RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 SERF1AO75920 110 aa14.9□□□□□ -0.02
SMCO4-201ENST00000298966 MIFP14174 115 aa14.9□□□□□ -0.02
SMCO4-201ENST00000298966 S100A2P29034 98 aa14.9□□□□□ -0.02
SMCO4-201ENST00000298966 LINC00310P59036 64 aa14.9□□□□□ -0.02
SMCO4-201ENST00000298966 C14orf178Q8N769 122 aaPredicted RBP14.9□□□□□ -0.02
SMCO4-201ENST00000298966 KIF25-AS1Q9Y6Z4 181 aa14.9□□□□□ -0.02
SMCO4-201ENST00000298966 X6R8D5 127 aa14.9□□□□□ -0.02
SMCO4-201ENST00000298966 IFITM10A6NMD0 228 aa14.89□□□□□ -0.03
SMCO4-201ENST00000298966 RTL8CO15255 209 aa14.89□□□□□ -0.03
SMCO4-201ENST00000298966 KRTAP4-5Q9BYR2 181 aa14.89□□□□□ -0.03
SMCO4-201ENST00000298966 IQCJQ1A5X6 159 aa14.88□□□□□ -0.03
SMCO4-201ENST00000298966 Q8NAQ8 132 aa14.88□□□□□ -0.03
SMCO4-201ENST00000298966 PLAC8L1A1L4L8 177 aa14.87□□□□□ -0.03
SMCO4-201ENST00000298966 ZFP2Q6ZN57 461 aa14.87□□□□□ -0.03
SMCO4-201ENST00000298966 Q6ZTC4 211 aa14.87□□□□□ -0.03
SMCO4-201ENST00000298966 PACRGQ96M98 296 aaPredicted RBP14.87□□□□□ -0.03
SMCO4-201ENST00000298966 M0R2N4 97 aa14.86□□□□□ -0.03
SMCO4-201ENST00000298966 RS1O15537 224 aa14.86□□□□□ -0.03
SMCO4-201ENST00000298966 PRM2P04554 102 aa14.86□□□□□ -0.03
SMCO4-201ENST00000298966 CRYGDP07320 174 aa14.86□□□□□ -0.03
SMCO4-201ENST00000298966 PDZD11Q5EBL8 140 aa14.86□□□□□ -0.03
SMCO4-201ENST00000298966 TMEM18Q96B42 140 aa14.86□□□□□ -0.03
SMCO4-201ENST00000298966 CHCHD1Q96BP2 118 aaKnown RBP14.86□□□□□ -0.03
SMCO4-201ENST00000298966 HIST1H2BLQ99880 126 aa14.86□□□□□ -0.03
SMCO4-201ENST00000298966 IGHV4-28A0A0C4DH34 117 aa14.85□□□□□ -0.03
SMCO4-201ENST00000298966 H7C1H1 209 aa14.85□□□□□ -0.03
SMCO4-201ENST00000298966 NUPR1O60356 82 aa14.85□□□□□ -0.03
SMCO4-201ENST00000298966 MGPP08493 103 aa14.85□□□□□ -0.03
SMCO4-201ENST00000298966 P0DMU3 169 aa14.85□□□□□ -0.03
SMCO4-201ENST00000298966 FAM231AP0DMU4 169 aa14.85□□□□□ -0.03
SMCO4-201ENST00000298966 FAM231CP0DMU5 169 aa14.85□□□□□ -0.03
SMCO4-201ENST00000298966 LINC00315P59091 139 aa14.85□□□□□ -0.03
SMCO4-201ENST00000298966 C18orf15Q96N68 181 aa14.85□□□□□ -0.03
SMCO4-201ENST00000298966 TRGV1A0A0A0MS02 117 aa14.84□□□□□ -0.03
SMCO4-201ENST00000298966 TRAV4A0A0B4J268 109 aa14.84□□□□□ -0.03
SMCO4-201ENST00000298966 TEX48A0A1B0GUV7 120 aa14.84□□□□□ -0.03
SMCO4-201ENST00000298966 LYRM9A8MSI8 78 aa14.84□□□□□ -0.03
SMCO4-201ENST00000298966 SMKR1H3BMG3 65 aa14.84□□□□□ -0.03
SMCO4-201ENST00000298966 NCR2O95944 276 aa14.84□□□□□ -0.03
SMCO4-201ENST00000298966 NPYP01303 97 aa14.84□□□□□ -0.03
SMCO4-201ENST00000298966 NIT1Q86X76 327 aa14.84□□□□□ -0.03
SMCO4-201ENST00000298966 NOP10Q9NPE3 64 aaKnown RBP14.84□□□□□ -0.03
SMCO4-201ENST00000298966 MRPL16Q9NX20 251 aaKnown RBP14.84□□□□□ -0.03
SMCO4-201ENST00000298966 NACAE9PAV3 2078 aa14.83□□□□□ -0.03
SMCO4-201ENST00000298966 HSPG2P98160 4391 aa14.83□□□□□ -0.04
SMCO4-201ENST00000298966 PRSS47A8MTI9 375 aa14.83□□□□□ -0.04
SMCO4-201ENST00000298966 TNFRSF6BO95407 300 aa14.83□□□□□ -0.04
SMCO4-201ENST00000298966 AKR1D1P51857 326 aa14.83□□□□□ -0.04
SMCO4-201ENST00000298966 CFAP126Q5VTH2 177 aa14.83□□□□□ -0.04
SMCO4-201ENST00000298966 MAP1LC3AQ9H492 121 aa14.83□□□□□ -0.04
SMCO4-201ENST00000298966 A0A087WWL8 130 aa14.82□□□□□ -0.04
SMCO4-201ENST00000298966 F5H697 171 aa14.82□□□□□ -0.04
SMCO4-201ENST00000298966 FABP4P15090 132 aa14.82□□□□□ -0.04
SMCO4-201ENST00000298966 ZNF56Q15929 161 aa14.82□□□□□ -0.04
SMCO4-201ENST00000298966 FAM74A4Q5TZK3 123 aa14.82□□□□□ -0.04
SMCO4-201ENST00000298966 RNASEKQ6P5S7 137 aaKnown RBP14.82□□□□□ -0.04
SMCO4-201ENST00000298966 LINC00612Q8N6U2 182 aa14.82□□□□□ -0.04
SMCO4-201ENST00000298966 NRACQ8N912 160 aa14.82□□□□□ -0.04
SMCO4-201ENST00000298966 URB1-AS1Q96HZ7 61 aa14.82□□□□□ -0.04
SMCO4-201ENST00000298966 C20orf78Q9BR46 151 aa14.82□□□□□ -0.04
SMCO4-201ENST00000298966 JPT2Q9H910 190 aa14.82□□□□□ -0.04
SMCO4-201ENST00000298966 HSBP1O75506 76 aa14.81□□□□□ -0.04
SMCO4-201ENST00000298966 LINC00614P0C842 121 aa14.81□□□□□ -0.04
SMCO4-201ENST00000298966 PMCHP20382 165 aa14.81□□□□□ -0.04
SMCO4-201ENST00000298966 UFSP1Q6NVU6 142 aa14.81□□□□□ -0.04
SMCO4-201ENST00000298966 OR4C5Q8NGB2 326 aa14.81□□□□□ -0.04
SMCO4-201ENST00000298966 SUMO4Q6EEV6 95 aa14.8□□□□□ -0.04
SMCO4-201ENST00000298966 Q6ZTI0 123 aa14.8□□□□□ -0.04
SMCO4-201ENST00000298966 PRSS3P2Q8NHM4 247 aa14.8□□□□□ -0.04
SMCO4-201ENST00000298966 SAMD10Q9BYL1 202 aa14.8□□□□□ -0.04
SMCO4-201ENST00000298966 NXT2Q9NPJ8 142 aaKnown RBP14.8□□□□□ -0.04
SMCO4-201ENST00000298966 DEFB131BA0A096LNP1 70 aa14.79□□□□□ -0.04
SMCO4-201ENST00000298966 TRAV26-2A0A0B4J265 109 aa14.79□□□□□ -0.04
SMCO4-201ENST00000298966 RPL32P62910 135 aaKnown RBP14.79□□□□□ -0.04
SMCO4-201ENST00000298966 FA2HQ7L5A8 372 aa14.79□□□□□ -0.04
SMCO4-201ENST00000298966 TRGV2A0A075B6R0 118 aa14.78□□□□□ -0.04
SMCO4-201ENST00000298966 TRBV6-5A0A0K0K1A5 114 aa14.78□□□□□ -0.04
SMCO4-201ENST00000298966 K7EMI3 77 aa14.78□□□□□ -0.04
SMCO4-201ENST00000298966 GAS8-AS1O95177 125 aa14.78□□□□□ -0.04
SMCO4-201ENST00000298966 GATA1P15976 413 aaPredicted RBP14.78□□□□□ -0.04
SMCO4-201ENST00000298966 OR10D4PQ8NGN7 298 aa14.78□□□□□ -0.04
SMCO4-201ENST00000298966 LINC01546A6NGU7 62 aa14.77□□□□□ -0.05
SMCO4-201ENST00000298966 M0QY20 66 aa14.77□□□□□ -0.05
SMCO4-201ENST00000298966 IGHV3-53P01767 116 aa14.77□□□□□ -0.05
SMCO4-201ENST00000298966 AMTP48728 403 aa14.77□□□□□ -0.05
SMCO4-201ENST00000298966 AP5S1Q9NUS5 200 aa14.77□□□□□ -0.05
SMCO4-201ENST00000298966 IFI27P40305 119 aaPredicted RBP14.76□□□□□ -0.05
SMCO4-201ENST00000298966 SUMO2P61956 95 aaKnown RBP14.76□□□□□ -0.05
SMCO4-201ENST00000298966 DNAJC30Q96LL9 226 aa14.76□□□□□ -0.05
SMCO4-201ENST00000298966 NIT2Q9NQR4 276 aa14.76□□□□□ -0.05
SMCO4-201ENST00000298966 LOC389332A0A1B0GUA5 103 aa14.75□□□□□ -0.05
SMCO4-201ENST00000298966 GAGE12BA1L429 117 aa14.75□□□□□ -0.05
SMCO4-201ENST00000298966 GAGE7O76087 117 aa14.75□□□□□ -0.05
SMCO4-201ENST00000298966 GAGE12FP0CL80 117 aa14.75□□□□□ -0.05
SMCO4-201ENST00000298966 GAGE12GP0CL81 117 aa14.75□□□□□ -0.05
SMCO4-201ENST00000298966 GAGE12IP0CL82 117 aa14.75□□□□□ -0.05
SMCO4-201ENST00000298966 SPART-AS1P0CW21 52 aa14.75□□□□□ -0.05
SMCO4-201ENST00000298966 EMP1P54849 157 aa14.75□□□□□ -0.05
SMCO4-201ENST00000298966 Q8N8P6 123 aa14.75□□□□□ -0.05
SMCO4-201ENST00000298966 ST20Q9HBF5 79 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 241.3 ms