RNA–Protein interactions for RNA: ENST00000304465.7

SRGAP2C-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5 BASIC

Gene SRGAP2C, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-201ENST00000304465 NUDT3O95989 172 aa11.24□□□□□ -0.61
SRGAP2C-201ENST00000304465 GATA1P15976 413 aaPredicted RBP11.24□□□□□ -0.61
SRGAP2C-201ENST00000304465 NDUFA6P56556 154 aa11.24□□□□□ -0.61
SRGAP2C-201ENST00000304465 LGALS9BQ3B8N2 356 aa11.24□□□□□ -0.61
SRGAP2C-201ENST00000304465 EPPK1P58107 5090 aaKnown RBP11.23□□□□□ -0.61
SRGAP2C-201ENST00000304465 KMT2AQ03164 3969 aa11.23□□□□□ -0.61
SRGAP2C-201ENST00000304465 RS1O15537 224 aa11.23□□□□□ -0.61
SRGAP2C-201ENST00000304465 IQCJQ1A5X6 159 aa11.23□□□□□ -0.61
SRGAP2C-201ENST00000304465 CFAP126Q5VTH2 177 aa11.23□□□□□ -0.61
SRGAP2C-201ENST00000304465 ORMDL3Q8N138 153 aa11.23□□□□□ -0.61
SRGAP2C-201ENST00000304465 LINC00612Q8N6U2 182 aa11.23□□□□□ -0.61
SRGAP2C-201ENST00000304465 NRACQ8N912 160 aa11.23□□□□□ -0.61
SRGAP2C-201ENST00000304465 TRGV1A0A0A0MS02 117 aa11.22□□□□□ -0.61
SRGAP2C-201ENST00000304465 GAGE12BA1L429 117 aa11.22□□□□□ -0.61
SRGAP2C-201ENST00000304465 A8MWV9 139 aa11.22□□□□□ -0.61
SRGAP2C-201ENST00000304465 GAGE7O76087 117 aa11.22□□□□□ -0.61
SRGAP2C-201ENST00000304465 NPYP01303 97 aa11.22□□□□□ -0.61
SRGAP2C-201ENST00000304465 PPBPP02775 128 aa11.22□□□□□ -0.61
SRGAP2C-201ENST00000304465 GAGE12FP0CL80 117 aa11.22□□□□□ -0.61
SRGAP2C-201ENST00000304465 GAGE12GP0CL81 117 aa11.22□□□□□ -0.61
SRGAP2C-201ENST00000304465 GAGE12IP0CL82 117 aa11.22□□□□□ -0.61
SRGAP2C-201ENST00000304465 CKS2P33552 79 aa11.22□□□□□ -0.61
SRGAP2C-201ENST00000304465 SNRPEP62304 92 aaKnown RBP11.22□□□□□ -0.61
SRGAP2C-201ENST00000304465 OR10J3Q5JRS4 329 aa11.22□□□□□ -0.61
SRGAP2C-201ENST00000304465 LINC00336Q6ZUF6 198 aa11.22□□□□□ -0.61
SRGAP2C-201ENST00000304465 MRAP2Q96G30 205 aa11.22□□□□□ -0.61
SRGAP2C-201ENST00000304465 URB1-AS1Q96HZ7 61 aa11.22□□□□□ -0.61
SRGAP2C-201ENST00000304465 PRELID3AQ96N28 172 aa11.22□□□□□ -0.61
SRGAP2C-201ENST00000304465 IGLV2-18A0A075B6J9 118 aa11.21□□□□□ -0.61
SRGAP2C-201ENST00000304465 NUPR1O60356 82 aa11.21□□□□□ -0.61
SRGAP2C-201ENST00000304465 MGPP08493 103 aa11.2□□□□□ -0.62
SRGAP2C-201ENST00000304465 HOXA5P20719 270 aa11.2□□□□□ -0.62
SRGAP2C-201ENST00000304465 FAM74A4Q5TZK3 123 aa11.2□□□□□ -0.62
SRGAP2C-201ENST00000304465 SUMO4Q6EEV6 95 aa11.2□□□□□ -0.62
SRGAP2C-201ENST00000304465 Q6ZSN1 163 aa11.2□□□□□ -0.62
SRGAP2C-201ENST00000304465 TRGV2A0A075B6R0 118 aa11.19□□□□□ -0.62
SRGAP2C-201ENST00000304465 SMIM17P0DL12 118 aa11.19□□□□□ -0.62
SRGAP2C-201ENST00000304465 CCL18P55774 89 aa11.19□□□□□ -0.62
SRGAP2C-201ENST00000304465 M0QY20 66 aa11.19□□□□□ -0.62
SRGAP2C-201ENST00000304465 SERF1AO75920 110 aa11.19□□□□□ -0.62
SRGAP2C-201ENST00000304465 TNFRSF6BO95407 300 aa11.19□□□□□ -0.62
SRGAP2C-201ENST00000304465 S100A6P06703 90 aa11.19□□□□□ -0.62
SRGAP2C-201ENST00000304465 RPL39LQ96EH5 51 aaKnown RBP11.19□□□□□ -0.62
SRGAP2C-201ENST00000304465 LAMTOR2Q9Y2Q5 125 aa11.19□□□□□ -0.62
SRGAP2C-201ENST00000304465 LOC105371267A0A1B0GV96 52 aa11.18□□□□□ -0.62
SRGAP2C-201ENST00000304465 IFITM10A6NMD0 228 aa11.18□□□□□ -0.62
SRGAP2C-201ENST00000304465 PRSS47A8MTI9 375 aa11.18□□□□□ -0.62
SRGAP2C-201ENST00000304465 ESDP10768 282 aa11.18□□□□□ -0.62
SRGAP2C-201ENST00000304465 ZFP2Q6ZN57 461 aa11.18□□□□□ -0.62
SRGAP2C-201ENST00000304465 ZNF479Q96JC4 524 aa11.18□□□□□ -0.62
SRGAP2C-201ENST00000304465 TRAV26-1A0A087WT03 109 aa11.17□□□□□ -0.62
SRGAP2C-201ENST00000304465 IGHV3-73A0A0B4J1V6 119 aa11.17□□□□□ -0.62
SRGAP2C-201ENST00000304465 TRAV4A0A0B4J268 109 aa11.17□□□□□ -0.62
SRGAP2C-201ENST00000304465 BAGE3Q86Y29 109 aa11.17□□□□□ -0.62
SRGAP2C-201ENST00000304465 HIST3H2BBQ8N257 126 aa11.17□□□□□ -0.62
SRGAP2C-201ENST00000304465 C18orf15Q96N68 181 aa11.17□□□□□ -0.62
SRGAP2C-201ENST00000304465 A0A0J9YY99 117 aa11.16□□□□□ -0.62
SRGAP2C-201ENST00000304465 RHODO00212 210 aa11.16□□□□□ -0.62
SRGAP2C-201ENST00000304465 ZNF56Q15929 161 aa11.16□□□□□ -0.62
SRGAP2C-201ENST00000304465 NIT1Q86X76 327 aa11.16□□□□□ -0.62
SRGAP2C-201ENST00000304465 Q9UF83 564 aa11.16□□□□□ -0.62
SRGAP2C-201ENST00000304465 BIRC6Q9NR09 4857 aa11.15□□□□□ -0.62
SRGAP2C-201ENST00000304465 F5H697 171 aa11.15□□□□□ -0.62
SRGAP2C-201ENST00000304465 IGHV3-53P01767 116 aa11.15□□□□□ -0.62
SRGAP2C-201ENST00000304465 OR4C5Q8NGB2 326 aa11.15□□□□□ -0.62
SRGAP2C-201ENST00000304465 LINC01546A6NGU7 62 aa11.14□□□□□ -0.63
SRGAP2C-201ENST00000304465 IFI27P40305 119 aaPredicted RBP11.14□□□□□ -0.63
SRGAP2C-201ENST00000304465 TRBV6-5A0A0K0K1A5 114 aa11.13□□□□□ -0.63
SRGAP2C-201ENST00000304465 LOC389332A0A1B0GUA5 103 aa11.13□□□□□ -0.63
SRGAP2C-201ENST00000304465 PRSS29PA6NIE9 313 aa11.13□□□□□ -0.63
SRGAP2C-201ENST00000304465 Q6ZR54 194 aa11.13□□□□□ -0.63
SRGAP2C-201ENST00000304465 C20orf78Q9BR46 151 aa11.13□□□□□ -0.63
SRGAP2C-201ENST00000304465 H3BNG1 76 aa11.12□□□□□ -0.63
SRGAP2C-201ENST00000304465 LINC00614P0C842 121 aa11.12□□□□□ -0.63
SRGAP2C-201ENST00000304465 POLR2KP53803 58 aaKnown RBP11.12□□□□□ -0.63
SRGAP2C-201ENST00000304465 SUMO2P61956 95 aaKnown RBP11.12□□□□□ -0.63
SRGAP2C-201ENST00000304465 PDZD11Q5EBL8 140 aa11.12□□□□□ -0.63
SRGAP2C-201ENST00000304465 C1orf134Q5TEV5 83 aa11.12□□□□□ -0.63
SRGAP2C-201ENST00000304465 MAP1LC3AQ9H492 121 aa11.12□□□□□ -0.63
SRGAP2C-201ENST00000304465 LINC00588Q9Y4M8 146 aa11.12□□□□□ -0.63
SRGAP2C-201ENST00000304465 RTL8CO15255 209 aa11.12□□□□□ -0.63
SRGAP2C-201ENST00000304465 PPP1R17O96001 155 aa11.12□□□□□ -0.63
SRGAP2C-201ENST00000304465 RPL32P62910 135 aaKnown RBP11.12□□□□□ -0.63
SRGAP2C-201ENST00000304465 FHL2Q14192 279 aa11.12□□□□□ -0.63
SRGAP2C-201ENST00000304465 ZNRF2Q8NHG8 242 aa11.12□□□□□ -0.63
SRGAP2C-201ENST00000304465 CHCHD1Q96BP2 118 aaKnown RBP11.12□□□□□ -0.63
SRGAP2C-201ENST00000304465 NIT2Q9NQR4 276 aa11.12□□□□□ -0.63
SRGAP2C-201ENST00000304465 CIDEAO60543 219 aa11.11□□□□□ -0.63
SRGAP2C-201ENST00000304465 RNASEKQ6P5S7 137 aaKnown RBP11.11□□□□□ -0.63
SRGAP2C-201ENST00000304465 Q8N8P6 123 aa11.11□□□□□ -0.63
SRGAP2C-201ENST00000304465 PRSS3P2Q8NHM4 247 aa11.11□□□□□ -0.63
SRGAP2C-201ENST00000304465 HIST1H2BLQ99880 126 aa11.11□□□□□ -0.63
SRGAP2C-201ENST00000304465 SMIM2Q9BVW6 85 aa11.11□□□□□ -0.63
SRGAP2C-201ENST00000304465 VPS13DQ5THJ4 4388 aa11.11□□□□□ -0.63
SRGAP2C-201ENST00000304465 TMEM70Q9BUB7 260 aa11.1□□□□□ -0.63
SRGAP2C-201ENST00000304465 NXT2Q9NPJ8 142 aaKnown RBP11.1□□□□□ -0.63
SRGAP2C-201ENST00000304465 A0A096LNJ9 63 aa11.09□□□□□ -0.63
SRGAP2C-201ENST00000304465 NBDYA0A0U1RRE5 68 aa11.09□□□□□ -0.63
SRGAP2C-201ENST00000304465 SLC25A29Q8N8R3 303 aa11.09□□□□□ -0.63
SRGAP2C-201ENST00000304465 NEXN-AS1Q8NBZ9 246 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms