RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 MORN3Q6PF18 240 aaPredicted RBP10.58□□□□□ -0.72
SHCBP1-201ENST00000303383 PMCHL2Q9BQD1 86 aa10.58□□□□□ -0.72
SHCBP1-201ENST00000303383 LINC00467Q9BRT7 94 aa10.58□□□□□ -0.72
SHCBP1-201ENST00000303383 CRYGDP07320 174 aa10.57□□□□□ -0.72
SHCBP1-201ENST00000303383 LINC00315P59091 139 aa10.57□□□□□ -0.72
SHCBP1-201ENST00000303383 C1orf158Q8N1D5 194 aa10.57□□□□□ -0.72
SHCBP1-201ENST00000303383 KIR2DL4Q99706 377 aa10.57□□□□□ -0.72
SHCBP1-201ENST00000303383 MRPL16Q9NX20 251 aaKnown RBP10.57□□□□□ -0.72
SHCBP1-201ENST00000303383 TEP1Q99973 2627 aaKnown RBP10.57□□□□□ -0.72
SHCBP1-201ENST00000303383 IGLV2-18A0A075B6J9 118 aa10.57□□□□□ -0.72
SHCBP1-201ENST00000303383 UBE2V1Q13404 147 aa10.57□□□□□ -0.72
SHCBP1-201ENST00000303383 C19orf73Q9NVV2 129 aa10.56□□□□□ -0.72
SHCBP1-201ENST00000303383 AZU1P20160 251 aa10.56□□□□□ -0.72
SHCBP1-201ENST00000303383 POM121L12Q8N7R1 296 aa10.56□□□□□ -0.72
SHCBP1-201ENST00000303383 TRAV9-2A0A087WT02 112 aa10.56□□□□□ -0.72
SHCBP1-201ENST00000303383 TRGV1A0A0A0MS02 117 aa10.56□□□□□ -0.72
SHCBP1-201ENST00000303383 VCYO14598 125 aa10.56□□□□□ -0.72
SHCBP1-201ENST00000303383 ATP5LO75964 103 aa10.56□□□□□ -0.72
SHCBP1-201ENST00000303383 COL5A1-AS1Q5SY13 56 aa10.56□□□□□ -0.72
SHCBP1-201ENST00000303383 NEGR1Q7Z3B1 354 aa10.56□□□□□ -0.72
SHCBP1-201ENST00000303383 SPATA12Q7Z6I5 190 aa10.56□□□□□ -0.72
SHCBP1-201ENST00000303383 MRPL52Q86TS9 123 aaKnown RBP10.56□□□□□ -0.72
SHCBP1-201ENST00000303383 SDHAF1A6NFY7 115 aa10.55□□□□□ -0.72
SHCBP1-201ENST00000303383 LINC01546A6NGU7 62 aa10.55□□□□□ -0.72
SHCBP1-201ENST00000303383 KIR2DL5BA0A0G2JN68 375 aa10.55□□□□□ -0.72
SHCBP1-201ENST00000303383 KIR2DL5BA0A0G2JPC4 375 aa10.55□□□□□ -0.72
SHCBP1-201ENST00000303383 K7EMI3 77 aa10.55□□□□□ -0.72
SHCBP1-201ENST00000303383 KIR2DL5AQ8N109 375 aa10.55□□□□□ -0.72
SHCBP1-201ENST00000303383 OR4C5Q8NGB2 326 aa10.55□□□□□ -0.72
SHCBP1-201ENST00000303383 C11orf72Q8NBR9 251 aa10.54□□□□□ -0.72
SHCBP1-201ENST00000303383 RRN3P1Q2M238 152 aa10.54□□□□□ -0.72
SHCBP1-201ENST00000303383 C3orf56Q8N813 242 aa10.54□□□□□ -0.72
SHCBP1-201ENST00000303383 DEFB104AQ8WTQ1 72 aa10.54□□□□□ -0.72
SHCBP1-201ENST00000303383 TMEM263Q8WUH6 116 aaKnown RBP10.54□□□□□ -0.72
SHCBP1-201ENST00000303383 CST9LQ9H4G1 147 aa10.54□□□□□ -0.72
SHCBP1-201ENST00000303383 RHODO00212 210 aa10.54□□□□□ -0.72
SHCBP1-201ENST00000303383 Q6ZN92 141 aa10.54□□□□□ -0.72
SHCBP1-201ENST00000303383 BOD1L2Q8IYS8 172 aa10.54□□□□□ -0.72
SHCBP1-201ENST00000303383 M0QY20 66 aa10.53□□□□□ -0.72
SHCBP1-201ENST00000303383 PIK3CD-AS1Q5SR53 167 aa10.53□□□□□ -0.72
SHCBP1-201ENST00000303383 LINC01545Q5VT33 79 aa10.53□□□□□ -0.72
SHCBP1-201ENST00000303383 ORAOV1Q8WV07 137 aa10.53□□□□□ -0.72
SHCBP1-201ENST00000303383 SCGB3A1Q96QR1 104 aa10.53□□□□□ -0.72
SHCBP1-201ENST00000303383 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.53□□□□□ -0.72
SHCBP1-201ENST00000303383 TNFRSF18Q9Y5U5 241 aa10.53□□□□□ -0.72
SHCBP1-201ENST00000303383 SPATA3Q8NHX4 192 aa10.52□□□□□ -0.72
SHCBP1-201ENST00000303383 IGLL1P15814 213 aa10.52□□□□□ -0.73
SHCBP1-201ENST00000303383 LGALS9BQ3B8N2 356 aa10.52□□□□□ -0.73
SHCBP1-201ENST00000303383 KRTAP24-1Q3LI83 254 aa10.52□□□□□ -0.73
SHCBP1-201ENST00000303383 CFAP126Q5VTH2 177 aa10.52□□□□□ -0.73
SHCBP1-201ENST00000303383 LGALS9CQ6DKI2 356 aa10.52□□□□□ -0.73
SHCBP1-201ENST00000303383 C16orf74Q96GX8 76 aa10.52□□□□□ -0.73
SHCBP1-201ENST00000303383 hDV102S1A0JD36 115 aa10.51□□□□□ -0.73
SHCBP1-201ENST00000303383 C2orf66Q6UXQ4 117 aa10.51□□□□□ -0.73
SHCBP1-201ENST00000303383 PTH2Q96A98 100 aa10.51□□□□□ -0.73
SHCBP1-201ENST00000303383 NOP10Q9NPE3 64 aaKnown RBP10.51□□□□□ -0.73
SHCBP1-201ENST00000303383 MIEN1Q9BRT3 115 aa10.51□□□□□ -0.73
SHCBP1-201ENST00000303383 CYSLTR1Q9Y271 337 aa10.51□□□□□ -0.73
SHCBP1-201ENST00000303383 TENM1Q9UKZ4 2725 aa10.51□□□□□ -0.73
SHCBP1-201ENST00000303383 TRBV6-5A0A0K0K1A5 114 aa10.5□□□□□ -0.73
SHCBP1-201ENST00000303383 POLR2KP53803 58 aaKnown RBP10.5□□□□□ -0.73
SHCBP1-201ENST00000303383 RPL32P62910 135 aaKnown RBP10.5□□□□□ -0.73
SHCBP1-201ENST00000303383 GIG44P09565 113 aaPredicted RBP10.5□□□□□ -0.73
SHCBP1-201ENST00000303383 C12orf54Q6X4T0 127 aa10.5□□□□□ -0.73
SHCBP1-201ENST00000303383 UQCR10Q9UDW1 63 aa10.5□□□□□ -0.73
SHCBP1-201ENST00000303383 TRGV2A0A075B6R0 118 aa10.49□□□□□ -0.73
SHCBP1-201ENST00000303383 EMP1P54849 157 aa10.49□□□□□ -0.73
SHCBP1-201ENST00000303383 I3L3M4 83 aa10.49□□□□□ -0.73
SHCBP1-201ENST00000303383 K7ERU9 68 aa10.49□□□□□ -0.73
SHCBP1-201ENST00000303383 IGHV3-53P01767 116 aa10.49□□□□□ -0.73
SHCBP1-201ENST00000303383 ZFP2Q6ZN57 461 aa10.49□□□□□ -0.73
SHCBP1-201ENST00000303383 TOMM6Q96B49 74 aa10.49□□□□□ -0.73
SHCBP1-201ENST00000303383 TRBV27A0A0K0K1C4 114 aa10.48□□□□□ -0.73
SHCBP1-201ENST00000303383 P0DMU3 169 aa10.48□□□□□ -0.73
SHCBP1-201ENST00000303383 FAM231AP0DMU4 169 aa10.48□□□□□ -0.73
SHCBP1-201ENST00000303383 FAM231CP0DMU5 169 aa10.48□□□□□ -0.73
SHCBP1-201ENST00000303383 Q6ZTI0 123 aa10.48□□□□□ -0.73
SHCBP1-201ENST00000303383 NACAE9PAV3 2078 aa10.48□□□□□ -0.73
SHCBP1-201ENST00000303383 LINC01549A6NIU2 74 aa10.48□□□□□ -0.73
SHCBP1-201ENST00000303383 RS1O15537 224 aa10.48□□□□□ -0.73
SHCBP1-201ENST00000303383 TP53TG1Q9Y2A0 90 aa10.48□□□□□ -0.73
SHCBP1-201ENST00000303383 DKK2Q9UBU2 259 aa10.47□□□□□ -0.73
SHCBP1-201ENST00000303383 GAGE12BA1L429 117 aa10.47□□□□□ -0.73
SHCBP1-201ENST00000303383 GAGE7O76087 117 aa10.47□□□□□ -0.73
SHCBP1-201ENST00000303383 GAGE12FP0CL80 117 aa10.47□□□□□ -0.73
SHCBP1-201ENST00000303383 GAGE12GP0CL81 117 aa10.47□□□□□ -0.73
SHCBP1-201ENST00000303383 GAGE12IP0CL82 117 aa10.47□□□□□ -0.73
SHCBP1-201ENST00000303383 IGLC3P0DOY3 106 aa10.47□□□□□ -0.73
SHCBP1-201ENST00000303383 HNRNPA3P51991 378 aaKnown RBP10.47□□□□□ -0.73
SHCBP1-201ENST00000303383 WFDC9Q8NEX5 89 aa10.47□□□□□ -0.73
SHCBP1-201ENST00000303383 SIVA1O15304 175 aa10.46□□□□□ -0.73
SHCBP1-201ENST00000303383 CYSRT1A8MQ03 144 aa10.46□□□□□ -0.73
SHCBP1-201ENST00000303383 CSNK1G2-AS1Q8NCQ2 148 aa10.46□□□□□ -0.73
SHCBP1-201ENST00000303383 APOC4P55056 127 aa10.46□□□□□ -0.74
SHCBP1-201ENST00000303383 DAZ2Q13117 558 aaKnown RBP10.46□□□□□ -0.74
SHCBP1-201ENST00000303383 ERASQ7Z444 233 aa10.46□□□□□ -0.74
SHCBP1-201ENST00000303383 VWFP04275 2813 aa10.46□□□□□ -0.74
SHCBP1-201ENST00000303383 TCTAP57738 103 aa10.45□□□□□ -0.74
SHCBP1-201ENST00000303383 Q6ZVH6 145 aa10.45□□□□□ -0.74
SHCBP1-201ENST00000303383 DPM2O94777 84 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms