RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 CBLN2Q8IUK8 224 aa8.79□□□□□ -1
CHMP2A-201ENST00000312547 TENM2Q9NT68 2774 aa8.78□□□□□ -1
CHMP2A-201ENST00000312547 H7C1H1 209 aa8.78□□□□□ -1
CHMP2A-201ENST00000312547 MRPL23Q16540 153 aaKnown RBP8.78□□□□□ -1
CHMP2A-201ENST00000312547 MRPL51Q4U2R6 128 aaKnown RBP8.78□□□□□ -1
CHMP2A-201ENST00000312547 TMEM136Q6ZRR5 245 aa8.78□□□□□ -1
CHMP2A-201ENST00000312547 NEXN-AS1Q8NBZ9 246 aa8.78□□□□□ -1
CHMP2A-201ENST00000312547 MRAP2Q96G30 205 aa8.78□□□□□ -1
CHMP2A-201ENST00000312547 ICOSQ9Y6W8 199 aa8.78□□□□□ -1
CHMP2A-201ENST00000312547 TRAV26-2A0A0B4J265 109 aa8.77□□□□□ -1.01
CHMP2A-201ENST00000312547 GAGE12JA6NER3 117 aa8.77□□□□□ -1.01
CHMP2A-201ENST00000312547 GAS8-AS1O95177 125 aa8.77□□□□□ -1.01
CHMP2A-201ENST00000312547 NUDT3O95989 172 aa8.77□□□□□ -1.01
CHMP2A-201ENST00000312547 GAGE1Q13065 139 aa8.77□□□□□ -1.01
CHMP2A-201ENST00000312547 GAGE4Q13068 117 aa8.77□□□□□ -1.01
CHMP2A-201ENST00000312547 GAGE5Q13069 117 aa8.77□□□□□ -1.01
CHMP2A-201ENST00000312547 GAGE13Q4V321 117 aa8.77□□□□□ -1.01
CHMP2A-201ENST00000312547 GNB1LQ9BYB4 327 aa8.77□□□□□ -1.01
CHMP2A-201ENST00000312547 TRBV7-3A0A075B6L6 115 aa8.76□□□□□ -1.01
CHMP2A-201ENST00000312547 SRIP30626 198 aa8.76□□□□□ -1.01
CHMP2A-201ENST00000312547 COX19Q49B96 90 aa8.76□□□□□ -1.01
CHMP2A-201ENST00000312547 DNAJC30Q96LL9 226 aa8.76□□□□□ -1.01
CHMP2A-201ENST00000312547 NIT2Q9NQR4 276 aa8.76□□□□□ -1.01
CHMP2A-201ENST00000312547 HYDINQ4G0P3 5121 aa8.75□□□□□ -1.01
CHMP2A-201ENST00000312547 TRBV6-5A0A0K0K1A5 114 aa8.75□□□□□ -1.01
CHMP2A-201ENST00000312547 SMKR1H3BMG3 65 aa8.75□□□□□ -1.01
CHMP2A-201ENST00000312547 SCO1O75880 301 aa8.75□□□□□ -1.01
CHMP2A-201ENST00000312547 HLA-DQA1P01909 254 aa8.75□□□□□ -1.01
CHMP2A-201ENST00000312547 RPS10P46783 165 aaKnown RBP8.75□□□□□ -1.01
CHMP2A-201ENST00000312547 UBE2D3P61077 147 aa8.75□□□□□ -1.01
CHMP2A-201ENST00000312547 UBE2D2P62837 147 aa8.75□□□□□ -1.01
CHMP2A-201ENST00000312547 RPL36AP83881 106 aaKnown RBP8.75□□□□□ -1.01
CHMP2A-201ENST00000312547 NEGR1Q7Z3B1 354 aa8.75□□□□□ -1.01
CHMP2A-201ENST00000312547 SH2D6Q7Z4S9 175 aa8.75□□□□□ -1.01
CHMP2A-201ENST00000312547 NRACQ8N912 160 aa8.75□□□□□ -1.01
CHMP2A-201ENST00000312547 ZNRF2Q8NHG8 242 aa8.75□□□□□ -1.01
CHMP2A-201ENST00000312547 RPL36ALQ969Q0 106 aaKnown RBP8.75□□□□□ -1.01
CHMP2A-201ENST00000312547 RPL39LQ96EH5 51 aaKnown RBP8.75□□□□□ -1.01
CHMP2A-201ENST00000312547 NCR2O95944 276 aa8.74□□□□□ -1.01
CHMP2A-201ENST00000312547 PPBPP02775 128 aa8.74□□□□□ -1.01
CHMP2A-201ENST00000312547 TIRAPP58753 221 aa8.74□□□□□ -1.01
CHMP2A-201ENST00000312547 MT-ND6P03923 174 aa8.73□□□□□ -1.01
CHMP2A-201ENST00000312547 CKS2P33552 79 aa8.73□□□□□ -1.01
CHMP2A-201ENST00000312547 ESRGQ1W209 222 aa8.73□□□□□ -1.01
CHMP2A-201ENST00000312547 LYPD5Q6UWN5 251 aa8.73□□□□□ -1.01
CHMP2A-201ENST00000312547 ATP6V0E2Q8NHE4 81 aa8.73□□□□□ -1.01
CHMP2A-201ENST00000312547 TNFRSF18Q9Y5U5 241 aa8.73□□□□□ -1.01
CHMP2A-201ENST00000312547 COLCA2A8K830 154 aa8.72□□□□□ -1.01
CHMP2A-201ENST00000312547 D6R8Y8 96 aa8.72□□□□□ -1.01
CHMP2A-201ENST00000312547 PPP1R17O96001 155 aa8.72□□□□□ -1.01
CHMP2A-201ENST00000312547 APCSP02743 223 aa8.72□□□□□ -1.01
CHMP2A-201ENST00000312547 OR10J3Q5JRS4 329 aa8.72□□□□□ -1.01
CHMP2A-201ENST00000312547 ORMDL3Q8N138 153 aa8.72□□□□□ -1.01
CHMP2A-201ENST00000312547 GTSF1LQ9H1H1 148 aa8.72□□□□□ -1.01
CHMP2A-201ENST00000312547 VPS13DQ5THJ4 4388 aa8.71□□□□□ -1.01
CHMP2A-201ENST00000312547 PHOX2AO14813 284 aa8.71□□□□□ -1.02
CHMP2A-201ENST00000312547 DAZ4Q86SG3 579 aaKnown RBP8.71□□□□□ -1.02
CHMP2A-201ENST00000312547 MRPL18Q9H0U6 180 aaKnown RBP8.71□□□□□ -1.02
CHMP2A-201ENST00000312547 DAZ3Q9NR90 486 aaKnown RBP8.71□□□□□ -1.02
CHMP2A-201ENST00000312547 LINC00588Q9Y4M8 146 aa8.71□□□□□ -1.02
CHMP2A-201ENST00000312547 ALMS1Q8TCU4 4167 aa8.7□□□□□ -1.02
CHMP2A-201ENST00000312547 SDHAF1A6NFY7 115 aa8.7□□□□□ -1.02
CHMP2A-201ENST00000312547 TNFRSF6BO95407 300 aa8.7□□□□□ -1.02
CHMP2A-201ENST00000312547 NPYP01303 97 aa8.7□□□□□ -1.02
CHMP2A-201ENST00000312547 POLR2KP53803 58 aaKnown RBP8.7□□□□□ -1.02
CHMP2A-201ENST00000312547 SUMO2P61956 95 aaKnown RBP8.7□□□□□ -1.02
CHMP2A-201ENST00000312547 RPL32P62910 135 aaKnown RBP8.7□□□□□ -1.02
CHMP2A-201ENST00000312547 LGALS9CQ6DKI2 356 aa8.7□□□□□ -1.02
CHMP2A-201ENST00000312547 PRELID3AQ96N28 172 aa8.7□□□□□ -1.02
CHMP2A-201ENST00000312547 C20orf78Q9BR46 151 aa8.7□□□□□ -1.02
CHMP2A-201ENST00000312547 TMEM70Q9BUB7 260 aa8.7□□□□□ -1.02
CHMP2A-201ENST00000312547 ST20Q9HBF5 79 aa8.7□□□□□ -1.02
CHMP2A-201ENST00000312547 LAMTOR2Q9Y2Q5 125 aa8.7□□□□□ -1.02
CHMP2A-201ENST00000312547 IGHV3-38A0A0C4DH36 116 aa8.69□□□□□ -1.02
CHMP2A-201ENST00000312547 CCL18P55774 89 aa8.69□□□□□ -1.02
CHMP2A-201ENST00000312547 KIAA1644Q3SXP7 199 aa8.69□□□□□ -1.02
CHMP2A-201ENST00000312547 MRPS16Q9Y3D3 137 aaKnown RBP8.69□□□□□ -1.02
CHMP2A-201ENST00000312547 TRAPPC1Q9Y5R8 145 aa8.69□□□□□ -1.02
CHMP2A-201ENST00000312547 TRBV27A0A0K0K1C4 114 aa8.68□□□□□ -1.02
CHMP2A-201ENST00000312547 PRSS47A8MTI9 375 aa8.68□□□□□ -1.02
CHMP2A-201ENST00000312547 FABP9Q0Z7S8 132 aa8.68□□□□□ -1.02
CHMP2A-201ENST00000312547 LELP1Q5T871 98 aa8.68□□□□□ -1.02
CHMP2A-201ENST00000312547 NTM-AS1Q6ZSK4 140 aa8.68□□□□□ -1.02
CHMP2A-201ENST00000312547 LINC00476Q8WZB0 136 aa8.68□□□□□ -1.02
CHMP2A-201ENST00000312547 ALKBH7Q9BT30 221 aaPredicted RBP8.68□□□□□ -1.02
CHMP2A-201ENST00000312547 UPK3BQ9BT76 320 aa8.68□□□□□ -1.02
CHMP2A-201ENST00000312547 TRBV6-8A0A0A6YYG3 113 aa8.67□□□□□ -1.02
CHMP2A-201ENST00000312547 VCYO14598 125 aa8.67□□□□□ -1.02
CHMP2A-201ENST00000312547 RAB5AP20339 215 aa8.67□□□□□ -1.02
CHMP2A-201ENST00000312547 TMEM97Q5BJF2 176 aa8.67□□□□□ -1.02
CHMP2A-201ENST00000312547 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.67□□□□□ -1.02
CHMP2A-201ENST00000312547 I3L3M4 83 aa8.66□□□□□ -1.02
CHMP2A-201ENST00000312547 IQCJQ1A5X6 159 aa8.66□□□□□ -1.02
CHMP2A-201ENST00000312547 SMIM2Q9BVW6 85 aa8.66□□□□□ -1.02
CHMP2A-201ENST00000312547 IGLV2-18A0A075B6J9 118 aa8.65□□□□□ -1.02
CHMP2A-201ENST00000312547 TSHBP01222 138 aa8.65□□□□□ -1.02
CHMP2A-201ENST00000312547 COTL1Q14019 142 aa8.65□□□□□ -1.02
CHMP2A-201ENST00000312547 UBE2DNLQ8IWF7 75 aa8.65□□□□□ -1.02
CHMP2A-201ENST00000312547 TRGC2P03986 189 aa8.64□□□□□ -1.03
CHMP2A-201ENST00000312547 PMCHP20382 165 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms