RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 A0A0J9YY99 117 aa10.75□□□□□ -0.69
PRPF3-201ENST00000324862 RHODO00212 210 aa10.75□□□□□ -0.69
PRPF3-201ENST00000324862 C18orf32Q8TCD1 76 aa10.75□□□□□ -0.69
PRPF3-201ENST00000324862 F5H768 121 aa10.74□□□□□ -0.69
PRPF3-201ENST00000324862 MRAP2Q96G30 205 aa10.74□□□□□ -0.69
PRPF3-201ENST00000324862 HHLA3Q9XRX5 114 aa10.74□□□□□ -0.69
PRPF3-201ENST00000324862 ATP5G1P05496 136 aa10.73□□□□□ -0.69
PRPF3-201ENST00000324862 OR10J3Q5JRS4 329 aa10.73□□□□□ -0.69
PRPF3-201ENST00000324862 NEXN-AS1Q8NBZ9 246 aa10.73□□□□□ -0.69
PRPF3-201ENST00000324862 TRAV26-1A0A087WT03 109 aa10.72□□□□□ -0.69
PRPF3-201ENST00000324862 GAGE12JA6NER3 117 aa10.72□□□□□ -0.69
PRPF3-201ENST00000324862 K7EQD1 137 aa10.72□□□□□ -0.69
PRPF3-201ENST00000324862 NUPR1O60356 82 aa10.72□□□□□ -0.69
PRPF3-201ENST00000324862 PPBPP02775 128 aa10.72□□□□□ -0.69
PRPF3-201ENST00000324862 IFI27P40305 119 aaPredicted RBP10.72□□□□□ -0.69
PRPF3-201ENST00000324862 RAB5BP61020 215 aa10.72□□□□□ -0.69
PRPF3-201ENST00000324862 GAGE1Q13065 139 aa10.72□□□□□ -0.69
PRPF3-201ENST00000324862 GAGE4Q13068 117 aa10.72□□□□□ -0.69
PRPF3-201ENST00000324862 GAGE5Q13069 117 aa10.72□□□□□ -0.69
PRPF3-201ENST00000324862 GAGE13Q4V321 117 aa10.72□□□□□ -0.69
PRPF3-201ENST00000324862 URB1-AS1Q96HZ7 61 aa10.72□□□□□ -0.69
PRPF3-201ENST00000324862 VSIG2Q96IQ7 327 aa10.72□□□□□ -0.69
PRPF3-201ENST00000324862 EDA2RQ9HAV5 297 aa10.72□□□□□ -0.69
PRPF3-201ENST00000324862 DNAH7Q8WXX0 4024 aa10.71□□□□□ -0.69
PRPF3-201ENST00000324862 IGHV3-38A0A0C4DH36 116 aa10.71□□□□□ -0.69
PRPF3-201ENST00000324862 NDUFA6P56556 154 aa10.71□□□□□ -0.69
PRPF3-201ENST00000324862 LINC00310P59036 64 aa10.71□□□□□ -0.69
PRPF3-201ENST00000324862 A0A096LPF7 62 aa10.7□□□□□ -0.7
PRPF3-201ENST00000324862 NHLRC4P0CG21 123 aaPredicted RBP10.7□□□□□ -0.7
PRPF3-201ENST00000324862 CRYBA4P53673 196 aa10.7□□□□□ -0.7
PRPF3-201ENST00000324862 ZNRF2Q8NHG8 242 aa10.7□□□□□ -0.7
PRPF3-201ENST00000324862 PHLDA1Q8WV24 401 aaPredicted RBP10.7□□□□□ -0.7
PRPF3-201ENST00000324862 LYSTQ99698 3801 aa10.7□□□□□ -0.7
PRPF3-201ENST00000324862 NIT2Q9NQR4 276 aa10.7□□□□□ -0.7
PRPF3-201ENST00000324862 SUMO2P61956 95 aaKnown RBP10.7□□□□□ -0.7
PRPF3-201ENST00000324862 TEX48A0A1B0GUV7 120 aa10.69□□□□□ -0.7
PRPF3-201ENST00000324862 SDHAF1A6NFY7 115 aa10.69□□□□□ -0.7
PRPF3-201ENST00000324862 TRBV6-4A0A1B0GX49 114 aa10.69□□□□□ -0.7
PRPF3-201ENST00000324862 TMEM70Q9BUB7 260 aa10.69□□□□□ -0.7
PRPF3-201ENST00000324862 PRO0255Q9UI72 69 aa10.69□□□□□ -0.7
PRPF3-201ENST00000324862 STARD9Q9P2P6 4700 aa10.68□□□□□ -0.7
PRPF3-201ENST00000324862 TCAPO15273 167 aa10.68□□□□□ -0.7
PRPF3-201ENST00000324862 GYPEP15421 78 aa10.68□□□□□ -0.7
PRPF3-201ENST00000324862 BAGE3Q86Y29 109 aa10.68□□□□□ -0.7
PRPF3-201ENST00000324862 ST20Q9HBF5 79 aa10.68□□□□□ -0.7
PRPF3-201ENST00000324862 DEFB131BA0A096LNP1 70 aa10.68□□□□□ -0.7
PRPF3-201ENST00000324862 PAX4O43316 350 aa10.68□□□□□ -0.7
PRPF3-201ENST00000324862 SERF1AO75920 110 aa10.68□□□□□ -0.7
PRPF3-201ENST00000324862 PMCHL1Q16048 86 aa10.68□□□□□ -0.7
PRPF3-201ENST00000324862 PDZD11Q5EBL8 140 aa10.68□□□□□ -0.7
PRPF3-201ENST00000324862 NIT1Q86X76 327 aa10.68□□□□□ -0.7
PRPF3-201ENST00000324862 IGLV2-18A0A075B6J9 118 aa10.67□□□□□ -0.7
PRPF3-201ENST00000324862 H7C1H1 209 aa10.67□□□□□ -0.7
PRPF3-201ENST00000324862 RHOHQ15669 191 aa10.67□□□□□ -0.7
PRPF3-201ENST00000324862 MAP1LC3AQ9H492 121 aa10.67□□□□□ -0.7
PRPF3-201ENST00000324862 TNFRSF18Q9Y5U5 241 aa10.67□□□□□ -0.7
PRPF3-201ENST00000324862 POLR2KP53803 58 aaKnown RBP10.67□□□□□ -0.7
PRPF3-201ENST00000324862 Q0VG73 95 aa10.67□□□□□ -0.7
PRPF3-201ENST00000324862 RNASEKQ6P5S7 137 aaKnown RBP10.67□□□□□ -0.7
PRPF3-201ENST00000324862 PRSS3P2Q8NHM4 247 aa10.67□□□□□ -0.7
PRPF3-201ENST00000324862 TRBV7-3A0A075B6L6 115 aa10.66□□□□□ -0.7
PRPF3-201ENST00000324862 SMIM2Q9BVW6 85 aa10.66□□□□□ -0.7
PRPF3-201ENST00000324862 LAMTOR2Q9Y2Q5 125 aa10.66□□□□□ -0.7
PRPF3-201ENST00000324862 PLECQ15149 4684 aaKnown RBP10.66□□□□□ -0.7
PRPF3-201ENST00000324862 TRBV6-5A0A0K0K1A5 114 aa10.65□□□□□ -0.7
PRPF3-201ENST00000324862 CIDEAO60543 219 aa10.65□□□□□ -0.7
PRPF3-201ENST00000324862 SNRPEP62304 92 aaKnown RBP10.65□□□□□ -0.7
PRPF3-201ENST00000324862 PRADC1Q9BSG0 188 aa10.65□□□□□ -0.7
PRPF3-201ENST00000324862 FAM19A2Q8N3H0 131 aa10.65□□□□□ -0.71
PRPF3-201ENST00000324862 C20orf78Q9BR46 151 aa10.65□□□□□ -0.71
PRPF3-201ENST00000324862 TRBV10-1A0A0K0K1A3 114 aa10.64□□□□□ -0.71
PRPF3-201ENST00000324862 LINC00614P0C842 121 aa10.64□□□□□ -0.71
PRPF3-201ENST00000324862 UBE2D3P61077 147 aa10.64□□□□□ -0.71
PRPF3-201ENST00000324862 UBE2D2P62837 147 aa10.64□□□□□ -0.71
PRPF3-201ENST00000324862 RPL36AP83881 106 aaKnown RBP10.64□□□□□ -0.71
PRPF3-201ENST00000324862 RPL36ALQ969Q0 106 aaKnown RBP10.64□□□□□ -0.71
PRPF3-201ENST00000324862 S100A6P06703 90 aa10.63□□□□□ -0.71
PRPF3-201ENST00000324862 Q8N8P6 123 aa10.63□□□□□ -0.71
PRPF3-201ENST00000324862 DYNC2H1Q8NCM8 4307 aaKnown RBP10.63□□□□□ -0.71
PRPF3-201ENST00000324862 TRBV27A0A0K0K1C4 114 aa10.63□□□□□ -0.71
PRPF3-201ENST00000324862 PRSS47A8MTI9 375 aa10.63□□□□□ -0.71
PRPF3-201ENST00000324862 PPP1R17O96001 155 aa10.63□□□□□ -0.71
PRPF3-201ENST00000324862 LINC00694P0DN24 101 aa10.63□□□□□ -0.71
PRPF3-201ENST00000324862 PMCHP20382 165 aa10.62□□□□□ -0.71
PRPF3-201ENST00000324862 FA2HQ7L5A8 372 aa10.62□□□□□ -0.71
PRPF3-201ENST00000324862 TRAV10A0A0B4J240 114 aa10.62□□□□□ -0.71
PRPF3-201ENST00000324862 TSHBP01222 138 aa10.62□□□□□ -0.71
PRPF3-201ENST00000324862 DNAJC30Q96LL9 226 aa10.62□□□□□ -0.71
PRPF3-201ENST00000324862 TENM2Q9NT68 2774 aa10.61□□□□□ -0.71
PRPF3-201ENST00000324862 VCYO14598 125 aa10.61□□□□□ -0.71
PRPF3-201ENST00000324862 NUDT3O95989 172 aa10.61□□□□□ -0.71
PRPF3-201ENST00000324862 NTM-AS1Q6ZSK4 140 aa10.61□□□□□ -0.71
PRPF3-201ENST00000324862 AP5S1Q9NUS5 200 aa10.61□□□□□ -0.71
PRPF3-201ENST00000324862 I3L3M4 83 aa10.6□□□□□ -0.71
PRPF3-201ENST00000324862 COA6Q5JTJ3 125 aaKnown RBP10.6□□□□□ -0.71
PRPF3-201ENST00000324862 NXT2Q9NPJ8 142 aaKnown RBP10.6□□□□□ -0.71
PRPF3-201ENST00000324862 A0A096LNJ9 63 aa10.6□□□□□ -0.71
PRPF3-201ENST00000324862 IGLL5B9A064 214 aa10.6□□□□□ -0.71
PRPF3-201ENST00000324862 C5orf52A6NGY3 159 aa10.59□□□□□ -0.71
PRPF3-201ENST00000324862 IGHV1-24A0A0C4DH33 117 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms