RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 NOTCH1P46531 2555 aa13.21□□□□□ -0.29
SEC61A2-201ENST00000298428 TRBV6-5A0A0K0K1A5 114 aa13.21□□□□□ -0.3
SEC61A2-201ENST00000298428 LINC01546A6NGU7 62 aa13.21□□□□□ -0.3
SEC61A2-201ENST00000298428 Q6ZSN1 163 aa13.21□□□□□ -0.3
SEC61A2-201ENST00000298428 Q8NAQ8 132 aa13.21□□□□□ -0.3
SEC61A2-201ENST00000298428 NIT2Q9NQR4 276 aa13.21□□□□□ -0.3
SEC61A2-201ENST00000298428 DEFB4AO15263 64 aa13.19□□□□□ -0.3
SEC61A2-201ENST00000298428 P0DMU3 169 aa13.19□□□□□ -0.3
SEC61A2-201ENST00000298428 FAM231AP0DMU4 169 aa13.19□□□□□ -0.3
SEC61A2-201ENST00000298428 FAM231CP0DMU5 169 aa13.19□□□□□ -0.3
SEC61A2-201ENST00000298428 TMEM70Q9BUB7 260 aa13.19□□□□□ -0.3
SEC61A2-201ENST00000298428 TP53TG1Q9Y2A0 90 aa13.19□□□□□ -0.3
SEC61A2-201ENST00000298428 MGAM2Q2M2H8 2515 aa13.19□□□□□ -0.3
SEC61A2-201ENST00000298428 SDHAF1A6NFY7 115 aa13.19□□□□□ -0.3
SEC61A2-201ENST00000298428 DEFB130BP0DP73 79 aa13.19□□□□□ -0.3
SEC61A2-201ENST00000298428 DEFB130AP0DP74 79 aa13.19□□□□□ -0.3
SEC61A2-201ENST00000298428 RPL32P62910 135 aaKnown RBP13.19□□□□□ -0.3
SEC61A2-201ENST00000298428 LINC00612Q8N6U2 182 aa13.19□□□□□ -0.3
SEC61A2-201ENST00000298428 LYRM9A8MSI8 78 aa13.18□□□□□ -0.3
SEC61A2-201ENST00000298428 TCAPO15273 167 aa13.18□□□□□ -0.3
SEC61A2-201ENST00000298428 POLR2KP53803 58 aaKnown RBP13.18□□□□□ -0.3
SEC61A2-201ENST00000298428 FAM222AQ5U5X8 452 aa13.18□□□□□ -0.3
SEC61A2-201ENST00000298428 NBEAL1Q6ZS30 2694 aa13.18□□□□□ -0.3
SEC61A2-201ENST00000298428 K7EIL1 84 aa13.17□□□□□ -0.3
SEC61A2-201ENST00000298428 CIDEAO60543 219 aa13.17□□□□□ -0.3
SEC61A2-201ENST00000298428 NEGR1Q7Z3B1 354 aa13.17□□□□□ -0.3
SEC61A2-201ENST00000298428 RETNQ9HD89 108 aa13.17□□□□□ -0.3
SEC61A2-201ENST00000298428 A0A096LNJ9 63 aa13.16□□□□□ -0.3
SEC61A2-201ENST00000298428 LEPROTL1O95214 131 aa13.16□□□□□ -0.3
SEC61A2-201ENST00000298428 LAGE3Q14657 143 aa13.16□□□□□ -0.3
SEC61A2-201ENST00000298428 VCYO14598 125 aa13.16□□□□□ -0.3
SEC61A2-201ENST00000298428 HBDP02042 147 aa13.16□□□□□ -0.3
SEC61A2-201ENST00000298428 C18orf15Q96N68 181 aa13.16□□□□□ -0.3
SEC61A2-201ENST00000298428 DKK2Q9UBU2 259 aa13.16□□□□□ -0.3
SEC61A2-201ENST00000298428 TRBV27A0A0K0K1C4 114 aa13.15□□□□□ -0.3
SEC61A2-201ENST00000298428 K7EMI3 77 aa13.15□□□□□ -0.3
SEC61A2-201ENST00000298428 NEXN-AS1Q8NBZ9 246 aa13.15□□□□□ -0.3
SEC61A2-201ENST00000298428 TNFRSF18Q9Y5U5 241 aa13.15□□□□□ -0.3
SEC61A2-201ENST00000298428 K7EQD1 137 aa13.14□□□□□ -0.31
SEC61A2-201ENST00000298428 KIR2DL4Q99706 377 aa13.14□□□□□ -0.31
SEC61A2-201ENST00000298428 Q9UF83 564 aa13.14□□□□□ -0.31
SEC61A2-201ENST00000298428 FCER1GP30273 86 aa13.14□□□□□ -0.31
SEC61A2-201ENST00000298428 ORMDL2Q53FV1 153 aa13.14□□□□□ -0.31
SEC61A2-201ENST00000298428 PYY3Q5JQD4 70 aa13.14□□□□□ -0.31
SEC61A2-201ENST00000298428 DNAJC30Q96LL9 226 aa13.14□□□□□ -0.31
SEC61A2-201ENST00000298428 TRGV4A0A0C4DH28 118 aa13.13□□□□□ -0.31
SEC61A2-201ENST00000298428 SMIM6P0DI80 62 aa13.13□□□□□ -0.31
SEC61A2-201ENST00000298428 KRTDAPP60985 99 aa13.13□□□□□ -0.31
SEC61A2-201ENST00000298428 DEFB121Q5J5C9 76 aa13.13□□□□□ -0.31
SEC61A2-201ENST00000298428 SLC25A29Q8N8R3 303 aa13.13□□□□□ -0.31
SEC61A2-201ENST00000298428 LINC00173Q6ZV60 143 aa13.12□□□□□ -0.31
SEC61A2-201ENST00000298428 SBSPONQ8IVN8 264 aa13.12□□□□□ -0.31
SEC61A2-201ENST00000298428 HSPB8Q9UJY1 196 aa13.12□□□□□ -0.31
SEC61A2-201ENST00000298428 CELA1Q9UNI1 258 aa13.12□□□□□ -0.31
SEC61A2-201ENST00000298428 TRBV10-1A0A0K0K1A3 114 aa13.12□□□□□ -0.31
SEC61A2-201ENST00000298428 NUDT3O95989 172 aa13.12□□□□□ -0.31
SEC61A2-201ENST00000298428 BTF3P20290 206 aaKnown RBP13.12□□□□□ -0.31
SEC61A2-201ENST00000298428 FHL2Q14192 279 aa13.12□□□□□ -0.31
SEC61A2-201ENST00000298428 DEFB104AQ8WTQ1 72 aa13.12□□□□□ -0.31
SEC61A2-201ENST00000298428 I3L3M4 83 aa13.11□□□□□ -0.31
SEC61A2-201ENST00000298428 C3orf79P0CE67 100 aa13.11□□□□□ -0.31
SEC61A2-201ENST00000298428 SPART-AS1P0CW21 52 aa13.11□□□□□ -0.31
SEC61A2-201ENST00000298428 JOSD1Q15040 202 aaPredicted RBP13.11□□□□□ -0.31
SEC61A2-201ENST00000298428 TRBV6-4A0A1B0GX49 114 aa13.1□□□□□ -0.31
SEC61A2-201ENST00000298428 DAD1P61803 113 aa13.1□□□□□ -0.31
SEC61A2-201ENST00000298428 KRTAP21-3Q3LHN1 58 aa13.1□□□□□ -0.31
SEC61A2-201ENST00000298428 RPL36AP83881 106 aaKnown RBP13.09□□□□□ -0.31
SEC61A2-201ENST00000298428 LINC00518Q8N0U6 118 aa13.09□□□□□ -0.31
SEC61A2-201ENST00000298428 ZNRF2Q8NHG8 242 aa13.09□□□□□ -0.31
SEC61A2-201ENST00000298428 RPL36ALQ969Q0 106 aaKnown RBP13.09□□□□□ -0.31
SEC61A2-201ENST00000298428 DNHD1Q96M86 4753 aa13.09□□□□□ -0.31
SEC61A2-201ENST00000298428 TRBV7-3A0A075B6L6 115 aa13.08□□□□□ -0.32
SEC61A2-201ENST00000298428 SCGB1D1O95968 90 aa13.08□□□□□ -0.32
SEC61A2-201ENST00000298428 TSHBP01222 138 aa13.08□□□□□ -0.32
SEC61A2-201ENST00000298428 RHOHQ15669 191 aa13.08□□□□□ -0.32
SEC61A2-201ENST00000298428 TEX48A0A1B0GUV7 120 aa13.08□□□□□ -0.32
SEC61A2-201ENST00000298428 MRAPQ8TCY5 172 aa13.08□□□□□ -0.32
SEC61A2-201ENST00000298428 C12orf57Q99622 126 aa13.08□□□□□ -0.32
SEC61A2-201ENST00000298428 MAP1LC3CQ9BXW4 147 aa13.08□□□□□ -0.32
SEC61A2-201ENST00000298428 SPATA25Q9BR10 227 aa13.07□□□□□ -0.32
SEC61A2-201ENST00000298428 C11orf68Q9H3H3 251 aaKnown RBP13.07□□□□□ -0.32
SEC61A2-201ENST00000298428 HHLA3Q9XRX5 114 aa13.07□□□□□ -0.32
SEC61A2-201ENST00000298428 GAGE12JA6NER3 117 aa13.06□□□□□ -0.32
SEC61A2-201ENST00000298428 GAGE1Q13065 139 aa13.06□□□□□ -0.32
SEC61A2-201ENST00000298428 GAGE4Q13068 117 aa13.06□□□□□ -0.32
SEC61A2-201ENST00000298428 GAGE5Q13069 117 aa13.06□□□□□ -0.32
SEC61A2-201ENST00000298428 GAGE13Q4V321 117 aa13.06□□□□□ -0.32
SEC61A2-201ENST00000298428 C2orf66Q6UXQ4 117 aa13.06□□□□□ -0.32
SEC61A2-201ENST00000298428 PHLDA1Q8WV24 401 aaPredicted RBP13.06□□□□□ -0.32
SEC61A2-201ENST00000298428 PRADC1Q9BSG0 188 aa13.06□□□□□ -0.32
SEC61A2-201ENST00000298428 IGHV3-38A0A0C4DH36 116 aa13.06□□□□□ -0.32
SEC61A2-201ENST00000298428 TOMM6Q96B49 74 aa13.06□□□□□ -0.32
SEC61A2-201ENST00000298428 LOC100131303A0A0U1RQF7 123 aa13.05□□□□□ -0.32
SEC61A2-201ENST00000298428 SYS1-DBNDD2H3BUS1 97 aa13.05□□□□□ -0.32
SEC61A2-201ENST00000298428 ATP5G1P05496 136 aa13.05□□□□□ -0.32
SEC61A2-201ENST00000298428 G0S2P27469 103 aa13.05□□□□□ -0.32
SEC61A2-201ENST00000298428 IFI27L1Q96BM0 104 aa13.05□□□□□ -0.32
SEC61A2-201ENST00000298428 TM2D3Q9BRN9 247 aa13.05□□□□□ -0.32
SEC61A2-201ENST00000298428 UBE2D3P61077 147 aa13.04□□□□□ -0.32
SEC61A2-201ENST00000298428 UBE2D2P62837 147 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms