RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 ZNF418Q8TF45 676 aaPredicted RBP6.9□□□□□ -1.31
PRDM9-201ENST00000296682 APOMO95445 188 aa6.89□□□□□ -1.31
PRDM9-201ENST00000296682 ESM1Q9NQ30 184 aa6.89□□□□□ -1.31
PRDM9-201ENST00000296682 ADARB2-AS1A8MUL3 147 aa6.89□□□□□ -1.31
PRDM9-201ENST00000296682 H7C1H1 209 aa6.89□□□□□ -1.31
PRDM9-201ENST00000296682 PF4P02776 101 aa6.89□□□□□ -1.31
PRDM9-201ENST00000296682 Q9UF83 564 aa6.89□□□□□ -1.31
PRDM9-201ENST00000296682 ZNF815PA8K554 130 aa6.89□□□□□ -1.31
PRDM9-201ENST00000296682 PRSS2P07478 247 aa6.89□□□□□ -1.31
PRDM9-201ENST00000296682 FOXI2Q6ZQN5 318 aa6.89□□□□□ -1.31
PRDM9-201ENST00000296682 MAPKAPK5-AS1Q8N8E1 139 aa6.89□□□□□ -1.31
PRDM9-201ENST00000296682 CHAC1Q9BUX1 264 aa6.89□□□□□ -1.31
PRDM9-201ENST00000296682 ADAMTSL5Q6ZMM2 481 aa6.88□□□□□ -1.31
PRDM9-201ENST00000296682 KLLNB2CW77 178 aa6.88□□□□□ -1.31
PRDM9-201ENST00000296682 TRBV25-1A0A075B6N4 114 aa6.88□□□□□ -1.31
PRDM9-201ENST00000296682 NPC2P61916 151 aa6.88□□□□□ -1.31
PRDM9-201ENST00000296682 RPL24P83731 157 aaKnown RBP6.88□□□□□ -1.31
PRDM9-201ENST00000296682 ZFP2Q6ZN57 461 aa6.88□□□□□ -1.31
PRDM9-201ENST00000296682 SPXQ9BT56 116 aa6.88□□□□□ -1.31
PRDM9-201ENST00000296682 VCX2Q9H322 139 aa6.88□□□□□ -1.31
PRDM9-201ENST00000296682 TRGV11A0A075B6L2 103 aa6.87□□□□□ -1.31
PRDM9-201ENST00000296682 TRGV2A0A075B6R0 118 aa6.87□□□□□ -1.31
PRDM9-201ENST00000296682 A0A087WX48 190 aa6.87□□□□□ -1.31
PRDM9-201ENST00000296682 H3BMM0 161 aa6.87□□□□□ -1.31
PRDM9-201ENST00000296682 C2orf91Q6ZV80 131 aa6.87□□□□□ -1.31
PRDM9-201ENST00000296682 TMEM89A2RUT3 159 aa6.87□□□□□ -1.31
PRDM9-201ENST00000296682 F8VRH5 84 aa6.87□□□□□ -1.31
PRDM9-201ENST00000296682 TAX1BP3O14907 124 aa6.87□□□□□ -1.31
PRDM9-201ENST00000296682 FSHBP01225 129 aa6.87□□□□□ -1.31
PRDM9-201ENST00000296682 FXYD2P54710 66 aa6.87□□□□□ -1.31
PRDM9-201ENST00000296682 PRADC1Q9BSG0 188 aa6.87□□□□□ -1.31
PRDM9-201ENST00000296682 MAP6D1Q9H9H5 199 aa6.87□□□□□ -1.31
PRDM9-201ENST00000296682 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.87□□□□□ -1.31
PRDM9-201ENST00000296682 LOC107984156A0A0G2JMH3 177 aa6.87□□□□□ -1.31
PRDM9-201ENST00000296682 IGKV2-29A2NJV5 120 aaPredicted RBP6.87□□□□□ -1.31
PRDM9-201ENST00000296682 DEFB114Q30KQ6 69 aa6.87□□□□□ -1.31
PRDM9-201ENST00000296682 SAMD13Q5VXD3 122 aa6.87□□□□□ -1.31
PRDM9-201ENST00000296682 ARL17AQ8IVW1 177 aa6.87□□□□□ -1.31
PRDM9-201ENST00000296682 VPS25Q9BRG1 176 aa6.87□□□□□ -1.31
PRDM9-201ENST00000296682 ZMAT4Q9H898 229 aa6.87□□□□□ -1.31
PRDM9-201ENST00000296682 AKAP9Q99996 3911 aa6.86□□□□□ -1.31
PRDM9-201ENST00000296682 PPP1R17O96001 155 aa6.86□□□□□ -1.31
PRDM9-201ENST00000296682 SMIM13P0DJ93 91 aa6.86□□□□□ -1.31
PRDM9-201ENST00000296682 RBMY1A1P0DJD3 496 aaKnown RBP6.86□□□□□ -1.31
PRDM9-201ENST00000296682 RBMY1CP0DJD4 496 aa6.86□□□□□ -1.31
PRDM9-201ENST00000296682 PLA2G2AP14555 144 aa6.86□□□□□ -1.31
PRDM9-201ENST00000296682 AZU1P20160 251 aa6.86□□□□□ -1.31
PRDM9-201ENST00000296682 UBE2V1Q13404 147 aa6.86□□□□□ -1.31
PRDM9-201ENST00000296682 RBMY1FQ15415 496 aaKnown RBP6.86□□□□□ -1.31
PRDM9-201ENST00000296682 BAALCQ8WXS3 180 aa6.86□□□□□ -1.31
PRDM9-201ENST00000296682 IGLV2-18A0A075B6J9 118 aa6.86□□□□□ -1.31
PRDM9-201ENST00000296682 HSD52Q0P140 79 aa6.86□□□□□ -1.31
PRDM9-201ENST00000296682 SPAG8Q99932 426 aaPredicted RBP6.86□□□□□ -1.31
PRDM9-201ENST00000296682 C20orf78Q9BR46 151 aa6.86□□□□□ -1.31
PRDM9-201ENST00000296682 MED14OSP0DP75 135 aa6.86□□□□□ -1.31
PRDM9-201ENST00000296682 RRN3P1Q2M238 152 aa6.86□□□□□ -1.31
PRDM9-201ENST00000296682 BOD1L2Q8IYS8 172 aa6.86□□□□□ -1.31
PRDM9-201ENST00000296682 DEFB130BP0DP73 79 aa6.85□□□□□ -1.31
PRDM9-201ENST00000296682 DEFB130AP0DP74 79 aa6.85□□□□□ -1.31
PRDM9-201ENST00000296682 ZNRF2Q8NHG8 242 aa6.85□□□□□ -1.31
PRDM9-201ENST00000296682 LINC01006Q8NI28 216 aa6.85□□□□□ -1.31
PRDM9-201ENST00000296682 HHLA3Q9XRX5 114 aa6.85□□□□□ -1.31
PRDM9-201ENST00000296682 GAGE12BA1L429 117 aa6.85□□□□□ -1.31
PRDM9-201ENST00000296682 GAGE7O76087 117 aa6.85□□□□□ -1.31
PRDM9-201ENST00000296682 GAGE12FP0CL80 117 aa6.85□□□□□ -1.31
PRDM9-201ENST00000296682 GAGE12GP0CL81 117 aa6.85□□□□□ -1.31
PRDM9-201ENST00000296682 GAGE12IP0CL82 117 aa6.85□□□□□ -1.31
PRDM9-201ENST00000296682 HERVK_113P61574 105 aa6.85□□□□□ -1.31
PRDM9-201ENST00000296682 NOP10Q9NPE3 64 aaKnown RBP6.85□□□□□ -1.31
PRDM9-201ENST00000296682 CR1P17927 2039 aa6.85□□□□□ -1.31
PRDM9-201ENST00000296682 C11orf86A6NJI1 115 aa6.85□□□□□ -1.31
PRDM9-201ENST00000296682 NXPH4O95158 308 aa6.85□□□□□ -1.31
PRDM9-201ENST00000296682 INSP01308 110 aa6.85□□□□□ -1.31
PRDM9-201ENST00000296682 HLA-DRB4P13762 266 aa6.85□□□□□ -1.31
PRDM9-201ENST00000296682 PLNP26678 52 aa6.85□□□□□ -1.31
PRDM9-201ENST00000296682 ZNF625Q96I27 306 aaPredicted RBP6.85□□□□□ -1.31
PRDM9-201ENST00000296682 SPCS1Q9Y6A9 102 aa6.85□□□□□ -1.31
PRDM9-201ENST00000296682 HLA-DRB4X5D2U9 266 aa6.85□□□□□ -1.31
PRDM9-201ENST00000296682 A0A0J9YXV3 536 aa6.84□□□□□ -1.31
PRDM9-201ENST00000296682 RBMY1BA6NDE4 496 aaKnown RBP6.84□□□□□ -1.31
PRDM9-201ENST00000296682 RBMY1EA6NEQ0 496 aaKnown RBP6.84□□□□□ -1.31
PRDM9-201ENST00000296682 GAGE12JA6NER3 117 aa6.84□□□□□ -1.31
PRDM9-201ENST00000296682 CRYGDP07320 174 aa6.84□□□□□ -1.31
PRDM9-201ENST00000296682 RBMY1DP0C7P1 496 aaKnown RBP6.84□□□□□ -1.31
PRDM9-201ENST00000296682 LGALS3P17931 250 aaKnown RBP6.84□□□□□ -1.31
PRDM9-201ENST00000296682 ZNF415Q09FC8 603 aa6.84□□□□□ -1.31
PRDM9-201ENST00000296682 GAGE4Q13068 117 aa6.84□□□□□ -1.31
PRDM9-201ENST00000296682 GAGE5Q13069 117 aa6.84□□□□□ -1.31
PRDM9-201ENST00000296682 GAGE13Q4V321 117 aa6.84□□□□□ -1.31
PRDM9-201ENST00000296682 AMTNQ6UX39 209 aa6.84□□□□□ -1.31
PRDM9-201ENST00000296682 C4orf3Q8WVX3 66 aa6.84□□□□□ -1.31
PRDM9-201ENST00000296682 RNASE8Q8TDE3 154 aaKnown RBP6.84□□□□□ -1.31
PRDM9-201ENST00000296682 MAST4O15021 2626 aa6.84□□□□□ -1.32
PRDM9-201ENST00000296682 SCGB1C2P0DMR2 95 aa6.83□□□□□ -1.32
PRDM9-201ENST00000296682 FABP2P12104 132 aa6.83□□□□□ -1.32
PRDM9-201ENST00000296682 TRPT1Q86TN4 253 aaKnown RBP6.83□□□□□ -1.32
PRDM9-201ENST00000296682 DEFB4AO15263 64 aa6.83□□□□□ -1.32
PRDM9-201ENST00000296682 FGF6P10767 208 aa6.83□□□□□ -1.32
PRDM9-201ENST00000296682 Q1RN00 199 aa6.83□□□□□ -1.32
PRDM9-201ENST00000296682 TOMM6Q96B49 74 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms