RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 C19orf73Q9NVV2 129 aa11.41□□□□□ -0.58
LSM6-201ENST00000296581 D6R8Y8 96 aa11.4□□□□□ -0.58
LSM6-201ENST00000296581 EVI2AP22794 236 aa11.4□□□□□ -0.58
LSM6-201ENST00000296581 STHQ8IWL8 128 aa11.4□□□□□ -0.58
LSM6-201ENST00000296581 ORMDL3Q8N138 153 aa11.4□□□□□ -0.58
LSM6-201ENST00000296581 C9orf85Q96MD7 179 aa11.4□□□□□ -0.58
LSM6-201ENST00000296581 MUC4Q99102 2169 aa11.4□□□□□ -0.58
LSM6-201ENST00000296581 INSL3P51460 131 aa11.4□□□□□ -0.58
LSM6-201ENST00000296581 Q8N1Y9 231 aa11.4□□□□□ -0.58
LSM6-201ENST00000296581 RNF183Q96D59 192 aa11.4□□□□□ -0.58
LSM6-201ENST00000296581 M0R381 172 aa11.39□□□□□ -0.59
LSM6-201ENST00000296581 ERG28Q9UKR5 140 aa11.39□□□□□ -0.59
LSM6-201ENST00000296581 NIPBLQ6KC79 2804 aaeCLIP11.39□□□□□ -0.59
LSM6-201ENST00000296581 SPRY2O43597 315 aa11.39□□□□□ -0.59
LSM6-201ENST00000296581 WFDC2Q14508 124 aa11.39□□□□□ -0.59
LSM6-201ENST00000296581 KRTAP24-1Q3LI83 254 aa11.39□□□□□ -0.59
LSM6-201ENST00000296581 PRELID3AQ96N28 172 aa11.39□□□□□ -0.59
LSM6-201ENST00000296581 TRGV11A0A075B6L2 103 aa11.38□□□□□ -0.59
LSM6-201ENST00000296581 CKS2P33552 79 aa11.38□□□□□ -0.59
LSM6-201ENST00000296581 SPATA3Q8NHX4 192 aa11.38□□□□□ -0.59
LSM6-201ENST00000296581 MDFICQ9P1T7 246 aa11.38□□□□□ -0.59
LSM6-201ENST00000296581 HSPB8Q9UJY1 196 aa11.38□□□□□ -0.59
LSM6-201ENST00000296581 TEP1Q99973 2627 aaKnown RBP11.38□□□□□ -0.59
LSM6-201ENST00000296581 F8W1H4 67 aa11.38□□□□□ -0.59
LSM6-201ENST00000296581 INSP01308 110 aa11.38□□□□□ -0.59
LSM6-201ENST00000296581 C9orf66Q5T8R8 295 aa11.38□□□□□ -0.59
LSM6-201ENST00000296581 BOD1L2Q8IYS8 172 aa11.38□□□□□ -0.59
LSM6-201ENST00000296581 LINC00467Q9BRT7 94 aa11.38□□□□□ -0.59
LSM6-201ENST00000296581 TENM1Q9UKZ4 2725 aa11.37□□□□□ -0.59
LSM6-201ENST00000296581 SMKR1H3BMG3 65 aa11.37□□□□□ -0.59
LSM6-201ENST00000296581 ATRQ13535 2644 aa11.36□□□□□ -0.59
LSM6-201ENST00000296581 NCR2O95944 276 aa11.36□□□□□ -0.59
LSM6-201ENST00000296581 SH2D6Q7Z4S9 175 aa11.36□□□□□ -0.59
LSM6-201ENST00000296581 DPH3P1Q9H4G8 78 aa11.36□□□□□ -0.59
LSM6-201ENST00000296581 NPYP01303 97 aa11.35□□□□□ -0.59
LSM6-201ENST00000296581 SMIM13P0DJ93 91 aa11.35□□□□□ -0.59
LSM6-201ENST00000296581 C18orf15Q96N68 181 aa11.35□□□□□ -0.59
LSM6-201ENST00000296581 SIVA1O15304 175 aa11.35□□□□□ -0.59
LSM6-201ENST00000296581 GAGE5Q13069 117 aa11.35□□□□□ -0.59
LSM6-201ENST00000296581 GAGE6Q13070 117 aa11.35□□□□□ -0.59
LSM6-201ENST00000296581 ETDBQ3ZM63 59 aa11.35□□□□□ -0.59
LSM6-201ENST00000296581 WFDC10AQ9H1F0 79 aa11.35□□□□□ -0.59
LSM6-201ENST00000296581 GAS8-AS1O95177 125 aa11.34□□□□□ -0.59
LSM6-201ENST00000296581 SPINK8P0C7L1 97 aa11.34□□□□□ -0.59
LSM6-201ENST00000296581 WFDC9Q8NEX5 89 aa11.34□□□□□ -0.59
LSM6-201ENST00000296581 C14orf178Q8N769 122 aaPredicted RBP11.34□□□□□ -0.59
LSM6-201ENST00000296581 POM121L12Q8N7R1 296 aa11.34□□□□□ -0.59
LSM6-201ENST00000296581 ZNF747Q9BV97 191 aa11.34□□□□□ -0.59
LSM6-201ENST00000296581 XCL2Q9UBD3 114 aa11.34□□□□□ -0.59
LSM6-201ENST00000296581 CYSLTR1Q9Y271 337 aa11.34□□□□□ -0.59
LSM6-201ENST00000296581 KIF25-AS1Q9Y6Z4 181 aa11.34□□□□□ -0.59
LSM6-201ENST00000296581 ODF1Q14990 250 aa11.33□□□□□ -0.6
LSM6-201ENST00000296581 LINC01587Q99440 93 aa11.33□□□□□ -0.6
LSM6-201ENST00000296581 TNFRSF6BO95407 300 aa11.33□□□□□ -0.6
LSM6-201ENST00000296581 SYT8Q8NBV8 401 aa11.33□□□□□ -0.6
LSM6-201ENST00000296581 LINC00315P59091 139 aa11.32□□□□□ -0.6
LSM6-201ENST00000296581 PRIMA1Q86XR5 153 aa11.32□□□□□ -0.6
LSM6-201ENST00000296581 C1orf158Q8N1D5 194 aa11.32□□□□□ -0.6
LSM6-201ENST00000296581 NRACQ8N912 160 aa11.32□□□□□ -0.6
LSM6-201ENST00000296581 PRSS3P2Q8NHM4 247 aa11.32□□□□□ -0.6
LSM6-201ENST00000296581 C20orf78Q9BR46 151 aa11.32□□□□□ -0.6
LSM6-201ENST00000296581 CDIP1Q9H305 208 aa11.32□□□□□ -0.6
LSM6-201ENST00000296581 TNFRSF18Q9Y5U5 241 aa11.32□□□□□ -0.6
LSM6-201ENST00000296581 GIG44P09565 113 aaPredicted RBP11.32□□□□□ -0.6
LSM6-201ENST00000296581 GATA1P15976 413 aaPredicted RBP11.32□□□□□ -0.6
LSM6-201ENST00000296581 IFI27P40305 119 aaPredicted RBP11.32□□□□□ -0.6
LSM6-201ENST00000296581 MT-ATP8P03928 68 aa11.31□□□□□ -0.6
LSM6-201ENST00000296581 MAP1LC3AQ9H492 121 aa11.31□□□□□ -0.6
LSM6-201ENST00000296581 AP5S1Q9NUS5 200 aa11.31□□□□□ -0.6
LSM6-201ENST00000296581 TRAV26-2A0A0B4J265 109 aa11.3□□□□□ -0.6
LSM6-201ENST00000296581 LOC389332A0A1B0GUA5 103 aa11.3□□□□□ -0.6
LSM6-201ENST00000296581 B5MCH6 92 aa11.3□□□□□ -0.6
LSM6-201ENST00000296581 HTN1P15515 57 aa11.3□□□□□ -0.6
LSM6-201ENST00000296581 ZNF415Q09FC8 603 aa11.3□□□□□ -0.6
LSM6-201ENST00000296581 MORN3Q6PF18 240 aaPredicted RBP11.3□□□□□ -0.6
LSM6-201ENST00000296581 C11orf72Q8NBR9 251 aa11.3□□□□□ -0.6
LSM6-201ENST00000296581 PTH2Q96A98 100 aa11.3□□□□□ -0.6
LSM6-201ENST00000296581 ANAPC13Q9BS18 74 aa11.3□□□□□ -0.6
LSM6-201ENST00000296581 JPT2Q9H910 190 aa11.3□□□□□ -0.6
LSM6-201ENST00000296581 WIPF1O43516 503 aa11.3□□□□□ -0.6
LSM6-201ENST00000296581 RPL32P62910 135 aaKnown RBP11.3□□□□□ -0.6
LSM6-201ENST00000296581 GTSCR1Q86UQ5 136 aa11.3□□□□□ -0.6
LSM6-201ENST00000296581 VWFP04275 2813 aa11.3□□□□□ -0.6
LSM6-201ENST00000296581 K7ERJ3 54 aa11.29□□□□□ -0.6
LSM6-201ENST00000296581 PRM2P04554 102 aa11.29□□□□□ -0.6
LSM6-201ENST00000296581 PHLDA1Q8WV24 401 aaPredicted RBP11.29□□□□□ -0.6
LSM6-201ENST00000296581 LINC01546A6NGU7 62 aa11.29□□□□□ -0.6
LSM6-201ENST00000296581 MGPP08493 103 aa11.29□□□□□ -0.6
LSM6-201ENST00000296581 RPL35AP18077 110 aaKnown RBP11.29□□□□□ -0.6
LSM6-201ENST00000296581 FXYD2P54710 66 aa11.29□□□□□ -0.6
LSM6-201ENST00000296581 ZNF876PQ49A33 203 aa11.29□□□□□ -0.6
LSM6-201ENST00000296581 PIK3CD-AS1Q5SR53 167 aa11.29□□□□□ -0.6
LSM6-201ENST00000296581 SMIM20Q8N5G0 67 aa11.29□□□□□ -0.6
LSM6-201ENST00000296581 E9PLD3 99 aa11.28□□□□□ -0.6
LSM6-201ENST00000296581 TCTAP57738 103 aa11.28□□□□□ -0.6
LSM6-201ENST00000296581 C1QTNF4Q9BXJ3 329 aa11.28□□□□□ -0.6
LSM6-201ENST00000296581 NXT2Q9NPJ8 142 aaKnown RBP11.28□□□□□ -0.6
LSM6-201ENST00000296581 H3BMG7 143 aa11.28□□□□□ -0.6
LSM6-201ENST00000296581 CRYGDP07320 174 aa11.28□□□□□ -0.6
LSM6-201ENST00000296581 GCSHP23434 173 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms