RNA–Protein interactions for RNA: ENST00000300853.7

ERCC1-202, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC1, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-202ENST00000300853 SPTBN4Q9H254 2564 aa9□□□□□ -0.97
ERCC1-202ENST00000300853 M0QXV9 152 aa9□□□□□ -0.97
ERCC1-202ENST00000300853 Q6Q795 121 aa9□□□□□ -0.97
ERCC1-202ENST00000300853 TSPEAR-AS2P59090 65 aa8.99□□□□□ -0.97
ERCC1-202ENST00000300853 UBE2L6O14933 153 aa8.99□□□□□ -0.97
ERCC1-202ENST00000300853 PRR9Q5T870 116 aa8.99□□□□□ -0.97
ERCC1-202ENST00000300853 SPANXDQ9BXN6 97 aa8.99□□□□□ -0.97
ERCC1-202ENST00000300853 COX8CQ7Z4L0 72 aa8.98□□□□□ -0.97
ERCC1-202ENST00000300853 MOB4Q9Y3A3 225 aa8.98□□□□□ -0.97
ERCC1-202ENST00000300853 TRBV30A0A0K0K1B3 111 aa8.98□□□□□ -0.97
ERCC1-202ENST00000300853 HERVK_113P63121 156 aa8.98□□□□□ -0.97
ERCC1-202ENST00000300853 ZNRF2Q8NHG8 242 aa8.98□□□□□ -0.97
ERCC1-202ENST00000300853 TMEM263Q8WUH6 116 aaKnown RBP8.98□□□□□ -0.97
ERCC1-202ENST00000300853 IGHV3-38A0A0C4DH36 116 aa8.98□□□□□ -0.97
ERCC1-202ENST00000300853 ZNF22P17026 224 aaPredicted RBP8.98□□□□□ -0.97
ERCC1-202ENST00000300853 PRR30Q53SZ7 412 aaPredicted RBP8.98□□□□□ -0.97
ERCC1-202ENST00000300853 Q8N9W7 124 aa8.98□□□□□ -0.97
ERCC1-202ENST00000300853 LINC00643Q86TS7 51 aa8.97□□□□□ -0.97
ERCC1-202ENST00000300853 IGKV3D-7A0A0C4DH55 119 aa8.97□□□□□ -0.97
ERCC1-202ENST00000300853 FAM223BA6NKX1 122 aa8.97□□□□□ -0.97
ERCC1-202ENST00000300853 UQCRQO14949 82 aa8.97□□□□□ -0.97
ERCC1-202ENST00000300853 IGFL2Q6UWQ7 119 aa8.97□□□□□ -0.97
ERCC1-202ENST00000300853 FAM223AQ8IWN6 122 aa8.97□□□□□ -0.97
ERCC1-202ENST00000300853 DAZ1Q9NQZ3 744 aaKnown RBP8.97□□□□□ -0.97
ERCC1-202ENST00000300853 MSRB2Q9Y3D2 182 aa8.97□□□□□ -0.97
ERCC1-202ENST00000300853 A0A1B0GX51 115 aa8.96□□□□□ -0.97
ERCC1-202ENST00000300853 HOXD3P31249 432 aaPredicted RBP8.96□□□□□ -0.97
ERCC1-202ENST00000300853 IGHV1OR15-1A0A075B7D0 117 aa8.96□□□□□ -0.98
ERCC1-202ENST00000300853 TMEM223A0PJW6 202 aa8.96□□□□□ -0.98
ERCC1-202ENST00000300853 LINC00694P0DN24 101 aa8.96□□□□□ -0.98
ERCC1-202ENST00000300853 LINC00158P58513 81 aa8.96□□□□□ -0.98
ERCC1-202ENST00000300853 BRD3OSQ6XYD6 125 aa8.96□□□□□ -0.98
ERCC1-202ENST00000300853 C3orf22Q8N5N4 141 aa8.96□□□□□ -0.98
ERCC1-202ENST00000300853 C20orf203Q8NBC4 194 aa8.96□□□□□ -0.98
ERCC1-202ENST00000300853 ZFAND3Q9H8U3 227 aa8.96□□□□□ -0.98
ERCC1-202ENST00000300853 Q9H8V8 135 aa8.96□□□□□ -0.98
ERCC1-202ENST00000300853 IGHV4-4A0A075B6R2 117 aa8.96□□□□□ -0.98
ERCC1-202ENST00000300853 H7C423 109 aa8.96□□□□□ -0.98
ERCC1-202ENST00000300853 SYNJ2BPP57105 145 aa8.96□□□□□ -0.98
ERCC1-202ENST00000300853 CEMP1Q6PRD7 247 aaPredicted RBP8.96□□□□□ -0.98
ERCC1-202ENST00000300853 ZFAND2AQ8N6M9 145 aa8.96□□□□□ -0.98
ERCC1-202ENST00000300853 PPDPFQ9H3Y8 114 aa8.96□□□□□ -0.98
ERCC1-202ENST00000300853 PEMTQ9UBM1 199 aa8.96□□□□□ -0.98
ERCC1-202ENST00000300853 TLN1Q9Y490 2541 aaKnown RBP8.95□□□□□ -0.98
ERCC1-202ENST00000300853 NDUFA4O00483 81 aa8.95□□□□□ -0.98
ERCC1-202ENST00000300853 NDUFA7O95182 113 aa8.95□□□□□ -0.98
ERCC1-202ENST00000300853 CCDC140Q96MF4 163 aa8.95□□□□□ -0.98
ERCC1-202ENST00000300853 LINC01587Q99440 93 aa8.95□□□□□ -0.98
ERCC1-202ENST00000300853 RAI1Q7Z5J4 1906 aaPredicted RBP8.95□□□□□ -0.98
ERCC1-202ENST00000300853 IGLV4-69A0A075B6H9 119 aa8.95□□□□□ -0.98
ERCC1-202ENST00000300853 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.95□□□□□ -0.98
ERCC1-202ENST00000300853 IGKV2-29A2NJV5 120 aaPredicted RBP8.95□□□□□ -0.98
ERCC1-202ENST00000300853 LINC01546A6NGU7 62 aa8.95□□□□□ -0.98
ERCC1-202ENST00000300853 ATOX1O00244 68 aa8.95□□□□□ -0.98
ERCC1-202ENST00000300853 C5orf47Q569G3 176 aa8.95□□□□□ -0.98
ERCC1-202ENST00000300853 MED14OSP0DP75 135 aa8.95□□□□□ -0.98
ERCC1-202ENST00000300853 C20orf173Q96LM9 149 aa8.95□□□□□ -0.98
ERCC1-202ENST00000300853 LAMA5O15230 3695 aa8.95□□□□□ -0.98
ERCC1-202ENST00000300853 IGHV1-69P01742 117 aa8.94□□□□□ -0.98
ERCC1-202ENST00000300853 COX6B1P14854 86 aa8.94□□□□□ -0.98
ERCC1-202ENST00000300853 IGHV3-16A0A0C4DH30 117 aa8.94□□□□□ -0.98
ERCC1-202ENST00000300853 IGIPA6NJ69 53 aa8.94□□□□□ -0.98
ERCC1-202ENST00000300853 MIAQ16674 131 aa8.94□□□□□ -0.98
ERCC1-202ENST00000300853 UNQ9165/PRO28630Q6UXU0 137 aa8.94□□□□□ -0.98
ERCC1-202ENST00000300853 COL12A1Q99715 3063 aa8.94□□□□□ -0.98
ERCC1-202ENST00000300853 TECTAO75443 2155 aa8.93□□□□□ -0.98
ERCC1-202ENST00000300853 IGHV1-58A0A0C4DH39 117 aa8.93□□□□□ -0.98
ERCC1-202ENST00000300853 F8W735 103 aaPredicted RBP8.93□□□□□ -0.98
ERCC1-202ENST00000300853 LY6LH3BQJ8 138 aa8.93□□□□□ -0.98
ERCC1-202ENST00000300853 ODF3Q96PU9 254 aa8.93□□□□□ -0.98
ERCC1-202ENST00000300853 VPREB3Q9UKI3 123 aa8.93□□□□□ -0.98
ERCC1-202ENST00000300853 PAX4O43316 350 aa8.93□□□□□ -0.98
ERCC1-202ENST00000300853 DYNLRB2Q8TF09 96 aa8.93□□□□□ -0.98
ERCC1-202ENST00000300853 PSMG3-AS1Q96PY0 264 aa8.93□□□□□ -0.98
ERCC1-202ENST00000300853 PRRC2AP48634 2157 aaKnown RBP8.93□□□□□ -0.98
ERCC1-202ENST00000300853 TINCRA0A1B0GVN0 87 aa8.93□□□□□ -0.98
ERCC1-202ENST00000300853 hADV29S1A0JD25 119 aa8.93□□□□□ -0.98
ERCC1-202ENST00000300853 RBMY1BA6NDE4 496 aaKnown RBP8.92□□□□□ -0.98
ERCC1-202ENST00000300853 RBMY1EA6NEQ0 496 aaKnown RBP8.92□□□□□ -0.98
ERCC1-202ENST00000300853 RBMY1DP0C7P1 496 aaKnown RBP8.92□□□□□ -0.98
ERCC1-202ENST00000300853 NHLRC4P0CG21 123 aaPredicted RBP8.92□□□□□ -0.98
ERCC1-202ENST00000300853 RBMY1A1P0DJD3 496 aaKnown RBP8.92□□□□□ -0.98
ERCC1-202ENST00000300853 RBMY1CP0DJD4 496 aa8.92□□□□□ -0.98
ERCC1-202ENST00000300853 USMG5Q96IX5 58 aa8.92□□□□□ -0.98
ERCC1-202ENST00000300853 MDFICQ9P1T7 246 aa8.92□□□□□ -0.98
ERCC1-202ENST00000300853 A8MZ25 164 aa8.92□□□□□ -0.98
ERCC1-202ENST00000300853 POLR2KP53803 58 aaKnown RBP8.92□□□□□ -0.98
ERCC1-202ENST00000300853 DAZ2Q13117 558 aaKnown RBP8.92□□□□□ -0.98
ERCC1-202ENST00000300853 Q6ZSV7 163 aa8.92□□□□□ -0.98
ERCC1-202ENST00000300853 DAZ4Q86SG3 579 aaKnown RBP8.92□□□□□ -0.98
ERCC1-202ENST00000300853 DAZ3Q9NR90 486 aaKnown RBP8.92□□□□□ -0.98
ERCC1-202ENST00000300853 CRYGDP07320 174 aa8.92□□□□□ -0.98
ERCC1-202ENST00000300853 RNASE3P12724 160 aaKnown RBP8.92□□□□□ -0.98
ERCC1-202ENST00000300853 LST1O00453 97 aa8.91□□□□□ -0.98
ERCC1-202ENST00000300853 SOCS3O14543 225 aa8.91□□□□□ -0.98
ERCC1-202ENST00000300853 ZFHX4Q86UP3 3567 aa8.91□□□□□ -0.98
ERCC1-202ENST00000300853 IGLV4-3A0A075B6K6 122 aa8.91□□□□□ -0.98
ERCC1-202ENST00000300853 IGFL3Q6UXB1 125 aa8.91□□□□□ -0.98
ERCC1-202ENST00000300853 DNAJC30Q96LL9 226 aa8.91□□□□□ -0.98
ERCC1-202ENST00000300853 NOTCH2Q04721 2471 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms