RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 RNF152Q8N8N0 203 aa11.14□□□□□ -0.63
CCDC116-201ENST00000292779 PRADC1Q9BSG0 188 aa11.14□□□□□ -0.63
CCDC116-201ENST00000292779 TRBV6-5A0A0K0K1A5 114 aa11.13□□□□□ -0.63
CCDC116-201ENST00000292779 SLURP1P55000 103 aa11.13□□□□□ -0.63
CCDC116-201ENST00000292779 MORN3Q6PF18 240 aaPredicted RBP11.13□□□□□ -0.63
CCDC116-201ENST00000292779 SMR3AQ99954 134 aa11.13□□□□□ -0.63
CCDC116-201ENST00000292779 IGLV4-69A0A075B6H9 119 aa11.12□□□□□ -0.63
CCDC116-201ENST00000292779 TRBV7-3A0A075B6L6 115 aa11.12□□□□□ -0.63
CCDC116-201ENST00000292779 M0QY20 66 aa11.12□□□□□ -0.63
CCDC116-201ENST00000292779 ZNF256Q9Y2P7 627 aaPredicted RBP11.12□□□□□ -0.63
CCDC116-201ENST00000292779 LINC01549A6NIU2 74 aa11.12□□□□□ -0.63
CCDC116-201ENST00000292779 C11orf86A6NJI1 115 aa11.12□□□□□ -0.63
CCDC116-201ENST00000292779 EMP1P54849 157 aa11.12□□□□□ -0.63
CCDC116-201ENST00000292779 OR5A1Q8NGJ0 315 aa11.12□□□□□ -0.63
CCDC116-201ENST00000292779 RIPPLY3P57055 190 aa11.11□□□□□ -0.63
CCDC116-201ENST00000292779 PMVKQ15126 192 aa11.11□□□□□ -0.63
CCDC116-201ENST00000292779 ZNF876PQ49A33 203 aa11.11□□□□□ -0.63
CCDC116-201ENST00000292779 KNCNA6PVL3 124 aa11.11□□□□□ -0.63
CCDC116-201ENST00000292779 LINC01619G3V211 115 aa11.11□□□□□ -0.63
CCDC116-201ENST00000292779 C12orf74Q32Q52 190 aa11.11□□□□□ -0.63
CCDC116-201ENST00000292779 CD300EQ496F6 205 aaPredicted RBP11.11□□□□□ -0.63
CCDC116-201ENST00000292779 TMEM141Q96I45 108 aa11.11□□□□□ -0.63
CCDC116-201ENST00000292779 TIMM17AQ99595 171 aa11.11□□□□□ -0.63
CCDC116-201ENST00000292779 RBMY1A1P0DJD3 496 aaKnown RBP11.1□□□□□ -0.63
CCDC116-201ENST00000292779 RBMY1CP0DJD4 496 aa11.1□□□□□ -0.63
CCDC116-201ENST00000292779 RBMY1FQ15415 496 aaKnown RBP11.1□□□□□ -0.63
CCDC116-201ENST00000292779 ZNF815PA8K554 130 aa11.1□□□□□ -0.63
CCDC116-201ENST00000292779 TRGV11A0A075B6L2 103 aa11.09□□□□□ -0.63
CCDC116-201ENST00000292779 IGLL5B9A064 214 aa11.09□□□□□ -0.63
CCDC116-201ENST00000292779 SAP30O75446 220 aa11.09□□□□□ -0.63
CCDC116-201ENST00000292779 PCP4P48539 62 aa11.09□□□□□ -0.63
CCDC116-201ENST00000292779 DEFB131AP59861 70 aa11.09□□□□□ -0.63
CCDC116-201ENST00000292779 TRPT1Q86TN4 253 aaKnown RBP11.09□□□□□ -0.63
CCDC116-201ENST00000292779 Q8N2B8 174 aa11.09□□□□□ -0.63
CCDC116-201ENST00000292779 K7ERU9 68 aa11.09□□□□□ -0.63
CCDC116-201ENST00000292779 SCGB2A2Q13296 93 aa11.09□□□□□ -0.63
CCDC116-201ENST00000292779 KLHL30-AS1Q8NEE0 82 aa11.09□□□□□ -0.63
CCDC116-201ENST00000292779 DUX3Q96PT4 197 aa11.09□□□□□ -0.63
CCDC116-201ENST00000292779 HTN1P15515 57 aa11.08□□□□□ -0.64
CCDC116-201ENST00000292779 PAPPA-AS1Q5QFB9 102 aa11.08□□□□□ -0.64
CCDC116-201ENST00000292779 PLEKHB2Q96CS7 222 aa11.08□□□□□ -0.64
CCDC116-201ENST00000292779 NSD1Q96L73 2696 aaPredicted RBP11.08□□□□□ -0.64
CCDC116-201ENST00000292779 HIST2H2BDQ6DRA6 164 aa11.07□□□□□ -0.64
CCDC116-201ENST00000292779 VPS25Q9BRG1 176 aa11.07□□□□□ -0.64
CCDC116-201ENST00000292779 NSUN5P1Q3KNT7 163 aa11.07□□□□□ -0.64
CCDC116-201ENST00000292779 SCGB1D4Q6XE38 83 aa11.07□□□□□ -0.64
CCDC116-201ENST00000292779 SETD2Q9BYW2 2564 aaPredicted RBP11.07□□□□□ -0.64
CCDC116-201ENST00000292779 P0DMU3 169 aa11.06□□□□□ -0.64
CCDC116-201ENST00000292779 FAM231AP0DMU4 169 aa11.06□□□□□ -0.64
CCDC116-201ENST00000292779 FAM231CP0DMU5 169 aa11.06□□□□□ -0.64
CCDC116-201ENST00000292779 RHOHQ15669 191 aa11.06□□□□□ -0.64
CCDC116-201ENST00000292779 C21orf62-AS1Q17RA5 79 aa11.06□□□□□ -0.64
CCDC116-201ENST00000292779 KHDC1LQ5JSQ8 128 aa11.06□□□□□ -0.64
CCDC116-201ENST00000292779 ZNRF2Q8NHG8 242 aa11.06□□□□□ -0.64
CCDC116-201ENST00000292779 ZNF479Q96JC4 524 aa11.06□□□□□ -0.64
CCDC116-201ENST00000292779 OPRPNQ99935 248 aaPredicted RBP11.06□□□□□ -0.64
CCDC116-201ENST00000292779 CYSRT1A8MQ03 144 aa11.06□□□□□ -0.64
CCDC116-201ENST00000292779 HERVK_113P61574 105 aa11.06□□□□□ -0.64
CCDC116-201ENST00000292779 TMEM61Q8N0U2 210 aa11.06□□□□□ -0.64
CCDC116-201ENST00000292779 A0A1B0GWB2 263 aa11.05□□□□□ -0.64
CCDC116-201ENST00000292779 RBMY1BA6NDE4 496 aaKnown RBP11.05□□□□□ -0.64
CCDC116-201ENST00000292779 RBMY1EA6NEQ0 496 aaKnown RBP11.05□□□□□ -0.64
CCDC116-201ENST00000292779 H3BMM0 161 aa11.05□□□□□ -0.64
CCDC116-201ENST00000292779 RBMY1DP0C7P1 496 aaKnown RBP11.05□□□□□ -0.64
CCDC116-201ENST00000292779 TMEM170BQ5T4T1 132 aa11.05□□□□□ -0.64
CCDC116-201ENST00000292779 I3L3M4 83 aa11.05□□□□□ -0.64
CCDC116-201ENST00000292779 PRM2P04554 102 aa11.05□□□□□ -0.64
CCDC116-201ENST00000292779 IGHV3-73A0A0B4J1V6 119 aa11.04□□□□□ -0.64
CCDC116-201ENST00000292779 A8MTW9 85 aa11.04□□□□□ -0.64
CCDC116-201ENST00000292779 C4orf3Q8WVX3 66 aa11.04□□□□□ -0.64
CCDC116-201ENST00000292779 PEMTQ9UBM1 199 aa11.04□□□□□ -0.64
CCDC116-201ENST00000292779 NACAE9PAV3 2078 aa11.04□□□□□ -0.64
CCDC116-201ENST00000292779 TSPEAR-AS2P59090 65 aa11.04□□□□□ -0.64
CCDC116-201ENST00000292779 C20orf203Q8NBC4 194 aa11.04□□□□□ -0.64
CCDC116-201ENST00000292779 YAE1D1Q9NRH1 226 aa11.04□□□□□ -0.64
CCDC116-201ENST00000292779 HIVEP2P31629 2446 aa11.03□□□□□ -0.64
CCDC116-201ENST00000292779 PROK1P58294 105 aa11.03□□□□□ -0.64
CCDC116-201ENST00000292779 SRSF9Q13242 221 aaKnown RBP eCLIP11.03□□□□□ -0.64
CCDC116-201ENST00000292779 RRN3P1Q2M238 152 aa11.03□□□□□ -0.64
CCDC116-201ENST00000292779 DLX4Q92988 240 aaPredicted RBP11.03□□□□□ -0.64
CCDC116-201ENST00000292779 NIPBLQ6KC79 2804 aaeCLIP11.03□□□□□ -0.64
CCDC116-201ENST00000292779 TRAV2A0A0B4J234 112 aa11.02□□□□□ -0.65
CCDC116-201ENST00000292779 A0A0J9YY99 117 aa11.01□□□□□ -0.65
CCDC116-201ENST00000292779 NFE4Q86UQ8 179 aa11.01□□□□□ -0.65
CCDC116-201ENST00000292779 MAP6D1Q9H9H5 199 aa11.01□□□□□ -0.65
CCDC116-201ENST00000292779 FN1P02751 2386 aaKnown RBP11.01□□□□□ -0.65
CCDC116-201ENST00000292779 G3V4G9 280 aa11.01□□□□□ -0.65
CCDC116-201ENST00000292779 DYNLRB2Q8TF09 96 aa11.01□□□□□ -0.65
CCDC116-201ENST00000292779 TEP1Q99973 2627 aaKnown RBP11□□□□□ -0.65
CCDC116-201ENST00000292779 Q6ZSV7 163 aa11□□□□□ -0.65
CCDC116-201ENST00000292779 SPAG8Q99932 426 aaPredicted RBP11□□□□□ -0.65
CCDC116-201ENST00000292779 TMEM238LA0A1B0GVL6 79 aa11□□□□□ -0.65
CCDC116-201ENST00000292779 A6NJY4 79 aa11□□□□□ -0.65
CCDC116-201ENST00000292779 M0R2P5 195 aa11□□□□□ -0.65
CCDC116-201ENST00000292779 LY6G6DO95868 133 aa11□□□□□ -0.65
CCDC116-201ENST00000292779 EDA2RQ9HAV5 297 aa11□□□□□ -0.65
CCDC116-201ENST00000292779 F8P00451 2351 aa10.99□□□□□ -0.65
CCDC116-201ENST00000292779 IGLV4-3A0A075B6K6 122 aa10.99□□□□□ -0.65
CCDC116-201ENST00000292779 H3BMG7 143 aa10.99□□□□□ -0.65
CCDC116-201ENST00000292779 J3QQQ9 107 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms