RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 GAGE12JA6NER3 117 aa6.8□□□□□ -1.32
CCDC144B-201ENST00000285176 MALP21145 153 aa6.8□□□□□ -1.32
CCDC144B-201ENST00000285176 GAGE1Q13065 139 aa6.8□□□□□ -1.32
CCDC144B-201ENST00000285176 GAGE4Q13068 117 aa6.8□□□□□ -1.32
CCDC144B-201ENST00000285176 GAGE5Q13069 117 aa6.8□□□□□ -1.32
CCDC144B-201ENST00000285176 GAGE13Q4V321 117 aa6.8□□□□□ -1.32
CCDC144B-201ENST00000285176 TDRG1Q3Y452 100 aa6.79□□□□□ -1.32
CCDC144B-201ENST00000285176 OXLD1Q5BKU9 147 aa6.79□□□□□ -1.32
CCDC144B-201ENST00000285176 MRPL35Q9NZE8 188 aaKnown RBP6.79□□□□□ -1.32
CCDC144B-201ENST00000285176 GAGE12BA1L429 117 aa6.79□□□□□ -1.32
CCDC144B-201ENST00000285176 GAGE7O76087 117 aa6.79□□□□□ -1.32
CCDC144B-201ENST00000285176 IGLV2-8P01709 118 aa6.79□□□□□ -1.32
CCDC144B-201ENST00000285176 GAGE12FP0CL80 117 aa6.79□□□□□ -1.32
CCDC144B-201ENST00000285176 GAGE12GP0CL81 117 aa6.79□□□□□ -1.32
CCDC144B-201ENST00000285176 GAGE12IP0CL82 117 aa6.79□□□□□ -1.32
CCDC144B-201ENST00000285176 SAMD5Q5TGI4 173 aa6.79□□□□□ -1.32
CCDC144B-201ENST00000285176 DEFB125Q8N687 156 aa6.79□□□□□ -1.32
CCDC144B-201ENST00000285176 C4orf3Q8WVX3 66 aa6.79□□□□□ -1.32
CCDC144B-201ENST00000285176 TRBV7-9A0A0J9YWB2 115 aa6.79□□□□□ -1.32
CCDC144B-201ENST00000285176 KRTAP1-1Q07627 177 aa6.79□□□□□ -1.32
CCDC144B-201ENST00000285176 C11orf68Q9H3H3 251 aaKnown RBP6.79□□□□□ -1.32
CCDC144B-201ENST00000285176 JPT2Q9H910 190 aa6.79□□□□□ -1.32
CCDC144B-201ENST00000285176 TP53TG3Q9ULZ0 132 aa6.79□□□□□ -1.32
CCDC144B-201ENST00000285176 TRAV8-2A0A0B4J237 113 aa6.78□□□□□ -1.32
CCDC144B-201ENST00000285176 CFAP161Q6P656 301 aa6.78□□□□□ -1.32
CCDC144B-201ENST00000285176 LINC00173Q6ZV60 143 aa6.78□□□□□ -1.32
CCDC144B-201ENST00000285176 ZNRF2Q8NHG8 242 aa6.78□□□□□ -1.32
CCDC144B-201ENST00000285176 ZNF625Q96I27 306 aaPredicted RBP6.78□□□□□ -1.32
CCDC144B-201ENST00000285176 AZU1P20160 251 aa6.78□□□□□ -1.32
CCDC144B-201ENST00000285176 ZNF747Q9BV97 191 aa6.78□□□□□ -1.32
CCDC144B-201ENST00000285176 DKK2Q9UBU2 259 aa6.78□□□□□ -1.32
CCDC144B-201ENST00000285176 LENEPQ9Y5L5 61 aa6.78□□□□□ -1.32
CCDC144B-201ENST00000285176 RBAKDNA6NC62 111 aa6.78□□□□□ -1.32
CCDC144B-201ENST00000285176 A8MWV9 139 aa6.77□□□□□ -1.32
CCDC144B-201ENST00000285176 RHODO00212 210 aa6.77□□□□□ -1.32
CCDC144B-201ENST00000285176 DLEU1O43261 78 aa6.77□□□□□ -1.32
CCDC144B-201ENST00000285176 CRLF1O75462 422 aa6.77□□□□□ -1.32
CCDC144B-201ENST00000285176 ESDP10768 282 aa6.77□□□□□ -1.32
CCDC144B-201ENST00000285176 CRIP1P50238 77 aa6.77□□□□□ -1.32
CCDC144B-201ENST00000285176 MRPL53Q96EL3 112 aaKnown RBP6.77□□□□□ -1.32
CCDC144B-201ENST00000285176 DPH3Q96FX2 82 aa6.77□□□□□ -1.32
CCDC144B-201ENST00000285176 MRPS16Q9Y3D3 137 aaKnown RBP6.77□□□□□ -1.32
CCDC144B-201ENST00000285176 LINC00158P58513 81 aa6.77□□□□□ -1.33
CCDC144B-201ENST00000285176 PRR9Q5T870 116 aa6.77□□□□□ -1.33
CCDC144B-201ENST00000285176 CHAC1Q9BUX1 264 aa6.77□□□□□ -1.33
CCDC144B-201ENST00000285176 I3L3M4 83 aa6.77□□□□□ -1.33
CCDC144B-201ENST00000285176 FOXI2Q6ZQN5 318 aa6.77□□□□□ -1.33
CCDC144B-201ENST00000285176 A0A096LPF7 62 aa6.76□□□□□ -1.33
CCDC144B-201ENST00000285176 KLF5Q13887 457 aaPredicted RBP6.76□□□□□ -1.33
CCDC144B-201ENST00000285176 PLEKHB2Q96CS7 222 aa6.76□□□□□ -1.33
CCDC144B-201ENST00000285176 RPL39LQ96EH5 51 aaKnown RBP6.76□□□□□ -1.33
CCDC144B-201ENST00000285176 TIMM21Q9BVV7 248 aa6.76□□□□□ -1.33
CCDC144B-201ENST00000285176 TMEM238C9JI98 176 aa6.76□□□□□ -1.33
CCDC144B-201ENST00000285176 PMVKQ15126 192 aa6.76□□□□□ -1.33
CCDC144B-201ENST00000285176 DEFB114Q30KQ6 69 aa6.76□□□□□ -1.33
CCDC144B-201ENST00000285176 LGALS9BQ3B8N2 356 aa6.76□□□□□ -1.33
CCDC144B-201ENST00000285176 RNASE13Q5GAN3 156 aaKnown RBP6.76□□□□□ -1.33
CCDC144B-201ENST00000285176 LGALS9CQ6DKI2 356 aa6.76□□□□□ -1.33
CCDC144B-201ENST00000285176 MDFICQ9P1T7 246 aa6.76□□□□□ -1.33
CCDC144B-201ENST00000285176 ERG28Q9UKR5 140 aa6.75□□□□□ -1.33
CCDC144B-201ENST00000285176 IGLV2-11P01706 119 aa6.75□□□□□ -1.33
CCDC144B-201ENST00000285176 TMEM86BQ8N661 226 aa6.75□□□□□ -1.33
CCDC144B-201ENST00000285176 DEFB135Q30KP9 77 aa6.75□□□□□ -1.33
CCDC144B-201ENST00000285176 MORN3Q6PF18 240 aaPredicted RBP6.75□□□□□ -1.33
CCDC144B-201ENST00000285176 PRIMA1Q86XR5 153 aa6.75□□□□□ -1.33
CCDC144B-201ENST00000285176 C19orf71A6NCJ1 209 aa6.74□□□□□ -1.33
CCDC144B-201ENST00000285176 F8VRH5 84 aa6.74□□□□□ -1.33
CCDC144B-201ENST00000285176 MRPS12O15235 138 aaKnown RBP6.74□□□□□ -1.33
CCDC144B-201ENST00000285176 PCP4P48539 62 aa6.74□□□□□ -1.33
CCDC144B-201ENST00000285176 C6orf226Q5I0X4 101 aa6.74□□□□□ -1.33
CCDC144B-201ENST00000285176 FSHBP01225 129 aa6.74□□□□□ -1.33
CCDC144B-201ENST00000285176 C20orf78Q9BR46 151 aa6.74□□□□□ -1.33
CCDC144B-201ENST00000285176 MAP6D1Q9H9H5 199 aa6.74□□□□□ -1.33
CCDC144B-201ENST00000285176 C11orf21Q9P2W6 132 aa6.74□□□□□ -1.33
CCDC144B-201ENST00000285176 CRPP02741 224 aa6.74□□□□□ -1.33
CCDC144B-201ENST00000285176 HLA-DRB4P13762 266 aa6.74□□□□□ -1.33
CCDC144B-201ENST00000285176 CKS1BP61024 79 aa6.74□□□□□ -1.33
CCDC144B-201ENST00000285176 Q8N1Y9 231 aa6.74□□□□□ -1.33
CCDC144B-201ENST00000285176 U3KQE9 123 aa6.74□□□□□ -1.33
CCDC144B-201ENST00000285176 HLA-DRB4X5D2U9 266 aa6.74□□□□□ -1.33
CCDC144B-201ENST00000285176 COX8AP10176 69 aa6.74□□□□□ -1.33
CCDC144B-201ENST00000285176 F5H768 121 aa6.73□□□□□ -1.33
CCDC144B-201ENST00000285176 MYCNOSP40205 109 aa6.73□□□□□ -1.33
CCDC144B-201ENST00000285176 C9orf47Q6ZRZ4 202 aa6.73□□□□□ -1.33
CCDC144B-201ENST00000285176 NOP10Q9NPE3 64 aaKnown RBP6.73□□□□□ -1.33
CCDC144B-201ENST00000285176 PGPEP1Q9NXJ5 209 aa6.73□□□□□ -1.33
CCDC144B-201ENST00000285176 K7EMT4 169 aa6.73□□□□□ -1.33
CCDC144B-201ENST00000285176 M0R2P5 195 aa6.73□□□□□ -1.33
CCDC144B-201ENST00000285176 PRSS29PA6NIE9 313 aa6.73□□□□□ -1.33
CCDC144B-201ENST00000285176 K7EQG2 157 aa6.73□□□□□ -1.33
CCDC144B-201ENST00000285176 PAX4O43316 350 aa6.73□□□□□ -1.33
CCDC144B-201ENST00000285176 UBE2V1Q13404 147 aa6.73□□□□□ -1.33
CCDC144B-201ENST00000285176 DCANP1Q8TF63 244 aa6.73□□□□□ -1.33
CCDC144B-201ENST00000285176 SPAG8Q99932 426 aaPredicted RBP6.73□□□□□ -1.33
CCDC144B-201ENST00000285176 MLST8Q9BVC4 326 aa6.73□□□□□ -1.33
CCDC144B-201ENST00000285176 COX11Q9Y6N1 276 aa6.73□□□□□ -1.33
CCDC144B-201ENST00000285176 A0A0J9YX75 114 aa6.72□□□□□ -1.33
CCDC144B-201ENST00000285176 PCP2Q8IVA1 136 aa6.72□□□□□ -1.33
CCDC144B-201ENST00000285176 RASL10AQ92737 203 aa6.72□□□□□ -1.33
CCDC144B-201ENST00000285176 TMEM141Q96I45 108 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms