RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 IGHV3OR16-10A0A075B7F0 116 aa8.23□□□□□ -1.09
SNX20-201ENST00000300590 A0A0U1RRA0 63 aa8.23□□□□□ -1.09
SNX20-201ENST00000300590 H7C423 109 aa8.23□□□□□ -1.09
SNX20-201ENST00000300590 NPFFO15130 113 aa8.23□□□□□ -1.09
SNX20-201ENST00000300590 PPP1R17O96001 155 aa8.23□□□□□ -1.09
SNX20-201ENST00000300590 POLR2KP53803 58 aaKnown RBP8.23□□□□□ -1.09
SNX20-201ENST00000300590 IGHV1-69DA0A0B4J2H0 117 aa8.22□□□□□ -1.09
SNX20-201ENST00000300590 LY6G5BQ8NDX9 201 aa8.22□□□□□ -1.09
SNX20-201ENST00000300590 TMEM141Q96I45 108 aa8.22□□□□□ -1.09
SNX20-201ENST00000300590 TMEM101Q96IK0 257 aa8.22□□□□□ -1.09
SNX20-201ENST00000300590 CEP295Q9C0D2 2601 aa8.22□□□□□ -1.09
SNX20-201ENST00000300590 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.22□□□□□ -1.09
SNX20-201ENST00000300590 SMIM9A6NGZ8 99 aa8.22□□□□□ -1.09
SNX20-201ENST00000300590 CEMP1Q6PRD7 247 aaPredicted RBP8.22□□□□□ -1.09
SNX20-201ENST00000300590 C9orf139Q6ZV77 190 aa8.22□□□□□ -1.09
SNX20-201ENST00000300590 NRGNQ92686 78 aa8.22□□□□□ -1.09
SNX20-201ENST00000300590 A0A0J9YXY3 114 aa8.21□□□□□ -1.09
SNX20-201ENST00000300590 M0R2P5 195 aa8.21□□□□□ -1.09
SNX20-201ENST00000300590 LEPROTO15243 131 aa8.21□□□□□ -1.09
SNX20-201ENST00000300590 Q6Q795 121 aa8.21□□□□□ -1.09
SNX20-201ENST00000300590 A0A0B4J2C4 111 aa8.21□□□□□ -1.1
SNX20-201ENST00000300590 TMEM223A0PJW6 202 aa8.21□□□□□ -1.1
SNX20-201ENST00000300590 ODF3BA8MYP8 253 aa8.21□□□□□ -1.1
SNX20-201ENST00000300590 P0DMU3 169 aa8.21□□□□□ -1.1
SNX20-201ENST00000300590 FAM231AP0DMU4 169 aa8.21□□□□□ -1.1
SNX20-201ENST00000300590 FAM231CP0DMU5 169 aa8.21□□□□□ -1.1
SNX20-201ENST00000300590 HTN1P15515 57 aa8.21□□□□□ -1.1
SNX20-201ENST00000300590 LINC00315P59091 139 aa8.21□□□□□ -1.1
SNX20-201ENST00000300590 HERVK_113P63121 156 aa8.21□□□□□ -1.1
SNX20-201ENST00000300590 ICOSQ9Y6W8 199 aa8.21□□□□□ -1.1
SNX20-201ENST00000300590 ZFHX3Q15911 3703 aa8.21□□□□□ -1.1
SNX20-201ENST00000300590 IGHV3-73A0A0B4J1V6 119 aa8.21□□□□□ -1.1
SNX20-201ENST00000300590 COX6CP09669 75 aa8.21□□□□□ -1.1
SNX20-201ENST00000300590 FAM19A5Q7Z5A7 132 aaPredicted RBP8.21□□□□□ -1.1
SNX20-201ENST00000300590 DUX5Q96PT3 197 aa8.21□□□□□ -1.1
SNX20-201ENST00000300590 TIMM17AQ99595 171 aa8.21□□□□□ -1.1
SNX20-201ENST00000300590 ATRXP46100 2492 aa8.21□□□□□ -1.1
SNX20-201ENST00000300590 ADAMTSL4-AS1Q5T5F5 129 aa8.2□□□□□ -1.1
SNX20-201ENST00000300590 Q8N6K4 173 aa8.2□□□□□ -1.1
SNX20-201ENST00000300590 DNAJC30Q96LL9 226 aa8.2□□□□□ -1.1
SNX20-201ENST00000300590 TRAV12-2A0A075B6T6 113 aa8.2□□□□□ -1.1
SNX20-201ENST00000300590 MRPL53Q96EL3 112 aaKnown RBP8.2□□□□□ -1.1
SNX20-201ENST00000300590 IGHV3-30-3P0DP02 117 aa8.19□□□□□ -1.1
SNX20-201ENST00000300590 ZFP36P26651 326 aaKnown RBP8.19□□□□□ -1.1
SNX20-201ENST00000300590 IGFL3Q6UXB1 125 aa8.19□□□□□ -1.1
SNX20-201ENST00000300590 PIP4P1Q86T03 277 aa8.19□□□□□ -1.1
SNX20-201ENST00000300590 KIF25-AS1Q9Y6Z4 181 aa8.19□□□□□ -1.1
SNX20-201ENST00000300590 LINC01587Q99440 93 aa8.19□□□□□ -1.1
SNX20-201ENST00000300590 MDFICQ9P1T7 246 aa8.19□□□□□ -1.1
SNX20-201ENST00000300590 J3KT08 172 aa8.19□□□□□ -1.1
SNX20-201ENST00000300590 OVOL1O14753 267 aa8.19□□□□□ -1.1
SNX20-201ENST00000300590 OR13C6PQ8NH95 151 aa8.19□□□□□ -1.1
SNX20-201ENST00000300590 ITLN2Q8WWU7 325 aaPredicted RBP8.19□□□□□ -1.1
SNX20-201ENST00000300590 TIMM21Q9BVV7 248 aa8.19□□□□□ -1.1
SNX20-201ENST00000300590 SPG11Q96JI7 2443 aa8.19□□□□□ -1.1
SNX20-201ENST00000300590 TRBV30A0A0K0K1B3 111 aa8.18□□□□□ -1.1
SNX20-201ENST00000300590 NDUFA7O95182 113 aa8.18□□□□□ -1.1
SNX20-201ENST00000300590 GAGE2AQ6NT46 116 aa8.18□□□□□ -1.1
SNX20-201ENST00000300590 ZNF625Q96I27 306 aaPredicted RBP8.18□□□□□ -1.1
SNX20-201ENST00000300590 M0R1W7 72 aa8.18□□□□□ -1.1
SNX20-201ENST00000300590 RS1O15537 224 aa8.18□□□□□ -1.1
SNX20-201ENST00000300590 KLK9Q9UKQ9 250 aa8.18□□□□□ -1.1
SNX20-201ENST00000300590 LENEPQ9Y5L5 61 aa8.18□□□□□ -1.1
SNX20-201ENST00000300590 IGHV4OR15-8A0A075B7B6 117 aa8.17□□□□□ -1.1
SNX20-201ENST00000300590 A0A087WW49 117 aa8.17□□□□□ -1.1
SNX20-201ENST00000300590 TRBV7-1A0A0A6YYK4 115 aa8.17□□□□□ -1.1
SNX20-201ENST00000300590 TRAV41A0A0B4J266 112 aa8.17□□□□□ -1.1
SNX20-201ENST00000300590 EDN2P20800 178 aa8.17□□□□□ -1.1
SNX20-201ENST00000300590 SAA4P35542 130 aa8.17□□□□□ -1.1
SNX20-201ENST00000300590 NDUFA12Q9UI09 145 aa8.17□□□□□ -1.1
SNX20-201ENST00000300590 I3L3M4 83 aa8.17□□□□□ -1.1
SNX20-201ENST00000300590 CD28P10747 220 aa8.17□□□□□ -1.1
SNX20-201ENST00000300590 KLRB1Q12918 225 aa8.17□□□□□ -1.1
SNX20-201ENST00000300590 CSPG4Q6UVK1 2322 aa8.17□□□□□ -1.1
SNX20-201ENST00000300590 U3KQE9 123 aa8.16□□□□□ -1.1
SNX20-201ENST00000300590 MINOS1Q5TGZ0 78 aa8.16□□□□□ -1.1
SNX20-201ENST00000300590 CUBNO60494 3623 aa8.16□□□□□ -1.1
SNX20-201ENST00000300590 TRBV27A0A0K0K1C4 114 aa8.16□□□□□ -1.1
SNX20-201ENST00000300590 IGLV4-3A0A075B6K6 122 aa8.15□□□□□ -1.1
SNX20-201ENST00000300590 RHPN1-AS1Q9BWJ2 59 aa8.15□□□□□ -1.1
SNX20-201ENST00000300590 HRNRQ86YZ3 2850 aaPredicted RBP8.15□□□□□ -1.1
SNX20-201ENST00000300590 EBI3Q14213 229 aa8.15□□□□□ -1.1
SNX20-201ENST00000300590 C3orf22Q8N5N4 141 aa8.15□□□□□ -1.1
SNX20-201ENST00000300590 BSNQ9UPA5 3926 aa8.15□□□□□ -1.11
SNX20-201ENST00000300590 C20orf203Q8NBC4 194 aa8.14□□□□□ -1.11
SNX20-201ENST00000300590 LY6EQ16553 131 aa8.14□□□□□ -1.11
SNX20-201ENST00000300590 PTPRQQ9UMZ3 2332 aa8.14□□□□□ -1.11
SNX20-201ENST00000300590 M0QY20 66 aa8.14□□□□□ -1.11
SNX20-201ENST00000300590 DEFB123Q8N688 67 aa8.14□□□□□ -1.11
SNX20-201ENST00000300590 MINOS1-NBL1R4GNA1 71 aa8.14□□□□□ -1.11
SNX20-201ENST00000300590 KNCNA6PVL3 124 aa8.13□□□□□ -1.11
SNX20-201ENST00000300590 H3BT86 120 aa8.13□□□□□ -1.11
SNX20-201ENST00000300590 PROK1P58294 105 aa8.13□□□□□ -1.11
SNX20-201ENST00000300590 TRAV25A0A0B4J276 109 aa8.13□□□□□ -1.11
SNX20-201ENST00000300590 LITAFQ99732 161 aa8.13□□□□□ -1.11
SNX20-201ENST00000300590 hADV29S1A0JD25 119 aa8.12□□□□□ -1.11
SNX20-201ENST00000300590 LST1O00453 97 aa8.12□□□□□ -1.11
SNX20-201ENST00000300590 UQCRQO14949 82 aa8.12□□□□□ -1.11
SNX20-201ENST00000300590 SOCS3O14543 225 aa8.12□□□□□ -1.11
SNX20-201ENST00000300590 PRM2P04554 102 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms