RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 LINC01560Q8TB33 94 aa9.48□□□□□ -0.89
CCDC60-201ENST00000327554 SPANXDQ9BXN6 97 aa9.48□□□□□ -0.89
CCDC60-201ENST00000327554 PPDPFQ9H3Y8 114 aa9.48□□□□□ -0.89
CCDC60-201ENST00000327554 SPANXCQ9NY87 97 aa9.48□□□□□ -0.89
CCDC60-201ENST00000327554 KLLNB2CW77 178 aa9.48□□□□□ -0.89
CCDC60-201ENST00000327554 M0QY20 66 aa9.48□□□□□ -0.89
CCDC60-201ENST00000327554 SVEP1Q4LDE5 3571 aa9.47□□□□□ -0.89
CCDC60-201ENST00000327554 TRGV11A0A075B6L2 103 aa9.47□□□□□ -0.89
CCDC60-201ENST00000327554 PRSS2P07478 247 aa9.47□□□□□ -0.89
CCDC60-201ENST00000327554 COX6CP09669 75 aa9.47□□□□□ -0.89
CCDC60-201ENST00000327554 FAM74A4Q5TZK3 123 aa9.47□□□□□ -0.89
CCDC60-201ENST00000327554 CACNA1HO95180 2353 aa9.47□□□□□ -0.89
CCDC60-201ENST00000327554 I3L3M4 83 aa9.47□□□□□ -0.89
CCDC60-201ENST00000327554 TRBV12-3P01733 135 aa9.47□□□□□ -0.89
CCDC60-201ENST00000327554 ZFP36P26651 326 aaKnown RBP9.47□□□□□ -0.89
CCDC60-201ENST00000327554 SIRPDQ9H106 197 aa9.47□□□□□ -0.89
CCDC60-201ENST00000327554 MED13LQ71F56 2210 aa9.46□□□□□ -0.89
CCDC60-201ENST00000327554 TMEM101Q96IK0 257 aa9.46□□□□□ -0.89
CCDC60-201ENST00000327554 SPXQ9BT56 116 aa9.46□□□□□ -0.89
CCDC60-201ENST00000327554 TIMM21Q9BVV7 248 aa9.46□□□□□ -0.89
CCDC60-201ENST00000327554 TRAV8-3A0A0A6YYJ7 113 aa9.46□□□□□ -0.9
CCDC60-201ENST00000327554 MIAQ16674 131 aa9.46□□□□□ -0.9
CCDC60-201ENST00000327554 FAM104AQ969W3 186 aa9.46□□□□□ -0.9
CCDC60-201ENST00000327554 FAM236AA0A1B0GUQ0 79 aa9.45□□□□□ -0.9
CCDC60-201ENST00000327554 FAM236BA0A1B0GV22 79 aa9.45□□□□□ -0.9
CCDC60-201ENST00000327554 C19orf54Q5BKX5 351 aa9.45□□□□□ -0.9
CCDC60-201ENST00000327554 CEMP1Q6PRD7 247 aaPredicted RBP9.45□□□□□ -0.9
CCDC60-201ENST00000327554 TMEM61Q8N0U2 210 aa9.45□□□□□ -0.9
CCDC60-201ENST00000327554 Q8NA96 180 aa9.45□□□□□ -0.9
CCDC60-201ENST00000327554 LINC00527Q9UJ94 153 aa9.45□□□□□ -0.9
CCDC60-201ENST00000327554 IGKV3-7A0A075B6H7 116 aa9.44□□□□□ -0.9
CCDC60-201ENST00000327554 FAM223BA6NKX1 122 aa9.44□□□□□ -0.9
CCDC60-201ENST00000327554 NDUFA4O00483 81 aa9.44□□□□□ -0.9
CCDC60-201ENST00000327554 RPL11P62913 178 aaKnown RBP9.44□□□□□ -0.9
CCDC60-201ENST00000327554 FAM223AQ8IWN6 122 aa9.44□□□□□ -0.9
CCDC60-201ENST00000327554 C5orf56Q8N8D9 126 aa9.44□□□□□ -0.9
CCDC60-201ENST00000327554 C9orf85Q96MD7 179 aa9.44□□□□□ -0.9
CCDC60-201ENST00000327554 IMUPQ9GZP8 106 aa9.44□□□□□ -0.9
CCDC60-201ENST00000327554 ANKRD11Q6UB99 2663 aaPredicted RBP9.44□□□□□ -0.9
CCDC60-201ENST00000327554 NPC2P61916 151 aa9.44□□□□□ -0.9
CCDC60-201ENST00000327554 MRPS36P82909 103 aaKnown RBP9.44□□□□□ -0.9
CCDC60-201ENST00000327554 LY6DQ14210 128 aa9.44□□□□□ -0.9
CCDC60-201ENST00000327554 YAE1D1Q9NRH1 226 aa9.44□□□□□ -0.9
CCDC60-201ENST00000327554 NDUFA12Q9UI09 145 aa9.44□□□□□ -0.9
CCDC60-201ENST00000327554 RELNP78509 3460 aa9.43□□□□□ -0.9
CCDC60-201ENST00000327554 TRAV12-3A0A0B4J271 114 aa9.43□□□□□ -0.9
CCDC60-201ENST00000327554 GRNP28799 593 aaKnown RBP9.43□□□□□ -0.9
CCDC60-201ENST00000327554 SAA4P35542 130 aa9.43□□□□□ -0.9
CCDC60-201ENST00000327554 HRNRQ86YZ3 2850 aaPredicted RBP9.43□□□□□ -0.9
CCDC60-201ENST00000327554 TRAV41A0A0B4J266 112 aa9.43□□□□□ -0.9
CCDC60-201ENST00000327554 IGHV3-16A0A0C4DH30 117 aa9.43□□□□□ -0.9
CCDC60-201ENST00000327554 IGHV1-58A0A0C4DH39 117 aa9.43□□□□□ -0.9
CCDC60-201ENST00000327554 SMCR5Q8TEV8 140 aa9.43□□□□□ -0.9
CCDC60-201ENST00000327554 ANKHD1Q8IWZ3 2542 aaKnown RBP9.42□□□□□ -0.9
CCDC60-201ENST00000327554 ACYP1P07311 99 aa9.42□□□□□ -0.9
CCDC60-201ENST00000327554 LINC00694P0DN24 101 aa9.42□□□□□ -0.9
CCDC60-201ENST00000327554 ZFHX3Q15911 3703 aa9.42□□□□□ -0.9
CCDC60-201ENST00000327554 AKAP13Q12802 2813 aa9.41□□□□□ -0.9
CCDC60-201ENST00000327554 A8MZ25 164 aa9.41□□□□□ -0.9
CCDC60-201ENST00000327554 DCANP1Q8TF63 244 aa9.41□□□□□ -0.9
CCDC60-201ENST00000327554 BDP1A6H8Y1 2624 aa9.41□□□□□ -0.9
CCDC60-201ENST00000327554 ID1P41134 155 aa9.41□□□□□ -0.9
CCDC60-201ENST00000327554 C3orf22Q8N5N4 141 aa9.41□□□□□ -0.9
CCDC60-201ENST00000327554 NRGNQ92686 78 aa9.41□□□□□ -0.9
CCDC60-201ENST00000327554 VSIG2Q96IQ7 327 aa9.41□□□□□ -0.9
CCDC60-201ENST00000327554 DNAJC30Q96LL9 226 aa9.41□□□□□ -0.9
CCDC60-201ENST00000327554 PYGO1Q9Y3Y4 419 aa9.41□□□□□ -0.9
CCDC60-201ENST00000327554 ACACAQ13085 2346 aa9.4□□□□□ -0.9
CCDC60-201ENST00000327554 CD28P10747 220 aa9.4□□□□□ -0.9
CCDC60-201ENST00000327554 C9orf153Q5TBE3 101 aa9.4□□□□□ -0.9
CCDC60-201ENST00000327554 TMEM219Q86XT9 240 aa9.4□□□□□ -0.9
CCDC60-201ENST00000327554 NDUFA7O95182 113 aa9.4□□□□□ -0.91
CCDC60-201ENST00000327554 C11orf71Q6IPW1 123 aa9.4□□□□□ -0.91
CCDC60-201ENST00000327554 RHPN1-AS1Q9BWJ2 59 aa9.4□□□□□ -0.91
CCDC60-201ENST00000327554 ASH1LQ9NR48 2969 aaKnown RBP9.39□□□□□ -0.91
CCDC60-201ENST00000327554 CITED2Q99967 270 aaPredicted RBP9.39□□□□□ -0.91
CCDC60-201ENST00000327554 RNASE13Q5GAN3 156 aaKnown RBP9.39□□□□□ -0.91
CCDC60-201ENST00000327554 SDIM1Q6ZPB5 146 aa9.39□□□□□ -0.91
CCDC60-201ENST00000327554 LINC00643Q86TS7 51 aa9.38□□□□□ -0.91
CCDC60-201ENST00000327554 DUX5Q96PT3 197 aa9.38□□□□□ -0.91
CCDC60-201ENST00000327554 EP300Q09472 2414 aaPredicted RBP9.38□□□□□ -0.91
CCDC60-201ENST00000327554 OTOGLQ3ZCN5 2332 aa9.38□□□□□ -0.91
CCDC60-201ENST00000327554 UQCRQO14949 82 aa9.38□□□□□ -0.91
CCDC60-201ENST00000327554 TIMM17BO60830 172 aa9.38□□□□□ -0.91
CCDC60-201ENST00000327554 DAND5Q8N907 189 aa9.38□□□□□ -0.91
CCDC60-201ENST00000327554 LINC00526Q96FQ7 95 aa9.38□□□□□ -0.91
CCDC60-201ENST00000327554 CSDC2Q9Y534 153 aaKnown RBP9.38□□□□□ -0.91
CCDC60-201ENST00000327554 IGHV3-11P01762 117 aa9.37□□□□□ -0.91
CCDC60-201ENST00000327554 EDN2P20800 178 aa9.37□□□□□ -0.91
CCDC60-201ENST00000327554 TINCRA0A1B0GVN0 87 aa9.37□□□□□ -0.91
CCDC60-201ENST00000327554 HERVK_113P63121 156 aa9.37□□□□□ -0.91
CCDC60-201ENST00000327554 TRAV12-2A0A075B6T6 113 aa9.36□□□□□ -0.91
CCDC60-201ENST00000327554 MOB4Q9Y3A3 225 aa9.36□□□□□ -0.91
CCDC60-201ENST00000327554 LOC107984640A0A0U1RRK4 108 aa9.36□□□□□ -0.91
CCDC60-201ENST00000327554 NPFFO15130 113 aa9.36□□□□□ -0.91
CCDC60-201ENST00000327554 KLK5Q9Y337 293 aaPredicted RBP9.36□□□□□ -0.91
CCDC60-201ENST00000327554 COX7A2LO14548 114 aa9.35□□□□□ -0.91
CCDC60-201ENST00000327554 IGHG2P01859 326 aa9.34□□□□□ -0.91
CCDC60-201ENST00000327554 ATP5G1P05496 136 aa9.34□□□□□ -0.91
CCDC60-201ENST00000327554 C5orf38Q86SI9 138 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms