RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 LAGE3Q14657 143 aa7.13□□□□□ -1.27
CAPN3-201ENST00000318023 C17orf58Q2M2W7 97 aa7.13□□□□□ -1.27
CAPN3-201ENST00000318023 Q8N8P6 123 aa7.13□□□□□ -1.27
CAPN3-201ENST00000318023 PRR25Q96S07 402 aa7.13□□□□□ -1.27
CAPN3-201ENST00000318023 ORM1P02763 201 aa7.12□□□□□ -1.27
CAPN3-201ENST00000318023 ATP5IP56385 69 aaPredicted RBP7.12□□□□□ -1.27
CAPN3-201ENST00000318023 DYNAPQ8N1N2 210 aa7.12□□□□□ -1.27
CAPN3-201ENST00000318023 C3orf22Q8N5N4 141 aa7.12□□□□□ -1.27
CAPN3-201ENST00000318023 OR13C6PQ8NH95 151 aa7.12□□□□□ -1.27
CAPN3-201ENST00000318023 IGLV2-18A0A075B6J9 118 aa7.12□□□□□ -1.27
CAPN3-201ENST00000318023 M0R2P5 195 aa7.12□□□□□ -1.27
CAPN3-201ENST00000318023 TRGV3P03979 118 aa7.12□□□□□ -1.27
CAPN3-201ENST00000318023 ZNF80P51504 273 aaPredicted RBP7.12□□□□□ -1.27
CAPN3-201ENST00000318023 C4orf26Q17RF5 130 aa7.12□□□□□ -1.27
CAPN3-201ENST00000318023 LINC01620Q4KN68 170 aa7.12□□□□□ -1.27
CAPN3-201ENST00000318023 SIGLEC15Q6ZMC9 328 aa7.12□□□□□ -1.27
CAPN3-201ENST00000318023 LINC00527Q9UJ94 153 aa7.12□□□□□ -1.27
CAPN3-201ENST00000318023 TRBV19A0A075B6N1 114 aa7.12□□□□□ -1.27
CAPN3-201ENST00000318023 LINC01546A6NGU7 62 aa7.12□□□□□ -1.27
CAPN3-201ENST00000318023 SUB1P53999 127 aaKnown RBP eCLIP7.12□□□□□ -1.27
CAPN3-201ENST00000318023 HERVK_113P61574 105 aa7.12□□□□□ -1.27
CAPN3-201ENST00000318023 HRCT1Q6UXD1 115 aa7.12□□□□□ -1.27
CAPN3-201ENST00000318023 A0A0J9YY99 117 aa7.11□□□□□ -1.27
CAPN3-201ENST00000318023 IGHV1-8P0DP01 117 aa7.11□□□□□ -1.27
CAPN3-201ENST00000318023 HILS1P60008 231 aa7.11□□□□□ -1.27
CAPN3-201ENST00000318023 DEFB104AQ8WTQ1 72 aa7.11□□□□□ -1.27
CAPN3-201ENST00000318023 EIF4EBP3O60516 100 aaPredicted RBP7.11□□□□□ -1.27
CAPN3-201ENST00000318023 HLA-DMBP28068 263 aa7.11□□□□□ -1.27
CAPN3-201ENST00000318023 LY6G5BQ8NDX9 201 aa7.11□□□□□ -1.27
CAPN3-201ENST00000318023 IGHV3-30P01768 117 aa7.1□□□□□ -1.27
CAPN3-201ENST00000318023 IGHV3-30-5P0DP03 117 aa7.1□□□□□ -1.27
CAPN3-201ENST00000318023 OR4C13Q8NGP0 309 aa7.1□□□□□ -1.27
CAPN3-201ENST00000318023 KIR2DL5BQ8NHK3 375 aa7.1□□□□□ -1.27
CAPN3-201ENST00000318023 SCGB3A1Q96QR1 104 aa7.1□□□□□ -1.27
CAPN3-201ENST00000318023 LINC01559Q495D7 138 aa7.1□□□□□ -1.27
CAPN3-201ENST00000318023 TRAV41A0A0B4J266 112 aa7.1□□□□□ -1.27
CAPN3-201ENST00000318023 IGFL4Q6B9Z1 124 aa7.1□□□□□ -1.27
CAPN3-201ENST00000318023 C2orf82Q6UX34 121 aa7.1□□□□□ -1.27
CAPN3-201ENST00000318023 C14orf178Q8N769 122 aaPredicted RBP7.1□□□□□ -1.27
CAPN3-201ENST00000318023 CYSTM1Q9H1C7 97 aa7.1□□□□□ -1.27
CAPN3-201ENST00000318023 POM121L12Q8N7R1 296 aa7.09□□□□□ -1.27
CAPN3-201ENST00000318023 TRBV6-1A0A0K0K1D8 114 aa7.09□□□□□ -1.27
CAPN3-201ENST00000318023 RPL13AP40429 203 aaKnown RBP7.09□□□□□ -1.27
CAPN3-201ENST00000318023 ZNF575Q86XF7 245 aa7.09□□□□□ -1.27
CAPN3-201ENST00000318023 UQCRQO14949 82 aa7.08□□□□□ -1.28
CAPN3-201ENST00000318023 FSHBP01225 129 aa7.08□□□□□ -1.28
CAPN3-201ENST00000318023 IGHV3-33P01772 117 aa7.08□□□□□ -1.28
CAPN3-201ENST00000318023 UBE2E1P51965 193 aa7.08□□□□□ -1.28
CAPN3-201ENST00000318023 TSPEAR-AS2P59090 65 aa7.08□□□□□ -1.28
CAPN3-201ENST00000318023 ATXN8Q156A1 80 aa7.08□□□□□ -1.28
CAPN3-201ENST00000318023 GAGE2AQ6NT46 116 aa7.08□□□□□ -1.28
CAPN3-201ENST00000318023 TRBV7-7A0A0K0K1E9 115 aa7.08□□□□□ -1.28
CAPN3-201ENST00000318023 EEF1AKMT3Q96AZ1 226 aa7.08□□□□□ -1.28
CAPN3-201ENST00000318023 hADV29S1A0JD25 119 aa7.08□□□□□ -1.28
CAPN3-201ENST00000318023 TMEM170BQ5T4T1 132 aa7.08□□□□□ -1.28
CAPN3-201ENST00000318023 NEXN-AS1Q8NBZ9 246 aa7.08□□□□□ -1.28
CAPN3-201ENST00000318023 TRBV10-2A0A0K0K1G8 114 aa7.07□□□□□ -1.28
CAPN3-201ENST00000318023 A0A1B0GX51 115 aa7.07□□□□□ -1.28
CAPN3-201ENST00000318023 M0R1W7 72 aa7.07□□□□□ -1.28
CAPN3-201ENST00000318023 SPRY2O43597 315 aa7.07□□□□□ -1.28
CAPN3-201ENST00000318023 CGB3P0DN86 165 aa7.07□□□□□ -1.28
CAPN3-201ENST00000318023 CGB7P0DN87 165 aa7.07□□□□□ -1.28
CAPN3-201ENST00000318023 BLCAPP62952 87 aa7.07□□□□□ -1.28
CAPN3-201ENST00000318023 NRACQ8N912 160 aa7.07□□□□□ -1.28
CAPN3-201ENST00000318023 TMEM14CQ9P0S9 112 aa7.07□□□□□ -1.28
CAPN3-201ENST00000318023 TRAV12-1A0A0B4J245 112 aa7.07□□□□□ -1.28
CAPN3-201ENST00000318023 OXTP01178 125 aa7.07□□□□□ -1.28
CAPN3-201ENST00000318023 DLX6P56179 175 aa7.07□□□□□ -1.28
CAPN3-201ENST00000318023 EBI3Q14213 229 aa7.07□□□□□ -1.28
CAPN3-201ENST00000318023 Q6YL49 198 aa7.07□□□□□ -1.28
CAPN3-201ENST00000318023 LINC00526Q96FQ7 95 aa7.07□□□□□ -1.28
CAPN3-201ENST00000318023 DSCR8Q96T75 97 aa7.07□□□□□ -1.28
CAPN3-201ENST00000318023 S4R3C0 116 aa7.07□□□□□ -1.28
CAPN3-201ENST00000318023 A0A1W2PRX2 142 aa7.06□□□□□ -1.28
CAPN3-201ENST00000318023 C11orf86A6NJI1 115 aa7.06□□□□□ -1.28
CAPN3-201ENST00000318023 KHDC1LQ5JSQ8 128 aa7.06□□□□□ -1.28
CAPN3-201ENST00000318023 ZNF256Q9Y2P7 627 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-201ENST00000318023 H7C423 109 aa7.06□□□□□ -1.28
CAPN3-201ENST00000318023 TRIAP1O43715 76 aa7.06□□□□□ -1.28
CAPN3-201ENST00000318023 TMEM167AQ8TBQ9 72 aa7.05□□□□□ -1.28
CAPN3-201ENST00000318023 TMEM263Q8WUH6 116 aaKnown RBP7.05□□□□□ -1.28
CAPN3-201ENST00000318023 SLC25A29Q8N8R3 303 aa7.05□□□□□ -1.28
CAPN3-201ENST00000318023 CLEC2BQ92478 149 aa7.05□□□□□ -1.28
CAPN3-201ENST00000318023 DPM3Q9P2X0 92 aa7.05□□□□□ -1.28
CAPN3-201ENST00000318023 PLGLAQ15195 96 aa7.04□□□□□ -1.28
CAPN3-201ENST00000318023 NSUN5P1Q3KNT7 163 aa7.04□□□□□ -1.28
CAPN3-201ENST00000318023 SMCR5Q8TEV8 140 aa7.04□□□□□ -1.28
CAPN3-201ENST00000318023 SHANK2-AS3Q9BTD1 123 aa7.04□□□□□ -1.28
CAPN3-201ENST00000318023 CNTFRP26992 372 aa7.04□□□□□ -1.28
CAPN3-201ENST00000318023 C2orf66Q6UXQ4 117 aa7.04□□□□□ -1.28
CAPN3-201ENST00000318023 RNF152Q8N8N0 203 aa7.04□□□□□ -1.28
CAPN3-201ENST00000318023 LINC00477Q96M19 166 aa7.04□□□□□ -1.28
CAPN3-201ENST00000318023 METTL26Q96S19 204 aa7.04□□□□□ -1.28
CAPN3-201ENST00000318023 CITED2Q99967 270 aaPredicted RBP7.04□□□□□ -1.28
CAPN3-201ENST00000318023 IGHV3-64A0A075B6Q5 118 aa7.04□□□□□ -1.28
CAPN3-201ENST00000318023 OVOL1O14753 267 aa7.04□□□□□ -1.28
CAPN3-201ENST00000318023 IGKV1-17P01599 117 aa7.04□□□□□ -1.28
CAPN3-201ENST00000318023 Q6ZSV7 163 aa7.04□□□□□ -1.28
CAPN3-201ENST00000318023 SMIM2Q9BVW6 85 aa7.04□□□□□ -1.28
CAPN3-201ENST00000318023 BUB1B-PAK6H3BSN5 160 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms