RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 ATP5LO75964 103 aa11.35□□□□□ -0.59
CALR-201ENST00000316448 ZNF56Q15929 161 aa11.35□□□□□ -0.59
CALR-201ENST00000316448 EDA2RQ9HAV5 297 aa11.35□□□□□ -0.59
CALR-201ENST00000316448 F5H697 171 aa11.34□□□□□ -0.59
CALR-201ENST00000316448 NUDT3O95989 172 aa11.34□□□□□ -0.59
CALR-201ENST00000316448 IL17DQ8TAD2 202 aa11.34□□□□□ -0.59
CALR-201ENST00000316448 RNASE8Q8TDE3 154 aaKnown RBP11.34□□□□□ -0.59
CALR-201ENST00000316448 HSBP1L1C9JCN9 74 aa11.33□□□□□ -0.6
CALR-201ENST00000316448 ODF1Q14990 250 aa11.33□□□□□ -0.6
CALR-201ENST00000316448 UFSP1Q6NVU6 142 aa11.33□□□□□ -0.6
CALR-201ENST00000316448 TOMM6Q96B49 74 aa11.33□□□□□ -0.6
CALR-201ENST00000316448 MRPL16Q9NX20 251 aaKnown RBP11.33□□□□□ -0.6
CALR-201ENST00000316448 TRBV27A0A0K0K1C4 114 aa11.33□□□□□ -0.6
CALR-201ENST00000316448 PLAC8L1A1L4L8 177 aa11.33□□□□□ -0.6
CALR-201ENST00000316448 EREGO14944 169 aa11.33□□□□□ -0.6
CALR-201ENST00000316448 LBHQ53QV2 105 aaPredicted RBP11.33□□□□□ -0.6
CALR-201ENST00000316448 SPXQ9BT56 116 aa11.33□□□□□ -0.6
CALR-201ENST00000316448 SNHG12Q9BXW3 62 aa11.33□□□□□ -0.6
CALR-201ENST00000316448 SDHAF1A6NFY7 115 aa11.32□□□□□ -0.6
CALR-201ENST00000316448 A8MWV9 139 aa11.32□□□□□ -0.6
CALR-201ENST00000316448 C1QTNF4Q9BXJ3 329 aa11.32□□□□□ -0.6
CALR-201ENST00000316448 Q6ZN92 141 aa11.31□□□□□ -0.6
CALR-201ENST00000316448 NEGR1Q7Z3B1 354 aa11.31□□□□□ -0.6
CALR-201ENST00000316448 MDFIQ99750 246 aa11.31□□□□□ -0.6
CALR-201ENST00000316448 ZMAT4Q9H898 229 aa11.31□□□□□ -0.6
CALR-201ENST00000316448 DKK2Q9UBU2 259 aa11.31□□□□□ -0.6
CALR-201ENST00000316448 VCYO14598 125 aa11.31□□□□□ -0.6
CALR-201ENST00000316448 NACAE9PAV3 2078 aa11.3□□□□□ -0.6
CALR-201ENST00000316448 IGHV3-73A0A0B4J1V6 119 aa11.3□□□□□ -0.6
CALR-201ENST00000316448 C2orf66Q6UXQ4 117 aa11.3□□□□□ -0.6
CALR-201ENST00000316448 TMEM263Q8WUH6 116 aaKnown RBP11.3□□□□□ -0.6
CALR-201ENST00000316448 C2orf88Q9BSF0 95 aa11.3□□□□□ -0.6
CALR-201ENST00000316448 M0R143 59 aa11.29□□□□□ -0.6
CALR-201ENST00000316448 PRSS1P07477 247 aa11.29□□□□□ -0.6
CALR-201ENST00000316448 HNRNPA3P51991 378 aaKnown RBP11.29□□□□□ -0.6
CALR-201ENST00000316448 Q6ZSN1 163 aa11.29□□□□□ -0.6
CALR-201ENST00000316448 KIR2DL4Q99706 377 aa11.29□□□□□ -0.6
CALR-201ENST00000316448 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.29□□□□□ -0.6
CALR-201ENST00000316448 CFAP126Q5VTH2 177 aa11.29□□□□□ -0.6
CALR-201ENST00000316448 ZFP2Q6ZN57 461 aa11.29□□□□□ -0.6
CALR-201ENST00000316448 G3V4G9 280 aa11.28□□□□□ -0.6
CALR-201ENST00000316448 H7C1H1 209 aa11.28□□□□□ -0.6
CALR-201ENST00000316448 IGHV4-30-4P0DP06 118 aa11.28□□□□□ -0.6
CALR-201ENST00000316448 EGFEM1PQ0D2K5 195 aa11.28□□□□□ -0.6
CALR-201ENST00000316448 Q6ZTI0 123 aa11.28□□□□□ -0.6
CALR-201ENST00000316448 MRPS16Q9Y3D3 137 aaKnown RBP11.28□□□□□ -0.6
CALR-201ENST00000316448 PKD1L1Q8TDX9 2849 aa11.28□□□□□ -0.6
CALR-201ENST00000316448 TRAV12-1A0A0B4J245 112 aa11.27□□□□□ -0.6
CALR-201ENST00000316448 LINC01549A6NIU2 74 aa11.27□□□□□ -0.6
CALR-201ENST00000316448 RHODO00212 210 aa11.27□□□□□ -0.6
CALR-201ENST00000316448 RIPPLY3P57055 190 aa11.27□□□□□ -0.6
CALR-201ENST00000316448 ANKRD39Q53RE8 183 aa11.27□□□□□ -0.6
CALR-201ENST00000316448 SCGB3A1Q96QR1 104 aa11.27□□□□□ -0.6
CALR-201ENST00000316448 NOP10Q9NPE3 64 aaKnown RBP11.27□□□□□ -0.6
CALR-201ENST00000316448 TP73-AS1Q9UF72 201 aa11.27□□□□□ -0.6
CALR-201ENST00000316448 Q9UF83 564 aa11.27□□□□□ -0.6
CALR-201ENST00000316448 X6R8D5 127 aa11.27□□□□□ -0.6
CALR-201ENST00000316448 RS1O15537 224 aa11.27□□□□□ -0.61
CALR-201ENST00000316448 G0S2P27469 103 aa11.27□□□□□ -0.61
CALR-201ENST00000316448 RRN3P1Q2M238 152 aa11.27□□□□□ -0.61
CALR-201ENST00000316448 SLC25A34Q6PIV7 304 aa11.27□□□□□ -0.61
CALR-201ENST00000316448 ERASQ7Z444 233 aa11.27□□□□□ -0.61
CALR-201ENST00000316448 CYSLTR1Q9Y271 337 aa11.27□□□□□ -0.61
CALR-201ENST00000316448 A0A087WX48 190 aa11.26□□□□□ -0.61
CALR-201ENST00000316448 TRGV1A0A0A0MS02 117 aa11.26□□□□□ -0.61
CALR-201ENST00000316448 COX8AP10176 69 aa11.26□□□□□ -0.61
CALR-201ENST00000316448 ANK2Q01484 3957 aa11.25□□□□□ -0.61
CALR-201ENST00000316448 DPM2O94777 84 aa11.25□□□□□ -0.61
CALR-201ENST00000316448 IGKCP01834 107 aa11.25□□□□□ -0.61
CALR-201ENST00000316448 P0DMU3 169 aa11.25□□□□□ -0.61
CALR-201ENST00000316448 FAM231AP0DMU4 169 aa11.25□□□□□ -0.61
CALR-201ENST00000316448 FAM231CP0DMU5 169 aa11.25□□□□□ -0.61
CALR-201ENST00000316448 STPG4Q8N801 248 aa11.25□□□□□ -0.61
CALR-201ENST00000316448 C16orf74Q96GX8 76 aa11.25□□□□□ -0.61
CALR-201ENST00000316448 HHLA3Q9XRX5 114 aa11.25□□□□□ -0.61
CALR-201ENST00000316448 TP53TG1Q9Y2A0 90 aa11.25□□□□□ -0.61
CALR-201ENST00000316448 TSHBP01222 138 aa11.25□□□□□ -0.61
CALR-201ENST00000316448 DAZ2Q13117 558 aaKnown RBP11.25□□□□□ -0.61
CALR-201ENST00000316448 RHOHQ15669 191 aa11.25□□□□□ -0.61
CALR-201ENST00000316448 NEXN-AS1Q8NBZ9 246 aa11.25□□□□□ -0.61
CALR-201ENST00000316448 KIR2DL5BQ8NHK3 375 aa11.25□□□□□ -0.61
CALR-201ENST00000316448 DEFB104AQ8WTQ1 72 aa11.25□□□□□ -0.61
CALR-201ENST00000316448 MRPL35Q9NZE8 188 aaKnown RBP11.25□□□□□ -0.61
CALR-201ENST00000316448 DEFB135Q30KP9 77 aa11.24□□□□□ -0.61
CALR-201ENST00000316448 BAALCQ8WXS3 180 aa11.24□□□□□ -0.61
CALR-201ENST00000316448 OVOL2Q9BRP0 275 aa11.24□□□□□ -0.61
CALR-201ENST00000316448 DNAH3Q8TD57 4116 aa11.24□□□□□ -0.61
CALR-201ENST00000316448 IGIPA6NJ69 53 aa11.23□□□□□ -0.61
CALR-201ENST00000316448 I3L3M4 83 aa11.23□□□□□ -0.61
CALR-201ENST00000316448 IGHV3-53P01767 116 aa11.23□□□□□ -0.61
CALR-201ENST00000316448 FGF6P10767 208 aa11.23□□□□□ -0.61
CALR-201ENST00000316448 ZNF479Q96JC4 524 aa11.23□□□□□ -0.61
CALR-201ENST00000316448 F8VRH5 84 aa11.23□□□□□ -0.61
CALR-201ENST00000316448 PLNP26678 52 aa11.23□□□□□ -0.61
CALR-201ENST00000316448 TIMM17AQ99595 171 aa11.23□□□□□ -0.61
CALR-201ENST00000316448 EMP1P54849 157 aa11.22□□□□□ -0.61
CALR-201ENST00000316448 APOC4P55056 127 aa11.22□□□□□ -0.61
CALR-201ENST00000316448 RPL39P62891 51 aaKnown RBP11.22□□□□□ -0.61
CALR-201ENST00000316448 SAMD5Q5TGI4 173 aa11.22□□□□□ -0.61
CALR-201ENST00000316448 GAGE12BA1L429 117 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms