9 119 aa8.88□□□□□ -0.99
SHMT2-201ENST00000328923 IGKV3D-20A0A0C4DH25 116 aa8.88□□□□□ -0.99
SHMT2-201ENST00000328923 TMEM178BH3BS89 294 aa8.88□□□□□ -0.99
SHMT2-201ENST00000328923 PLA2G2AP14555 144 aa8.88□□□□□ -0.99
SHMT2-201ENST00000328923 LOXP28300 417 aaPredicted RBP8.88□□□□□ -0.99
SHMT2-201ENST00000328923 CIRBPQ14011 172 aaKnown RBP8.88□□□□□ -0.99
SHMT2-201ENST00000328923 PAPPA-AS1Q5QFB9 102 aa8.88□□□□□ -0.99
SHMT2-201ENST00000328923 IGKV3D-7A0A0C4DH55 119 aa8.88□□□□□ -0.99
SHMT2-201ENST00000328923 C22orf34Q6ZV56 151 aa8.88□□□□□ -0.99
SHMT2-201ENST00000328923 PRIMA1Q86XR5 153 aa8.88□□□□□ -0.99
SHMT2-201ENST00000328923 C11orf21Q9P2W6 132 aa8.88□□□□□ -0.99
SHMT2-201ENST00000328923 NAV2Q8IVL1 2488 aa8.88□□□□□ -0.99
SHMT2-201ENST00000328923 SPTA1P02549 2419 aa8.87□□□□□ -0.99
SHMT2-201ENST00000328923 KAAG1Q9UBP8 84 aa8.87□□□□□ -0.99
SHMT2-201ENST00000328923 IGHV1-3A0A0C4DH29 117 aa8.87□□□□□ -0.99
SHMT2-201ENST00000328923 A0A1W2PRX2 142 aa8.87□□□□□ -0.99
SHMT2-201ENST00000328923 DAZ2Q13117 558 aaKnown RBP8.87□□□□□ -0.99
SHMT2-201ENST00000328923 DAZ4Q86SG3 579 aaKnown RBP8.87□□□□□ -0.99
SHMT2-201ENST00000328923 BRK1Q8WUW1 75 aa8.87□□□□□ -0.99
SHMT2-201ENST00000328923 DAZ1Q9NQZ3 744 aaKnown RBP8.87□□□□□ -0.99
SHMT2-201ENST00000328923 DAZ3Q9NR90 486 aaKnown RBP8.87□□□□□ -0.99
SHMT2-201ENST00000328923 HECTD1Q9ULT8 2610 aa8.86□□□□□ -0.99
SHMT2-201ENST00000328923 RNF223E7ERA6 249 aa8.86□□□□□ -0.99
SHMT2-201ENST00000328923 IGLV1-47P01700 117 aa8.86□□□□□ -0.99
SHMT2-201ENST00000328923 SPANXN1Q5VSR9 72 aa8.86□□□□□ -0.99
SHMT2-201ENST00000328923 GFRALQ6UXV0 394 aa8.86□□□□□ -0.99
SHMT2-201ENST00000328923 IGHV7-4-1A0A0J9YVY3 117 aa8.86□□□□□ -0.99
SHMT2-201ENST00000328923 FAM223BA6NKX1 122 aa8.86□□□□□ -0.99
SHMT2-201ENST00000328923 ADARB2-AS1A8MUL3 147 aa8.86□□□□□ -0.99
SHMT2-201ENST00000328923 TIRAPP58753 221 aa8.86□□□□□ -0.99
SHMT2-201ENST00000328923 ZNF580Q9UK33 172 aa8.86□□□□□ -0.99
SHMT2-201ENST00000328923 PKDREJQ9NTG1 2253 aa8.85□□□□□ -0.99
SHMT2-201ENST00000328923 TLN1Q9Y490 2541 aaKnown RBP8.85□□□□□ -0.99
SHMT2-201ENST00000328923 EPM2AB3EWF7 344 aa8.85□□□□□ -0.99
SHMT2-201ENST00000328923 USP17L23D6RBM5 183 aa8.85□□□□□ -0.99
SHMT2-201ENST00000328923 PSMB8P28062 276 aa8.85□□□□□ -0.99
SHMT2-201ENST00000328923 SIRPDQ9H106 197 aa8.85□□□□□ -0.99
SHMT2-201ENST00000328923 TP53TG1Q9Y2A0 90 aa8.85□□□□□ -0.99
SHMT2-201ENST00000328923 TRAV12-2A0A075B6T6 113 aa8.85□□□□□ -0.99
SHMT2-201ENST00000328923 LEPROTO15243 131 aa8.85□□□□□ -0.99
SHMT2-201ENST00000328923 RPL39P62891 51 aaKnown RBP8.85□□□□□ -0.99
SHMT2-201ENST00000328923 TMEM243Q9BU79 118 aa8.85□□□□□ -0.99
SHMT2-201ENST00000328923 A0A0J9YXY3 114 aa8.84□□□□□ -0.99
SHMT2-201ENST00000328923 FP248Q71RG6 208 aaPredicted RBP8.84□□□□□ -0.99
SHMT2-201ENST00000328923 LINC00482Q8N8I6 264 aa8.84□□□□□ -0.99
SHMT2-201ENST00000328923 DYNLRB1Q9NP97 96 aa8.84□□□□□ -0.99
SHMT2-201ENST00000328923 NBASA2RRP1 2371 aa8.84□□□□□ -0.99
SHMT2-201ENST00000328923 COL12A1Q99715 3063 aa8.84□□□□□ -0.99
SHMT2-201ENST00000328923 MALRD1Q5VYJ5 2156 aa8.84□□□□□ -0.99
SHMT2-201ENST00000328923 IGHV3OR16-10A0A075B7F0 116 aa8.84□□□□□ -0.99
SHMT2-201ENST00000328923 IGIPA6NJ69 53 aa8.84□□□□□ -0.99
SHMT2-201ENST00000328923 LYPD2Q6UXB3 125 aa8.84□□□□□ -0.99
SHMT2-201ENST00000328923 ARHGAP32A7KAX9 2087 aa8.83□□□□□ -1
SHMT2-201ENST00000328923 POLEQ07864 2286 aa8.83□□□□□ -1
SHMT2-201ENST00000328923 BUB1B-PAK6H3BSN5 160 aa8.83□□□□□ -1
SHMT2-201ENST00000328923 J3QKU1 62 aa8.83□□□□□ -1
SHMT2-201ENST00000328923 DYNAPQ8N1N2 210 aa8.83□□□□□ -1
SHMT2-201ENST00000328923 SLC50A1Q9BRV3 221 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms