RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 GAGE13Q4V321 117 aa10.81□□□□□ -0.68
PDLIM5-202ENST00000318007 NEGR1Q7Z3B1 354 aa10.81□□□□□ -0.68
PDLIM5-202ENST00000318007 C18orf15Q96N68 181 aa10.81□□□□□ -0.68
PDLIM5-202ENST00000318007 DNAH7Q8WXX0 4024 aa10.81□□□□□ -0.68
PDLIM5-202ENST00000318007 LOC389332A0A1B0GUA5 103 aa10.81□□□□□ -0.68
PDLIM5-202ENST00000318007 NPYP01303 97 aa10.81□□□□□ -0.68
PDLIM5-202ENST00000318007 IGHV3-38A0A0C4DH36 116 aa10.8□□□□□ -0.68
PDLIM5-202ENST00000318007 PAX4O43316 350 aa10.8□□□□□ -0.68
PDLIM5-202ENST00000318007 CRYBA4P53673 196 aa10.8□□□□□ -0.68
PDLIM5-202ENST00000318007 ORMDL3Q8N138 153 aa10.8□□□□□ -0.68
PDLIM5-202ENST00000318007 PHLDA1Q8WV24 401 aaPredicted RBP10.8□□□□□ -0.68
PDLIM5-202ENST00000318007 PRO0255Q9UI72 69 aa10.8□□□□□ -0.68
PDLIM5-202ENST00000318007 GYPEP15421 78 aa10.79□□□□□ -0.68
PDLIM5-202ENST00000318007 OR10J3Q5JRS4 329 aa10.79□□□□□ -0.68
PDLIM5-202ENST00000318007 ZNRF2Q8NHG8 242 aa10.79□□□□□ -0.68
PDLIM5-202ENST00000318007 VSIG2Q96IQ7 327 aa10.79□□□□□ -0.68
PDLIM5-202ENST00000318007 PRELID3AQ96N28 172 aa10.79□□□□□ -0.68
PDLIM5-202ENST00000318007 STARD9Q9P2P6 4700 aa10.79□□□□□ -0.68
PDLIM5-202ENST00000318007 IQCJQ1A5X6 159 aa10.79□□□□□ -0.68
PDLIM5-202ENST00000318007 COX19Q49B96 90 aa10.79□□□□□ -0.68
PDLIM5-202ENST00000318007 ZFAND6Q6FIF0 208 aa10.79□□□□□ -0.68
PDLIM5-202ENST00000318007 NEXN-AS1Q8NBZ9 246 aa10.79□□□□□ -0.68
PDLIM5-202ENST00000318007 IGLL5B9A064 214 aa10.78□□□□□ -0.68
PDLIM5-202ENST00000318007 TNFRSF6BO95407 300 aa10.78□□□□□ -0.68
PDLIM5-202ENST00000318007 NUDT3O95989 172 aa10.78□□□□□ -0.68
PDLIM5-202ENST00000318007 LINC00518Q8N0U6 118 aa10.78□□□□□ -0.68
PDLIM5-202ENST00000318007 MRAP2Q96G30 205 aa10.78□□□□□ -0.68
PDLIM5-202ENST00000318007 TRAV10A0A0B4J240 114 aa10.77□□□□□ -0.68
PDLIM5-202ENST00000318007 RHOHQ15669 191 aa10.77□□□□□ -0.68
PDLIM5-202ENST00000318007 NRACQ8N912 160 aa10.77□□□□□ -0.68
PDLIM5-202ENST00000318007 TENM2Q9NT68 2774 aa10.77□□□□□ -0.68
PDLIM5-202ENST00000318007 TRBV6-4A0A1B0GX49 114 aa10.77□□□□□ -0.69
PDLIM5-202ENST00000318007 PRADC1Q9BSG0 188 aa10.77□□□□□ -0.69
PDLIM5-202ENST00000318007 H7C1H1 209 aa10.76□□□□□ -0.69
PDLIM5-202ENST00000318007 ALKBH7Q9BT30 221 aaPredicted RBP10.76□□□□□ -0.69
PDLIM5-202ENST00000318007 NIT2Q9NQR4 276 aa10.76□□□□□ -0.69
PDLIM5-202ENST00000318007 TNFRSF18Q9Y5U5 241 aa10.76□□□□□ -0.69
PDLIM5-202ENST00000318007 SDHAF1A6NFY7 115 aa10.75□□□□□ -0.69
PDLIM5-202ENST00000318007 PHOX2AO14813 284 aa10.74□□□□□ -0.69
PDLIM5-202ENST00000318007 RPL36AP83881 106 aaKnown RBP10.74□□□□□ -0.69
PDLIM5-202ENST00000318007 RPL36ALQ969Q0 106 aaKnown RBP10.74□□□□□ -0.69
PDLIM5-202ENST00000318007 ST20Q9HBF5 79 aa10.74□□□□□ -0.69
PDLIM5-202ENST00000318007 TRBV7-3A0A075B6L6 115 aa10.74□□□□□ -0.69
PDLIM5-202ENST00000318007 PCP4L1A6NKN8 68 aa10.74□□□□□ -0.69
PDLIM5-202ENST00000318007 PPBPP02775 128 aa10.74□□□□□ -0.69
PDLIM5-202ENST00000318007 SUMO2P61956 95 aaKnown RBP10.74□□□□□ -0.69
PDLIM5-202ENST00000318007 CIDEAO60543 219 aa10.73□□□□□ -0.69
PDLIM5-202ENST00000318007 S100A6P06703 90 aa10.73□□□□□ -0.69
PDLIM5-202ENST00000318007 IFI27P40305 119 aaPredicted RBP10.73□□□□□ -0.69
PDLIM5-202ENST00000318007 PLECQ15149 4684 aaKnown RBP10.73□□□□□ -0.69
PDLIM5-202ENST00000318007 C18orf32Q8TCD1 76 aa10.72□□□□□ -0.69
PDLIM5-202ENST00000318007 TMEM70Q9BUB7 260 aa10.72□□□□□ -0.69
PDLIM5-202ENST00000318007 C1orf196B1AJZ1 125 aa10.72□□□□□ -0.69
PDLIM5-202ENST00000318007 TCAPO15273 167 aa10.72□□□□□ -0.69
PDLIM5-202ENST00000318007 HIST1H2BKO60814 126 aa10.72□□□□□ -0.69
PDLIM5-202ENST00000318007 HIST1H2BJP06899 126 aa10.72□□□□□ -0.69
PDLIM5-202ENST00000318007 HIST1H2BOP23527 126 aa10.72□□□□□ -0.69
PDLIM5-202ENST00000318007 HIST1H2BBP33778 126 aa10.72□□□□□ -0.69
PDLIM5-202ENST00000318007 HIST1H2BDP58876 126 aa10.72□□□□□ -0.69
PDLIM5-202ENST00000318007 HIST1H2BCP62807 126 aa10.72□□□□□ -0.69
PDLIM5-202ENST00000318007 HIST2H2BEQ16778 126 aa10.72□□□□□ -0.69
PDLIM5-202ENST00000318007 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.72□□□□□ -0.69
PDLIM5-202ENST00000318007 HIST1H2BHQ93079 126 aa10.72□□□□□ -0.69
PDLIM5-202ENST00000318007 HIST1H2BNQ99877 126 aa10.72□□□□□ -0.69
PDLIM5-202ENST00000318007 HIST1H2BMQ99879 126 aa10.72□□□□□ -0.69
PDLIM5-202ENST00000318007 MAP1LC3AQ9H492 121 aa10.72□□□□□ -0.69
PDLIM5-202ENST00000318007 ICOSQ9Y6W8 199 aa10.71□□□□□ -0.69
PDLIM5-202ENST00000318007 TRBV10-1A0A0K0K1A3 114 aa10.7□□□□□ -0.7
PDLIM5-202ENST00000318007 PRSS3P2Q8NHM4 247 aa10.7□□□□□ -0.7
PDLIM5-202ENST00000318007 UBE2D3P61077 147 aa10.7□□□□□ -0.7
PDLIM5-202ENST00000318007 UBE2D2P62837 147 aa10.7□□□□□ -0.7
PDLIM5-202ENST00000318007 PMCHP20382 165 aa10.69□□□□□ -0.7
PDLIM5-202ENST00000318007 PMCHL1Q16048 86 aa10.69□□□□□ -0.7
PDLIM5-202ENST00000318007 RNASEKQ6P5S7 137 aaKnown RBP10.69□□□□□ -0.7
PDLIM5-202ENST00000318007 CEMP1Q6PRD7 247 aaPredicted RBP10.69□□□□□ -0.7
PDLIM5-202ENST00000318007 BAGE3Q86Y29 109 aa10.69□□□□□ -0.7
PDLIM5-202ENST00000318007 ATP6V0E2Q8NHE4 81 aa10.69□□□□□ -0.7
PDLIM5-202ENST00000318007 WWC2-AS2Q96NR7 200 aa10.69□□□□□ -0.7
PDLIM5-202ENST00000318007 SMIM2Q9BVW6 85 aa10.69□□□□□ -0.7
PDLIM5-202ENST00000318007 MRPL23Q16540 153 aaKnown RBP10.68□□□□□ -0.7
PDLIM5-202ENST00000318007 MUC7Q8TAX7 377 aa10.68□□□□□ -0.7
PDLIM5-202ENST00000318007 PPP1R17O96001 155 aa10.67□□□□□ -0.7
PDLIM5-202ENST00000318007 POLR2KP53803 58 aaKnown RBP10.67□□□□□ -0.7
PDLIM5-202ENST00000318007 DNAJC30Q96LL9 226 aa10.67□□□□□ -0.7
PDLIM5-202ENST00000318007 C20orf78Q9BR46 151 aa10.67□□□□□ -0.7
PDLIM5-202ENST00000318007 LAMTOR2Q9Y2Q5 125 aa10.67□□□□□ -0.7
PDLIM5-202ENST00000318007 TRBV6-5A0A0K0K1A5 114 aa10.66□□□□□ -0.7
PDLIM5-202ENST00000318007 NUPR2A6NF83 97 aa10.66□□□□□ -0.7
PDLIM5-202ENST00000318007 I3L3M4 83 aa10.66□□□□□ -0.7
PDLIM5-202ENST00000318007 FCER1GP30273 86 aa10.66□□□□□ -0.7
PDLIM5-202ENST00000318007 NDUFA6P56556 154 aa10.66□□□□□ -0.7
PDLIM5-202ENST00000318007 RAB5BP61020 215 aa10.66□□□□□ -0.7
PDLIM5-202ENST00000318007 URB1-AS1Q96HZ7 61 aa10.66□□□□□ -0.7
PDLIM5-202ENST00000318007 DYNC2H1Q8NCM8 4307 aaKnown RBP10.66□□□□□ -0.7
PDLIM5-202ENST00000318007 LINC00694P0DN24 101 aa10.66□□□□□ -0.7
PDLIM5-202ENST00000318007 PDZD11Q5EBL8 140 aa10.66□□□□□ -0.7
PDLIM5-202ENST00000318007 NIT1Q86X76 327 aa10.66□□□□□ -0.7
PDLIM5-202ENST00000318007 KIR2DL4Q99706 377 aa10.66□□□□□ -0.7
PDLIM5-202ENST00000318007 VCYO14598 125 aa10.65□□□□□ -0.7
PDLIM5-202ENST00000318007 SERF1AO75920 110 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms