RNA–Protein interactions for RNA: ENST00000299238.6

HPS6-201, Transcript of HPS6, biogenesis of lysosomal organelles complex 2 subunit 3, humanhuman

APPRIS P1 BASIC

Gene HPS6, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6-201ENST00000299238 TRAV2A0A0B4J234 112 aa15.11■□□□□ 0.01
HPS6-201ENST00000299238 TRAV12-1A0A0B4J245 112 aa15.11■□□□□ 0.01
HPS6-201ENST00000299238 A0A0J9YY99 117 aa15.11■□□□□ 0.01
HPS6-201ENST00000299238 M0R381 172 aa15.11■□□□□ 0.01
HPS6-201ENST00000299238 EMP1P54849 157 aa15.11■□□□□ 0.01
HPS6-201ENST00000299238 C5orf47Q569G3 176 aa15.11■□□□□ 0.01
HPS6-201ENST00000299238 USP9YO00507 2555 aaPredicted RBP15.1■□□□□ 0.01
HPS6-201ENST00000299238 NEXN-AS1Q8NBZ9 246 aa15.1■□□□□ 0.01
HPS6-201ENST00000299238 SCGB3A1Q96QR1 104 aa15.1■□□□□ 0.01
HPS6-201ENST00000299238 PRO1854Q9UHT4 67 aa15.1■□□□□ 0.01
HPS6-201ENST00000299238 EIF4EBP3O60516 100 aaPredicted RBP15.1■□□□□ 0.01
HPS6-201ENST00000299238 LINC00477Q96M19 166 aa15.1■□□□□ 0.01
HPS6-201ENST00000299238 USP24Q9UPU5 2620 aa15.09■□□□□ 0.01
HPS6-201ENST00000299238 DSCR9P59020 149 aa15.09■□□□□ 0.01
HPS6-201ENST00000299238 POLQO75417 2590 aa15.09■□□□□ 0.01
HPS6-201ENST00000299238 IGHV3-30P01768 117 aa15.09■□□□□ 0.01
HPS6-201ENST00000299238 IGHV3-30-5P0DP03 117 aa15.09■□□□□ 0.01
HPS6-201ENST00000299238 DOPEY2Q9Y3R5 2298 aa15.08■□□□□ 0.01
HPS6-201ENST00000299238 IGLV1-40P01703 118 aa15.08■□□□□ 0
HPS6-201ENST00000299238 OVOL1O14753 267 aa15.07■□□□□ 0
HPS6-201ENST00000299238 PRB1P04280 392 aa15.07■□□□□ 0
HPS6-201ENST00000299238 EDN2P20800 178 aa15.07■□□□□ 0
HPS6-201ENST00000299238 ZNF56Q15929 161 aa15.07■□□□□ 0
HPS6-201ENST00000299238 KLK5Q9Y337 293 aaPredicted RBP15.07■□□□□ 0
HPS6-201ENST00000299238 ZFYVE26Q68DK2 2539 aa15.07■□□□□ 0
HPS6-201ENST00000299238 ANKRD17O75179 2603 aaKnown RBP15.07■□□□□ 0
HPS6-201ENST00000299238 CFHR3Q02985 330 aa15.06■□□□□ 0
HPS6-201ENST00000299238 BAALCQ8WXS3 180 aa15.06■□□□□ 0
HPS6-201ENST00000299238 DNAJC30Q96LL9 226 aa15.06■□□□□ 0
HPS6-201ENST00000299238 FAM19A4Q96LR4 140 aa15.06■□□□□ 0
HPS6-201ENST00000299238 DUSP14O95147 198 aaKnown RBP15.05■□□□□ 0
HPS6-201ENST00000299238 S100A4P26447 101 aaKnown RBP15.05■□□□□ 0
HPS6-201ENST00000299238 BEX4Q9NWD9 120 aaPredicted RBP15.05■□□□□ 0
HPS6-201ENST00000299238 TSPEAR-AS2P59090 65 aa15.05■□□□□ -0
HPS6-201ENST00000299238 C14orf178Q8N769 122 aaPredicted RBP15.05■□□□□ -0
HPS6-201ENST00000299238 TRAV21A0A0B4J279 112 aa15.04■□□□□ -0
HPS6-201ENST00000299238 SMIM9A6NGZ8 99 aa15.04■□□□□ -0
HPS6-201ENST00000299238 RNASE4P34096 147 aaKnown RBP15.04■□□□□ -0
HPS6-201ENST00000299238 DEFB104AQ8WTQ1 72 aa15.04■□□□□ -0
HPS6-201ENST00000299238 RPL39LQ96EH5 51 aaKnown RBP15.04■□□□□ -0
HPS6-201ENST00000299238 SPANXA1Q9NS26 97 aa15.04■□□□□ -0
HPS6-201ENST00000299238 LINC01620Q4KN68 170 aa15.04■□□□□ -0
HPS6-201ENST00000299238 CEMP1Q6PRD7 247 aaPredicted RBP15.04■□□□□ -0
HPS6-201ENST00000299238 LINC01356Q8N9X3 169 aa15.04■□□□□ -0
HPS6-201ENST00000299238 ZNF462Q96JM2 2506 aa15.03■□□□□ -0
HPS6-201ENST00000299238 LGALS9O00182 355 aa15.03■□□□□ -0
HPS6-201ENST00000299238 IGHV4-59P01825 116 aa15.03■□□□□ -0
HPS6-201ENST00000299238 DEFB112Q30KQ8 113 aa15.03■□□□□ -0
HPS6-201ENST00000299238 FBN2P35556 2912 aa15.03■□□□□ -0
HPS6-201ENST00000299238 CREBBPQ92793 2442 aa15.03■□□□□ -0
HPS6-201ENST00000299238 GNRH2O43555 120 aa15.03■□□□□ -0
HPS6-201ENST00000299238 APRG1Q8IVJ8 170 aa15.03■□□□□ -0
HPS6-201ENST00000299238 A0A096LNT2 108 aa15.02■□□□□ -0
HPS6-201ENST00000299238 A4D1N5 150 aa15.02■□□□□ -0
HPS6-201ENST00000299238 SPXQ9BT56 116 aa15.02■□□□□ -0
HPS6-201ENST00000299238 RHPN1-AS1Q9BWJ2 59 aa15.02■□□□□ -0
HPS6-201ENST00000299238 SORL1Q92673 2214 aa15.02■□□□□ -0
HPS6-201ENST00000299238 IGHV3-33P01772 117 aa15.02□□□□□ -0.01
HPS6-201ENST00000299238 FAM19A5Q7Z5A7 132 aaPredicted RBP15.02□□□□□ -0.01
HPS6-201ENST00000299238 FAM208BQ5VWN6 2430 aa15.01□□□□□ -0.01
HPS6-201ENST00000299238 H3BMM0 161 aa15.01□□□□□ -0.01
HPS6-201ENST00000299238 MGPP08493 103 aa15.01□□□□□ -0.01
HPS6-201ENST00000299238 UBE2WQ96B02 151 aa15.01□□□□□ -0.01
HPS6-201ENST00000299238 DUX3Q96PT4 197 aa15.01□□□□□ -0.01
HPS6-201ENST00000299238 SMIM2Q9BVW6 85 aa15.01□□□□□ -0.01
HPS6-201ENST00000299238 DAZ1Q9NQZ3 744 aaKnown RBP15.01□□□□□ -0.01
HPS6-201ENST00000299238 PHLDA3Q9Y5J5 127 aa15.01□□□□□ -0.01
HPS6-201ENST00000299238 FAM236AA0A1B0GUQ0 79 aa15.01□□□□□ -0.01
HPS6-201ENST00000299238 FAM236BA0A1B0GV22 79 aa15.01□□□□□ -0.01
HPS6-201ENST00000299238 C11orf86A6NJI1 115 aa15.01□□□□□ -0.01
HPS6-201ENST00000299238 TOMM6Q96B49 74 aa15.01□□□□□ -0.01
HPS6-201ENST00000299238 RPL13AP40429 203 aaKnown RBP15□□□□□ -0.01
HPS6-201ENST00000299238 MAPK1IP1LQ8NDC0 245 aa15□□□□□ -0.01
HPS6-201ENST00000299238 BBC3Q96PG8 261 aaPredicted RBP15□□□□□ -0.01
HPS6-201ENST00000299238 ZNF580Q9UK33 172 aa15□□□□□ -0.01
HPS6-201ENST00000299238 LRRK2Q5S007 2527 aa15□□□□□ -0.01
HPS6-201ENST00000299238 C9orf153Q5TBE3 101 aa14.99□□□□□ -0.01
HPS6-201ENST00000299238 SLC25A29Q8N8R3 303 aa14.99□□□□□ -0.01
HPS6-201ENST00000299238 MUC4Q99102 2169 aa14.99□□□□□ -0.01
HPS6-201ENST00000299238 TRGV11A0A075B6L2 103 aa14.99□□□□□ -0.01
HPS6-201ENST00000299238 MED14OSP0DP75 135 aa14.98□□□□□ -0.01
HPS6-201ENST00000299238 Q1RN00 199 aa14.98□□□□□ -0.01
HPS6-201ENST00000299238 C2orf66Q6UXQ4 117 aa14.98□□□□□ -0.01
HPS6-201ENST00000299238 UBR5O95071 2799 aaPredicted RBP14.98□□□□□ -0.01
HPS6-201ENST00000299238 CRYGDP07320 174 aa14.98□□□□□ -0.01
HPS6-201ENST00000299238 PSMB8P28062 276 aa14.98□□□□□ -0.01
HPS6-201ENST00000299238 DPH3P1Q9H4G8 78 aa14.98□□□□□ -0.01
HPS6-201ENST00000299238 RNASE3P12724 160 aaKnown RBP14.97□□□□□ -0.01
HPS6-201ENST00000299238 ZNF22P17026 224 aaPredicted RBP14.97□□□□□ -0.01
HPS6-201ENST00000299238 SUMO2P61956 95 aaKnown RBP14.97□□□□□ -0.01
HPS6-201ENST00000299238 HERVK_113P63121 156 aa14.97□□□□□ -0.01
HPS6-201ENST00000299238 TMEM263Q8WUH6 116 aaKnown RBP14.97□□□□□ -0.01
HPS6-201ENST00000299238 NDUFA7O95182 113 aa14.97□□□□□ -0.01
HPS6-201ENST00000299238 J3QLI3 93 aa14.96□□□□□ -0.01
HPS6-201ENST00000299238 ATXN8Q156A1 80 aa14.96□□□□□ -0.01
HPS6-201ENST00000299238 C10orf99Q6UWK7 81 aa14.96□□□□□ -0.01
HPS6-201ENST00000299238 CUBNO60494 3623 aa14.96□□□□□ -0.01
HPS6-201ENST00000299238 RNF223E7ERA6 249 aa14.96□□□□□ -0.01
HPS6-201ENST00000299238 M0R2P5 195 aa14.96□□□□□ -0.01
HPS6-201ENST00000299238 MXRA5Q9NR99 2828 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms