RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 NUP35Q8NFH5 326 aa11.25□□□□□ -0.61
LRRC42-201ENST00000319223 DNAH17Q9UFH2 4485 aa11.25□□□□□ -0.61
LRRC42-201ENST00000319223 FAT2Q9NYQ8 4349 aa11.24□□□□□ -0.61
LRRC42-201ENST00000319223 TRAV26-2A0A0B4J265 109 aa11.23□□□□□ -0.61
LRRC42-201ENST00000319223 A0A1B0GUT8 65 aa11.23□□□□□ -0.61
LRRC42-201ENST00000319223 IGHV3-30P01768 117 aa11.23□□□□□ -0.61
LRRC42-201ENST00000319223 IGHV3-33P01772 117 aa11.23□□□□□ -0.61
LRRC42-201ENST00000319223 IGHV3-30-3P0DP02 117 aa11.23□□□□□ -0.61
LRRC42-201ENST00000319223 IGHV3-30-5P0DP03 117 aa11.23□□□□□ -0.61
LRRC42-201ENST00000319223 TNP2Q05952 138 aa11.23□□□□□ -0.61
LRRC42-201ENST00000319223 LINC01556Q5JQF7 62 aa11.23□□□□□ -0.61
LRRC42-201ENST00000319223 SMIM27A0A1W2PRY6 76 aa11.22□□□□□ -0.61
LRRC42-201ENST00000319223 RASL11AQ6T310 242 aa11.22□□□□□ -0.61
LRRC42-201ENST00000319223 GATD1Q8NB37 220 aa11.22□□□□□ -0.61
LRRC42-201ENST00000319223 BORCS7Q96B45 105 aa11.22□□□□□ -0.61
LRRC42-201ENST00000319223 A0A087WWC5 75 aa11.21□□□□□ -0.61
LRRC42-201ENST00000319223 A0A1B0GVY2 172 aa11.21□□□□□ -0.61
LRRC42-201ENST00000319223 ADCYAP1P18509 176 aa11.21□□□□□ -0.61
LRRC42-201ENST00000319223 Q6ZRN7 208 aaPredicted RBP11.21□□□□□ -0.61
LRRC42-201ENST00000319223 NTM-AS1Q6ZSK4 140 aa11.21□□□□□ -0.61
LRRC42-201ENST00000319223 NAT8BQ9UHF3 227 aa11.21□□□□□ -0.61
LRRC42-201ENST00000319223 TRAV9-2A0A087WT02 112 aa11.21□□□□□ -0.62
LRRC42-201ENST00000319223 H7C1H1 209 aa11.21□□□□□ -0.62
LRRC42-201ENST00000319223 GAS8-AS1O95177 125 aa11.2□□□□□ -0.62
LRRC42-201ENST00000319223 UQCC3Q6UW78 93 aa11.2□□□□□ -0.62
LRRC42-201ENST00000319223 SMIM15Q7Z3B0 74 aa11.2□□□□□ -0.62
LRRC42-201ENST00000319223 COMMD7Q86VX2 200 aa11.2□□□□□ -0.62
LRRC42-201ENST00000319223 DEFB104AQ8WTQ1 72 aa11.2□□□□□ -0.62
LRRC42-201ENST00000319223 DNAJC30Q96LL9 226 aa11.2□□□□□ -0.62
LRRC42-201ENST00000319223 NIT2Q9NQR4 276 aa11.2□□□□□ -0.62
LRRC42-201ENST00000319223 TRBV6-8A0A0A6YYG3 113 aa11.19□□□□□ -0.62
LRRC42-201ENST00000319223 TMEM218A2RU14 115 aa11.19□□□□□ -0.62
LRRC42-201ENST00000319223 RNF185Q96GF1 192 aa11.19□□□□□ -0.62
LRRC42-201ENST00000319223 RIGQ13278 110 aa11.18□□□□□ -0.62
LRRC42-201ENST00000319223 DAZ4Q86SG3 579 aaKnown RBP11.18□□□□□ -0.62
LRRC42-201ENST00000319223 NIT1Q86X76 327 aa11.18□□□□□ -0.62
LRRC42-201ENST00000319223 RPL39LQ96EH5 51 aaKnown RBP11.18□□□□□ -0.62
LRRC42-201ENST00000319223 TMEM191AQ9H0A3 160 aa11.18□□□□□ -0.62
LRRC42-201ENST00000319223 DAZ3Q9NR90 486 aaKnown RBP11.18□□□□□ -0.62
LRRC42-201ENST00000319223 K7EP13 123 aa11.18□□□□□ -0.62
LRRC42-201ENST00000319223 PNRC1Q12796 327 aaPredicted RBP11.18□□□□□ -0.62
LRRC42-201ENST00000319223 LINC00862A6NCI5 91 aa11.17□□□□□ -0.62
LRRC42-201ENST00000319223 IBA57-AS1B1ANH7 110 aa11.17□□□□□ -0.62
LRRC42-201ENST00000319223 BTF3P20290 206 aaKnown RBP11.17□□□□□ -0.62
LRRC42-201ENST00000319223 RAB4AP20338 218 aa11.17□□□□□ -0.62
LRRC42-201ENST00000319223 AMN1Q8IY45 258 aa11.17□□□□□ -0.62
LRRC42-201ENST00000319223 HECTD4Q9Y4D8 3996 aa11.16□□□□□ -0.62
LRRC42-201ENST00000319223 C10orf126Q8N4M7 172 aa11.16□□□□□ -0.62
LRRC42-201ENST00000319223 F8W036 122 aa11.15□□□□□ -0.62
LRRC42-201ENST00000319223 PKD1P98161 4303 aa11.15□□□□□ -0.62
LRRC42-201ENST00000319223 PPP1R2P9O14990 202 aa11.15□□□□□ -0.63
LRRC42-201ENST00000319223 CAMPP49913 170 aa11.15□□□□□ -0.63
LRRC42-201ENST00000319223 MRPL54Q6P161 138 aaKnown RBP11.15□□□□□ -0.63
LRRC42-201ENST00000319223 RPS10P46783 165 aaKnown RBP11.14□□□□□ -0.63
LRRC42-201ENST00000319223 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.14□□□□□ -0.63
LRRC42-201ENST00000319223 Q9HAA7 133 aa11.14□□□□□ -0.63
LRRC42-201ENST00000319223 SMKR1H3BMG3 65 aa11.13□□□□□ -0.63
LRRC42-201ENST00000319223 MT-ND4LP03901 98 aa11.13□□□□□ -0.63
LRRC42-201ENST00000319223 FRZBQ92765 325 aa11.13□□□□□ -0.63
LRRC42-201ENST00000319223 ANAPC16Q96DE5 110 aa11.13□□□□□ -0.63
LRRC42-201ENST00000319223 CHCHD5Q9BSY4 110 aa11.13□□□□□ -0.63
LRRC42-201ENST00000319223 A0A1B0GXF2 115 aa11.12□□□□□ -0.63
LRRC42-201ENST00000319223 TMEM262E9PQX1 116 aa11.12□□□□□ -0.63
LRRC42-201ENST00000319223 IQCJQ1A5X6 159 aa11.12□□□□□ -0.63
LRRC42-201ENST00000319223 NFE4Q86UQ8 179 aa11.12□□□□□ -0.63
LRRC42-201ENST00000319223 SEC11CQ9BY50 192 aa11.12□□□□□ -0.63
LRRC42-201ENST00000319223 URGCP-MRPS24S4R325 110 aa11.12□□□□□ -0.63
LRRC42-201ENST00000319223 BIRC6Q9NR09 4857 aa11.12□□□□□ -0.63
LRRC42-201ENST00000319223 NCR2O95944 276 aa11.12□□□□□ -0.63
LRRC42-201ENST00000319223 MPV17L2Q567V2 206 aa11.12□□□□□ -0.63
LRRC42-201ENST00000319223 TMEM97Q5BJF2 176 aa11.12□□□□□ -0.63
LRRC42-201ENST00000319223 KLK12Q9UKR0 248 aa11.12□□□□□ -0.63
LRRC42-201ENST00000319223 TRBV25-1A0A075B6N4 114 aa11.11□□□□□ -0.63
LRRC42-201ENST00000319223 A0A087WX48 190 aa11.11□□□□□ -0.63
LRRC42-201ENST00000319223 IGHV1-24A0A0C4DH33 117 aa11.11□□□□□ -0.63
LRRC42-201ENST00000319223 GAGE6Q13070 117 aa11.11□□□□□ -0.63
LRRC42-201ENST00000319223 MRPL51Q4U2R6 128 aaKnown RBP11.11□□□□□ -0.63
LRRC42-201ENST00000319223 FAM104BQ5XKR9 115 aa11.11□□□□□ -0.63
LRRC42-201ENST00000319223 TRBV6-5A0A0K0K1A5 114 aa11.1□□□□□ -0.63
LRRC42-201ENST00000319223 SDHAF1A6NFY7 115 aa11.1□□□□□ -0.63
LRRC42-201ENST00000319223 HBBP68871 147 aa11.1□□□□□ -0.63
LRRC42-201ENST00000319223 ATRAIDQ6UW56 229 aa11.1□□□□□ -0.63
LRRC42-201ENST00000319223 Q8N976 141 aa11.1□□□□□ -0.63
LRRC42-201ENST00000319223 MRAP2Q96G30 205 aa11.1□□□□□ -0.63
LRRC42-201ENST00000319223 LAGE3Q14657 143 aa11.09□□□□□ -0.63
LRRC42-201ENST00000319223 KCNIP4Q6PIL6 250 aa11.09□□□□□ -0.63
LRRC42-201ENST00000319223 CHCHD7Q9BUK0 85 aa11.09□□□□□ -0.63
LRRC42-201ENST00000319223 DNAH11Q96DT5 4516 aa11.09□□□□□ -0.63
LRRC42-201ENST00000319223 A0A1B0GW15 77 aa11.09□□□□□ -0.63
LRRC42-201ENST00000319223 COTL1Q14019 142 aa11.09□□□□□ -0.63
LRRC42-201ENST00000319223 C10orf91Q5T1B1 145 aa11.09□□□□□ -0.63
LRRC42-201ENST00000319223 NRACQ8N912 160 aa11.09□□□□□ -0.63
LRRC42-201ENST00000319223 TMEM243Q9BU79 118 aa11.08□□□□□ -0.64
LRRC42-201ENST00000319223 TMEM70Q9BUB7 260 aa11.08□□□□□ -0.64
LRRC42-201ENST00000319223 PKHD1P08F94 4074 aa11.08□□□□□ -0.64
LRRC42-201ENST00000319223 AMTP48728 403 aa11.07□□□□□ -0.64
LRRC42-201ENST00000319223 KRTAP10-2P60368 255 aa11.07□□□□□ -0.64
LRRC42-201ENST00000319223 RBX1P62877 108 aa11.07□□□□□ -0.64
LRRC42-201ENST00000319223 ST20Q9HBF5 79 aa11.07□□□□□ -0.64
LRRC42-201ENST00000319223 A0A087WTM6 91 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms