RNA–Protein interactions for RNA: ENST00000301480.4

ZNF560-201, Transcript of zinc finger protein 560, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF560, Length 2,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-201ENST00000301480 ZNF706Q9Y5V0 76 aaPredicted RBP3.44□□□□□ -1.86
ZNF560-201ENST00000301480 ATRQ13535 2644 aa3.44□□□□□ -1.86
ZNF560-201ENST00000301480 FBN1P35555 2871 aaKnown RBP3.43□□□□□ -1.86
ZNF560-201ENST00000301480 TEX49A0A1B0GTD5 131 aa3.43□□□□□ -1.86
ZNF560-201ENST00000301480 ZNF503-AS2A6NEH8 195 aa3.43□□□□□ -1.86
ZNF560-201ENST00000301480 SLC25A20O43772 301 aa3.43□□□□□ -1.86
ZNF560-201ENST00000301480 SMIM11AP58511 58 aa3.43□□□□□ -1.86
ZNF560-201ENST00000301480 MRPS36P82909 103 aaKnown RBP3.43□□□□□ -1.86
ZNF560-201ENST00000301480 RPL18Q07020 188 aaKnown RBP3.43□□□□□ -1.86
ZNF560-201ENST00000301480 RBMY1FQ15415 496 aaKnown RBP3.43□□□□□ -1.86
ZNF560-201ENST00000301480 GDF5OSQ5U4N7 250 aa3.43□□□□□ -1.86
ZNF560-201ENST00000301480 CCL13Q99616 98 aa3.43□□□□□ -1.86
ZNF560-201ENST00000301480 SLC50A1Q9BRV3 221 aa3.43□□□□□ -1.86
ZNF560-201ENST00000301480 HEATR1Q9H583 2144 aaKnown RBP3.43□□□□□ -1.86
ZNF560-201ENST00000301480 FAM30AQ9NZY2 134 aa3.43□□□□□ -1.86
ZNF560-201ENST00000301480 ARFGEF3Q5TH69 2177 aa3.43□□□□□ -1.86
ZNF560-201ENST00000301480 MXRA5Q9NR99 2828 aa3.43□□□□□ -1.86
ZNF560-201ENST00000301480 CADP27708 2225 aa3.43□□□□□ -1.86
ZNF560-201ENST00000301480 IGHV3OR15-7A0A075B7D8 119 aa3.43□□□□□ -1.86
ZNF560-201ENST00000301480 IGHV1-24A0A0C4DH33 117 aa3.43□□□□□ -1.86
ZNF560-201ENST00000301480 LOC107984156A0A0G2JMH3 177 aa3.43□□□□□ -1.86
ZNF560-201ENST00000301480 CRYM-AS1A6NIL9 109 aa3.43□□□□□ -1.86
ZNF560-201ENST00000301480 C15orf62A8K5M9 175 aa3.43□□□□□ -1.86
ZNF560-201ENST00000301480 LY6HO94772 140 aa3.43□□□□□ -1.86
ZNF560-201ENST00000301480 IGHV1-46P01743 117 aa3.43□□□□□ -1.86
ZNF560-201ENST00000301480 IL4P05112 153 aa3.43□□□□□ -1.86
ZNF560-201ENST00000301480 RPL30P62888 115 aaKnown RBP3.43□□□□□ -1.86
ZNF560-201ENST00000301480 C6orf99Q4VX62 202 aa3.43□□□□□ -1.86
ZNF560-201ENST00000301480 ARL17AQ8IVW1 177 aa3.43□□□□□ -1.86
ZNF560-201ENST00000301480 Q8N8P6 123 aa3.43□□□□□ -1.86
ZNF560-201ENST00000301480 KLF14Q8TD94 323 aaPredicted RBP3.43□□□□□ -1.86
ZNF560-201ENST00000301480 PLA2G12AQ9BZM1 189 aa3.43□□□□□ -1.86
ZNF560-201ENST00000301480 C7orf69Q9H7B7 122 aa3.43□□□□□ -1.86
ZNF560-201ENST00000301480 ZNF492Q9P255 531 aa3.43□□□□□ -1.86
ZNF560-201ENST00000301480 ROS1P08922 2347 aa3.43□□□□□ -1.86
ZNF560-201ENST00000301480 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.43□□□□□ -1.86
ZNF560-201ENST00000301480 PLCE1Q9P212 2302 aa3.43□□□□□ -1.86
ZNF560-201ENST00000301480 IGKV1-9A0A0C4DH69 117 aa3.42□□□□□ -1.86
ZNF560-201ENST00000301480 LOC389332A0A1B0GUA5 103 aa3.42□□□□□ -1.86
ZNF560-201ENST00000301480 ZNF32P17041 273 aa3.42□□□□□ -1.86
ZNF560-201ENST00000301480 UBE2D3P61077 147 aa3.42□□□□□ -1.86
ZNF560-201ENST00000301480 UBE2D2P62837 147 aa3.42□□□□□ -1.86
ZNF560-201ENST00000301480 RIGQ13278 110 aa3.42□□□□□ -1.86
ZNF560-201ENST00000301480 FAM104BQ5XKR9 115 aa3.42□□□□□ -1.86
ZNF560-201ENST00000301480 GVQW1Q8N7I0 195 aa3.42□□□□□ -1.86
ZNF560-201ENST00000301480 IL36BQ9NZH7 164 aa3.42□□□□□ -1.86
ZNF560-201ENST00000301480 CPSF4LA6NMK7 179 aaKnown RBP3.42□□□□□ -1.86
ZNF560-201ENST00000301480 BUB1B-PAK6H3BSN5 160 aa3.42□□□□□ -1.86
ZNF560-201ENST00000301480 ZNF22P17026 224 aaPredicted RBP3.42□□□□□ -1.86
ZNF560-201ENST00000301480 FXYD6P3P58550 94 aa3.42□□□□□ -1.86
ZNF560-201ENST00000301480 MAP6D1Q9H9H5 199 aa3.42□□□□□ -1.86
ZNF560-201ENST00000301480 STAB1Q9NY15 2570 aa3.42□□□□□ -1.86
ZNF560-201ENST00000301480 SONP18583 2426 aaKnown RBP3.42□□□□□ -1.86
ZNF560-201ENST00000301480 TLN2Q9Y4G6 2542 aa3.42□□□□□ -1.86
ZNF560-201ENST00000301480 MYMXA0A1B0GTQ4 84 aa3.41□□□□□ -1.86
ZNF560-201ENST00000301480 ADARB2-AS1A8MUL3 147 aa3.41□□□□□ -1.86
ZNF560-201ENST00000301480 IQCF6A8MYZ5 107 aa3.41□□□□□ -1.86
ZNF560-201ENST00000301480 TRIAP1O43715 76 aa3.41□□□□□ -1.86
ZNF560-201ENST00000301480 NXPH4O95158 308 aa3.41□□□□□ -1.86
ZNF560-201ENST00000301480 IGKV1-16P04430 117 aa3.41□□□□□ -1.86
ZNF560-201ENST00000301480 KRTAP27-1Q3LI81 207 aa3.41□□□□□ -1.86
ZNF560-201ENST00000301480 SFTA2Q6UW10 78 aa3.41□□□□□ -1.86
ZNF560-201ENST00000301480 DEFB108BQ8NET1 73 aa3.41□□□□□ -1.86
ZNF560-201ENST00000301480 ITLN1Q8WWA0 313 aa3.41□□□□□ -1.86
ZNF560-201ENST00000301480 LINC01600Q96MT4 127 aa3.41□□□□□ -1.86
ZNF560-201ENST00000301480 PRR14LQ5THK1 2151 aa3.41□□□□□ -1.86
ZNF560-201ENST00000301480 A0A0G2JRQ6 117 aa3.41□□□□□ -1.86
ZNF560-201ENST00000301480 K7EQD1 137 aa3.41□□□□□ -1.86
ZNF560-201ENST00000301480 NPYP01303 97 aa3.41□□□□□ -1.86
ZNF560-201ENST00000301480 HMGA2P52926 109 aa3.41□□□□□ -1.86
ZNF560-201ENST00000301480 ZNF876PQ49A33 203 aa3.41□□□□□ -1.86
ZNF560-201ENST00000301480 LINC00643Q86TS7 51 aa3.41□□□□□ -1.86
ZNF560-201ENST00000301480 KRTAP19-1Q8IUB9 90 aa3.41□□□□□ -1.86
ZNF560-201ENST00000301480 NKAPP1Q8N9T2 125 aa3.41□□□□□ -1.86
ZNF560-201ENST00000301480 TOMM6Q96B49 74 aa3.41□□□□□ -1.86
ZNF560-201ENST00000301480 TRGV9Q99603 122 aa3.41□□□□□ -1.86
ZNF560-201ENST00000301480 ZANQ9Y493 2812 aa3.41□□□□□ -1.86
ZNF560-201ENST00000301480 RTTNQ86VV8 2226 aa3.41□□□□□ -1.86
ZNF560-201ENST00000301480 SRRM5B3KS81 715 aa3.4□□□□□ -1.86
ZNF560-201ENST00000301480 IGKV1-5P01602 117 aa3.4□□□□□ -1.86
ZNF560-201ENST00000301480 HBDP02042 147 aa3.4□□□□□ -1.86
ZNF560-201ENST00000301480 AQP1P29972 269 aa3.4□□□□□ -1.86
ZNF560-201ENST00000301480 PRR3P79522 188 aaKnown RBP3.4□□□□□ -1.86
ZNF560-201ENST00000301480 HOXA4Q00056 320 aaPredicted RBP3.4□□□□□ -1.86
ZNF560-201ENST00000301480 SOSTDC1Q6X4U4 206 aa3.4□□□□□ -1.86
ZNF560-201ENST00000301480 GPHB5Q86YW7 130 aa3.4□□□□□ -1.86
ZNF560-201ENST00000301480 URB1-AS1Q96HZ7 61 aa3.4□□□□□ -1.86
ZNF560-201ENST00000301480 AGRNO00468 2067 aa3.4□□□□□ -1.87
ZNF560-201ENST00000301480 A0A0J9YXV3 536 aa3.4□□□□□ -1.87
ZNF560-201ENST00000301480 LYNX1G3V0Z9 82 aa3.4□□□□□ -1.87
ZNF560-201ENST00000301480 H7BZZ5 65 aa3.4□□□□□ -1.87
ZNF560-201ENST00000301480 LYNX1P0DP58 116 aa3.4□□□□□ -1.87
ZNF560-201ENST00000301480 PRB4P10163 310 aaPredicted RBP3.4□□□□□ -1.87
ZNF560-201ENST00000301480 Q6P435 159 aa3.4□□□□□ -1.87
ZNF560-201ENST00000301480 C1orf229Q6ZS94 237 aaPredicted RBP3.4□□□□□ -1.87
ZNF560-201ENST00000301480 ZNF714Q96N38 554 aa3.4□□□□□ -1.87
ZNF560-201ENST00000301480 OPRPNQ99935 248 aaPredicted RBP3.4□□□□□ -1.87
ZNF560-201ENST00000301480 KAAG1Q9UBP8 84 aa3.4□□□□□ -1.87
ZNF560-201ENST00000301480 DOCK11Q5JSL3 2073 aa3.39□□□□□ -1.87
ZNF560-201ENST00000301480 TRBV25-1A0A075B6N4 114 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms