RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 PIP4P2Q8N4L2 257 aa9.67□□□□□ -0.86
SLC6A1-201ENST00000287766 XCL2Q9UBD3 114 aa9.67□□□□□ -0.86
SLC6A1-201ENST00000287766 ADAMTS20P59510 1910 aa9.67□□□□□ -0.86
SLC6A1-201ENST00000287766 LRRK2Q5S007 2527 aa9.67□□□□□ -0.86
SLC6A1-201ENST00000287766 CENPVL3A0A0U1RRI6 287 aa9.67□□□□□ -0.86
SLC6A1-201ENST00000287766 NPBQ8NG41 125 aa9.67□□□□□ -0.86
SLC6A1-201ENST00000287766 BUB3O43684 328 aa9.67□□□□□ -0.86
SLC6A1-201ENST00000287766 DEFB130BP0DP73 79 aa9.67□□□□□ -0.86
SLC6A1-201ENST00000287766 DEFB130AP0DP74 79 aa9.67□□□□□ -0.86
SLC6A1-201ENST00000287766 TMEM258P61165 79 aa9.67□□□□□ -0.86
SLC6A1-201ENST00000287766 TRAV25A0A0B4J276 109 aa9.66□□□□□ -0.86
SLC6A1-201ENST00000287766 CFHR3Q02985 330 aa9.66□□□□□ -0.86
SLC6A1-201ENST00000287766 NRGNQ92686 78 aa9.66□□□□□ -0.86
SLC6A1-201ENST00000287766 B4DSR2 109 aa9.66□□□□□ -0.86
SLC6A1-201ENST00000287766 ATOX1O00244 68 aa9.66□□□□□ -0.86
SLC6A1-201ENST00000287766 RPL39P62891 51 aaKnown RBP9.66□□□□□ -0.86
SLC6A1-201ENST00000287766 CLEC2BQ92478 149 aa9.66□□□□□ -0.86
SLC6A1-201ENST00000287766 ABCA12Q86UK0 2595 aa9.66□□□□□ -0.86
SLC6A1-201ENST00000287766 WI2-2373I1.2A0A1W2PRP0 233 aa9.66□□□□□ -0.86
SLC6A1-201ENST00000287766 FAM223BA6NKX1 122 aa9.66□□□□□ -0.86
SLC6A1-201ENST00000287766 ACYP1P07311 99 aa9.66□□□□□ -0.86
SLC6A1-201ENST00000287766 FAM223AQ8IWN6 122 aa9.66□□□□□ -0.86
SLC6A1-201ENST00000287766 IGHV4-61A0A0C4DH41 118 aa9.66□□□□□ -0.86
SLC6A1-201ENST00000287766 IGHV1OR15-1A0A075B7D0 117 aa9.65□□□□□ -0.86
SLC6A1-201ENST00000287766 IGHV4-38-2P0DP08 117 aa9.65□□□□□ -0.86
SLC6A1-201ENST00000287766 MSMBP08118 114 aa9.65□□□□□ -0.86
SLC6A1-201ENST00000287766 RPL35AP18077 110 aaKnown RBP9.65□□□□□ -0.86
SLC6A1-201ENST00000287766 ICOSQ9Y6W8 199 aa9.65□□□□□ -0.86
SLC6A1-201ENST00000287766 TCL1BO95988 128 aa9.65□□□□□ -0.86
SLC6A1-201ENST00000287766 CRIP1P50238 77 aa9.65□□□□□ -0.86
SLC6A1-201ENST00000287766 CDSNQ15517 529 aa9.65□□□□□ -0.86
SLC6A1-201ENST00000287766 USMG5Q96IX5 58 aa9.65□□□□□ -0.86
SLC6A1-201ENST00000287766 TRAV13-2A0A0B4J235 113 aa9.64□□□□□ -0.87
SLC6A1-201ENST00000287766 Q8N1Y9 231 aa9.64□□□□□ -0.87
SLC6A1-201ENST00000287766 FREM2Q5SZK8 3169 aa9.64□□□□□ -0.87
SLC6A1-201ENST00000287766 C11orf86A6NJI1 115 aa9.64□□□□□ -0.87
SLC6A1-201ENST00000287766 TRBV12-3P01733 135 aa9.64□□□□□ -0.87
SLC6A1-201ENST00000287766 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.63□□□□□ -0.87
SLC6A1-201ENST00000287766 A0A0B4J2C4 111 aa9.63□□□□□ -0.87
SLC6A1-201ENST00000287766 IGKV2-29A2NJV5 120 aaPredicted RBP9.63□□□□□ -0.87
SLC6A1-201ENST00000287766 RNF223E7ERA6 249 aa9.63□□□□□ -0.87
SLC6A1-201ENST00000287766 RHODO00212 210 aa9.63□□□□□ -0.87
SLC6A1-201ENST00000287766 DSCR8Q96T75 97 aa9.63□□□□□ -0.87
SLC6A1-201ENST00000287766 COL6A3P12111 3177 aa9.63□□□□□ -0.87
SLC6A1-201ENST00000287766 E9PLD3 99 aa9.63□□□□□ -0.87
SLC6A1-201ENST00000287766 CRYGBP07316 175 aa9.63□□□□□ -0.87
SLC6A1-201ENST00000287766 DAD1P61803 113 aa9.63□□□□□ -0.87
SLC6A1-201ENST00000287766 SS18Q15532 418 aa9.63□□□□□ -0.87
SLC6A1-201ENST00000287766 TRBV10-2A0A0K0K1G8 114 aa9.63□□□□□ -0.87
SLC6A1-201ENST00000287766 TEX49A0A1B0GTD5 131 aa9.63□□□□□ -0.87
SLC6A1-201ENST00000287766 MYCNOSP40205 109 aa9.63□□□□□ -0.87
SLC6A1-201ENST00000287766 C5orf47Q569G3 176 aa9.63□□□□□ -0.87
SLC6A1-201ENST00000287766 PCSK5Q92824 1860 aa9.62□□□□□ -0.87
SLC6A1-201ENST00000287766 IGKV2D-26A0A0A0MRZ7 120 aa9.62□□□□□ -0.87
SLC6A1-201ENST00000287766 UNQ9165/PRO28630Q6UXU0 137 aa9.62□□□□□ -0.87
SLC6A1-201ENST00000287766 SPANXCQ9NY87 97 aa9.62□□□□□ -0.87
SLC6A1-201ENST00000287766 NDUFA11Q86Y39 141 aa9.61□□□□□ -0.87
SLC6A1-201ENST00000287766 ATP6V0E2Q8NHE4 81 aa9.61□□□□□ -0.87
SLC6A1-201ENST00000287766 SPTBN5Q9NRC6 3674 aaKnown RBP9.61□□□□□ -0.87
SLC6A1-201ENST00000287766 INSL3P51460 131 aa9.61□□□□□ -0.87
SLC6A1-201ENST00000287766 BRK1Q8WUW1 75 aa9.61□□□□□ -0.87
SLC6A1-201ENST00000287766 IGHV4-59P01825 116 aa9.61□□□□□ -0.87
SLC6A1-201ENST00000287766 HIVEP2P31629 2446 aa9.61□□□□□ -0.87
SLC6A1-201ENST00000287766 NDUFA4O00483 81 aa9.61□□□□□ -0.87
SLC6A1-201ENST00000287766 IGLV2-11P01706 119 aa9.6□□□□□ -0.87
SLC6A1-201ENST00000287766 IGF1P05019 195 aa9.6□□□□□ -0.87
SLC6A1-201ENST00000287766 IGHV4-30-2A0A087WSY4 118 aa9.6□□□□□ -0.87
SLC6A1-201ENST00000287766 BAALCQ8WXS3 180 aa9.6□□□□□ -0.87
SLC6A1-201ENST00000287766 MTORP42345 2549 aa9.6□□□□□ -0.87
SLC6A1-201ENST00000287766 LGALS9O00182 355 aa9.59□□□□□ -0.87
SLC6A1-201ENST00000287766 PKIGQ9Y2B9 76 aa9.59□□□□□ -0.87
SLC6A1-201ENST00000287766 HERVK_113P63121 156 aa9.59□□□□□ -0.87
SLC6A1-201ENST00000287766 MAP1AP78559 2803 aaPredicted RBP9.59□□□□□ -0.87
SLC6A1-201ENST00000287766 DEFB136Q30KP8 78 aa9.59□□□□□ -0.87
SLC6A1-201ENST00000287766 C5orf56Q8N8D9 126 aa9.59□□□□□ -0.87
SLC6A1-201ENST00000287766 AJUBAQ96IF1 538 aa9.59□□□□□ -0.87
SLC6A1-201ENST00000287766 H3BT86 120 aa9.58□□□□□ -0.88
SLC6A1-201ENST00000287766 CCDC140Q96MF4 163 aa9.58□□□□□ -0.88
SLC6A1-201ENST00000287766 SIRPDQ9H106 197 aa9.58□□□□□ -0.88
SLC6A1-201ENST00000287766 ORMDL1Q9P0S3 153 aa9.58□□□□□ -0.88
SLC6A1-201ENST00000287766 IGHV7-4-1A0A0J9YVY3 117 aa9.58□□□□□ -0.88
SLC6A1-201ENST00000287766 RPL32P62910 135 aaKnown RBP9.58□□□□□ -0.88
SLC6A1-201ENST00000287766 CLPSL2Q6UWE3 100 aa9.58□□□□□ -0.88
SLC6A1-201ENST00000287766 hADV29S1A0JD25 119 aa9.58□□□□□ -0.88
SLC6A1-201ENST00000287766 GAS8-AS1O95177 125 aa9.58□□□□□ -0.88
SLC6A1-201ENST00000287766 OPRPNQ99935 248 aaPredicted RBP9.58□□□□□ -0.88
SLC6A1-201ENST00000287766 F8WEM9 126 aa9.57□□□□□ -0.88
SLC6A1-201ENST00000287766 LY6LH3BQJ8 138 aa9.57□□□□□ -0.88
SLC6A1-201ENST00000287766 PSMB8P28062 276 aa9.57□□□□□ -0.88
SLC6A1-201ENST00000287766 C5orf38Q86SI9 138 aa9.57□□□□□ -0.88
SLC6A1-201ENST00000287766 MAPKAPK5-AS1Q8N8E1 139 aa9.57□□□□□ -0.88
SLC6A1-201ENST00000287766 Q8N976 141 aa9.57□□□□□ -0.88
SLC6A1-201ENST00000287766 TM2D2Q9BX73 214 aa9.57□□□□□ -0.88
SLC6A1-201ENST00000287766 DEFB112Q30KQ8 113 aa9.57□□□□□ -0.88
SLC6A1-201ENST00000287766 BOD1L1Q8NFC6 3051 aa9.57□□□□□ -0.88
SLC6A1-201ENST00000287766 C19orf84I3L1E1 186 aa9.57□□□□□ -0.88
SLC6A1-201ENST00000287766 RHOHQ15669 191 aa9.57□□□□□ -0.88
SLC6A1-201ENST00000287766 SND1-IT1Q9HBX3 110 aa9.57□□□□□ -0.88
SLC6A1-201ENST00000287766 JMJD1CQ15652 2540 aa9.57□□□□□ -0.88
SLC6A1-201ENST00000287766 IGLC6P0CF74 106 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms