RNA–Protein interactions for RNA: ENST00000311008.15

SPNS1-201, Transcript of sphingolipid transporter 1 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPNS1, Length 2,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-201ENST00000311008 RBMY1A1P0DJD3 496 aaKnown RBP14.37□□□□□ -0.11
SPNS1-201ENST00000311008 RBMY1CP0DJD4 496 aa14.37□□□□□ -0.11
SPNS1-201ENST00000311008 RBMY1FQ15415 496 aaKnown RBP14.37□□□□□ -0.11
SPNS1-201ENST00000311008 ZFYVE26Q68DK2 2539 aa14.37□□□□□ -0.11
SPNS1-201ENST00000311008 TMEM170BQ5T4T1 132 aa14.37□□□□□ -0.11
SPNS1-201ENST00000311008 TMEM61Q8N0U2 210 aa14.37□□□□□ -0.11
SPNS1-201ENST00000311008 DYNLRB2Q8TF09 96 aa14.37□□□□□ -0.11
SPNS1-201ENST00000311008 USP9YO00507 2555 aaPredicted RBP14.37□□□□□ -0.11
SPNS1-201ENST00000311008 M0R2P5 195 aa14.36□□□□□ -0.11
SPNS1-201ENST00000311008 SRSF9Q13242 221 aaKnown RBP eCLIP14.36□□□□□ -0.11
SPNS1-201ENST00000311008 RRN3P1Q2M238 152 aa14.36□□□□□ -0.11
SPNS1-201ENST00000311008 MAP1AP78559 2803 aaPredicted RBP14.36□□□□□ -0.11
SPNS1-201ENST00000311008 P0DMU3 169 aa14.35□□□□□ -0.11
SPNS1-201ENST00000311008 FAM231AP0DMU4 169 aa14.35□□□□□ -0.11
SPNS1-201ENST00000311008 FAM231CP0DMU5 169 aa14.35□□□□□ -0.11
SPNS1-201ENST00000311008 ZNF415Q09FC8 603 aa14.35□□□□□ -0.11
SPNS1-201ENST00000311008 DEFB104AQ8WTQ1 72 aa14.35□□□□□ -0.11
SPNS1-201ENST00000311008 DUX3Q96PT4 197 aa14.35□□□□□ -0.11
SPNS1-201ENST00000311008 LINC00467Q9BRT7 94 aa14.35□□□□□ -0.11
SPNS1-201ENST00000311008 SCGB1A1P11684 91 aa14.35□□□□□ -0.11
SPNS1-201ENST00000311008 EMP1P54849 157 aa14.35□□□□□ -0.11
SPNS1-201ENST00000311008 ZNRF2Q8NHG8 242 aa14.35□□□□□ -0.11
SPNS1-201ENST00000311008 AGRNO00468 2067 aa14.35□□□□□ -0.11
SPNS1-201ENST00000311008 CRYBG3Q68DQ2 2970 aa14.34□□□□□ -0.11
SPNS1-201ENST00000311008 KHDC1LQ5JSQ8 128 aa14.34□□□□□ -0.11
SPNS1-201ENST00000311008 KLHL30-AS1Q8NEE0 82 aa14.34□□□□□ -0.11
SPNS1-201ENST00000311008 PLEKHB2Q96CS7 222 aa14.34□□□□□ -0.11
SPNS1-201ENST00000311008 RAX2Q96IS3 184 aa14.34□□□□□ -0.11
SPNS1-201ENST00000311008 SPANXB1Q9NS25 103 aaPredicted RBP14.34□□□□□ -0.11
SPNS1-201ENST00000311008 DLX4Q92988 240 aaPredicted RBP14.33□□□□□ -0.12
SPNS1-201ENST00000311008 MAP6D1Q9H9H5 199 aa14.33□□□□□ -0.12
SPNS1-201ENST00000311008 PYGO1Q9Y3Y4 419 aa14.33□□□□□ -0.12
SPNS1-201ENST00000311008 FBN2P35556 2912 aa14.33□□□□□ -0.12
SPNS1-201ENST00000311008 DOPEY2Q9Y3R5 2298 aa14.33□□□□□ -0.12
SPNS1-201ENST00000311008 A0A0J9YY99 117 aa14.33□□□□□ -0.12
SPNS1-201ENST00000311008 RBMY1BA6NDE4 496 aaKnown RBP14.33□□□□□ -0.12
SPNS1-201ENST00000311008 RBMY1EA6NEQ0 496 aaKnown RBP14.33□□□□□ -0.12
SPNS1-201ENST00000311008 F8W1H4 67 aa14.33□□□□□ -0.12
SPNS1-201ENST00000311008 RBMY1DP0C7P1 496 aaKnown RBP14.33□□□□□ -0.12
SPNS1-201ENST00000311008 HTN1P15515 57 aa14.33□□□□□ -0.12
SPNS1-201ENST00000311008 DEFB114Q30KQ6 69 aa14.33□□□□□ -0.12
SPNS1-201ENST00000311008 CRYBA4P53673 196 aa14.32□□□□□ -0.12
SPNS1-201ENST00000311008 VCX2Q9H322 139 aa14.32□□□□□ -0.12
SPNS1-201ENST00000311008 ZNF462Q96JM2 2506 aa14.32□□□□□ -0.12
SPNS1-201ENST00000311008 FAM208BQ5VWN6 2430 aa14.32□□□□□ -0.12
SPNS1-201ENST00000311008 G3V4G9 280 aa14.31□□□□□ -0.12
SPNS1-201ENST00000311008 SAP30O75446 220 aa14.31□□□□□ -0.12
SPNS1-201ENST00000311008 KRTAP1-3Q8IUG1 177 aa14.31□□□□□ -0.12
SPNS1-201ENST00000311008 TNFRSF18Q9Y5U5 241 aa14.31□□□□□ -0.12
SPNS1-201ENST00000311008 J3QQQ9 107 aa14.31□□□□□ -0.12
SPNS1-201ENST00000311008 LGALS3P17931 250 aaKnown RBP14.31□□□□□ -0.12
SPNS1-201ENST00000311008 SPXQ9BT56 116 aa14.31□□□□□ -0.12
SPNS1-201ENST00000311008 RHODO00212 210 aa14.3□□□□□ -0.12
SPNS1-201ENST00000311008 UBE2D1P51668 147 aa14.3□□□□□ -0.12
SPNS1-201ENST00000311008 UTP20O75691 2785 aaKnown RBP14.3□□□□□ -0.12
SPNS1-201ENST00000311008 IGLV4-3A0A075B6K6 122 aa14.3□□□□□ -0.12
SPNS1-201ENST00000311008 TRAV25A0A0B4J276 109 aa14.3□□□□□ -0.12
SPNS1-201ENST00000311008 LEPROTO15243 131 aa14.3□□□□□ -0.12
SPNS1-201ENST00000311008 SLC25A29Q8N8R3 303 aa14.3□□□□□ -0.12
SPNS1-201ENST00000311008 TMEM223A0PJW6 202 aa14.29□□□□□ -0.12
SPNS1-201ENST00000311008 INSP01308 110 aa14.29□□□□□ -0.12
SPNS1-201ENST00000311008 UBR5O95071 2799 aaPredicted RBP14.29□□□□□ -0.12
SPNS1-201ENST00000311008 LINC01587Q99440 93 aa14.29□□□□□ -0.12
SPNS1-201ENST00000311008 OPRPNQ99935 248 aaPredicted RBP14.29□□□□□ -0.12
SPNS1-201ENST00000311008 A0A1B0GV72 72 aa14.28□□□□□ -0.12
SPNS1-201ENST00000311008 Q6ZSV7 163 aa14.28□□□□□ -0.12
SPNS1-201ENST00000311008 TSPEAR-AS2P59090 65 aa14.27□□□□□ -0.12
SPNS1-201ENST00000311008 MRPL16Q9NX20 251 aaKnown RBP14.27□□□□□ -0.12
SPNS1-201ENST00000311008 DNAJC30Q96LL9 226 aa14.27□□□□□ -0.13
SPNS1-201ENST00000311008 PGPEP1Q9NXJ5 209 aa14.27□□□□□ -0.13
SPNS1-201ENST00000311008 IGHV3-73A0A0B4J1V6 119 aa14.26□□□□□ -0.13
SPNS1-201ENST00000311008 ZNF22P17026 224 aaPredicted RBP14.26□□□□□ -0.13
SPNS1-201ENST00000311008 CFAP126Q5VTH2 177 aa14.26□□□□□ -0.13
SPNS1-201ENST00000311008 AMELXQ99217 191 aa14.26□□□□□ -0.13
SPNS1-201ENST00000311008 CSMD2Q7Z408 3487 aa14.26□□□□□ -0.13
SPNS1-201ENST00000311008 POLQO75417 2590 aa14.26□□□□□ -0.13
SPNS1-201ENST00000311008 BEAN1Q3B7T3 259 aa14.26□□□□□ -0.13
SPNS1-201ENST00000311008 C11orf72Q8NBR9 251 aa14.26□□□□□ -0.13
SPNS1-201ENST00000311008 EPG5Q9HCE0 2579 aa14.25□□□□□ -0.13
SPNS1-201ENST00000311008 SORL1Q92673 2214 aa14.25□□□□□ -0.13
SPNS1-201ENST00000311008 IGHV3-30P01768 117 aa14.25□□□□□ -0.13
SPNS1-201ENST00000311008 IGHV3-30-5P0DP03 117 aa14.25□□□□□ -0.13
SPNS1-201ENST00000311008 CD28P10747 220 aa14.25□□□□□ -0.13
SPNS1-201ENST00000311008 PROK1P58294 105 aa14.25□□□□□ -0.13
SPNS1-201ENST00000311008 LYRM7Q5U5X0 104 aa14.25□□□□□ -0.13
SPNS1-201ENST00000311008 LRRK2Q5S007 2527 aa14.24□□□□□ -0.13
SPNS1-201ENST00000311008 NAV2Q8IVL1 2488 aa14.24□□□□□ -0.13
SPNS1-201ENST00000311008 ZANQ9Y493 2812 aa14.24□□□□□ -0.13
SPNS1-201ENST00000311008 H3BMG7 143 aa14.24□□□□□ -0.13
SPNS1-201ENST00000311008 RPL24P83731 157 aaKnown RBP14.24□□□□□ -0.13
SPNS1-201ENST00000311008 PTPN13Q12923 2485 aa14.24□□□□□ -0.13
SPNS1-201ENST00000311008 DNAJC9-AS1A6NH13 148 aa14.23□□□□□ -0.13
SPNS1-201ENST00000311008 IGHV3-53P01767 116 aa14.23□□□□□ -0.13
SPNS1-201ENST00000311008 GAGE13Q4V321 117 aa14.23□□□□□ -0.13
SPNS1-201ENST00000311008 SPANXA1Q9NS26 97 aa14.23□□□□□ -0.13
SPNS1-201ENST00000311008 CREBBPQ92793 2442 aa14.23□□□□□ -0.13
SPNS1-201ENST00000311008 A0A0J9YXV3 536 aa14.23□□□□□ -0.13
SPNS1-201ENST00000311008 MRPS36P82909 103 aaKnown RBP14.22□□□□□ -0.13
SPNS1-201ENST00000311008 FHL3Q13643 280 aa14.22□□□□□ -0.13
SPNS1-201ENST00000311008 NDUFA11Q86Y39 141 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms