RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 AGPAT4-IT1Q9H0P7 198 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 STAB1Q9NY15 2570 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 NACAE9PAV3 2078 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 TRGV1A0A0A0MS02 117 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 TRAV8-2A0A0B4J237 113 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 TRGV4A0A0C4DH28 118 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 I3L2K1 104 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 K7EIM0 57 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 DNAL4O96015 105 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 DEFB131AP59861 70 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 C2orf66Q6UXQ4 117 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 LINC00173Q6ZV60 143 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 DYNAPQ8N1N2 210 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 OR5A1Q8NGJ0 315 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 TMEM190Q8WZ59 177 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 CHAC1Q9BUX1 264 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 KLK9Q9UKQ9 250 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 HELZ2Q9BYK8 2649 aaKnown RBP2.18□□□□□ -2.06
HERC4-201ENST00000277817 GNRH2O43555 120 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 IGLV2-23P01705 113 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 CTSGP08311 255 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 P0C879 139 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 ESDP10768 282 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 SCGB1A1P11684 91 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 DSCR9P59020 149 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 Q8N8P6 123 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 KLHL30-AS1Q8NEE0 82 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 COPS9Q8WXC6 57 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 PPDPFQ9H3Y8 114 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 ERG28Q9UKR5 140 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 VCANP13611 3396 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 A0A0C4DFX4 3053 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 MGAM2Q2M2H8 2515 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 IGLV1-47P01700 117 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 CGB3P0DN86 165 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 CGB7P0DN87 165 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 COX8AP10176 69 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 RPL35AP18077 110 aaKnown RBP2.18□□□□□ -2.06
HERC4-201ENST00000277817 MTURNQ8N3F0 131 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 OR11H6Q8NGC7 330 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 GTSF1Q8WW33 167 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 CHCHD5Q9BSY4 110 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 ZNF747Q9BV97 191 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 MRPL35Q9NZE8 188 aaKnown RBP2.18□□□□□ -2.06
HERC4-201ENST00000277817 XCL2Q9UBD3 114 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 TP53TG1Q9Y2A0 90 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 DNAH17Q9UFH2 4485 aa2.18□□□□□ -2.06
HERC4-201ENST00000277817 TANC2Q9HCD6 1990 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 IGHV7-81A0A0B4J1V7 117 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 TRAV13-1A0A0B4J241 112 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 IGHV3-16A0A0C4DH30 117 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 KRTAP9-6A0A140TA67 174 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 IGHV4-38-2P0DP08 117 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 SLC25A16P16260 332 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 BLCAPP62952 87 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 ZNF625Q96I27 306 aaPredicted RBP2.17□□□□□ -2.06
HERC4-201ENST00000277817 IGF2BP2-AS1Q96M15 143 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 SIGMAR1Q99720 223 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 IGHV4-61A0A0C4DH41 118 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 LOC100131303A0A0U1RQF7 123 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 DNAJC9-AS1A6NH13 148 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 A8MWV9 139 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 NDUFA4O00483 81 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 IGHV4-59P01825 116 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 BVES-AS1Q5T3Y7 98 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 FLNCQ14315 2725 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 IGLV11-55A0A075B6I3 123 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 CENPVL3A0A0U1RRI6 287 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 SDHAF1A6NFY7 115 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 PRAC2D3DTV9 90 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 RBX1P62877 108 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 LGALS9BQ3B8N2 356 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 TCTEX1D4Q5JR98 221 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 LGALS9CQ6DKI2 356 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 PCP2Q8IVA1 136 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 C1orf158Q8N1D5 194 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 Q8N7P7 452 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 GTSF1LQ9H1H1 148 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 CST9LQ9H4G1 147 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 KMT2AQ03164 3969 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 IGKV1D-37A0A075B6S9 117 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 LINC01549A6NIU2 74 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 KRTAP4-16G5E9R7 235 aaPredicted RBP2.17□□□□□ -2.06
HERC4-201ENST00000277817 M0R2P5 195 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 DEFB130BP0DP73 79 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 DEFB130AP0DP74 79 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 LINC00158P58513 81 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 DEFB1P60022 68 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 PRR3P79522 188 aaKnown RBP2.17□□□□□ -2.06
HERC4-201ENST00000277817 RPL36AP83881 106 aaKnown RBP2.17□□□□□ -2.06
HERC4-201ENST00000277817 C10orf25Q5T742 122 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 LINC00322Q6ZN03 302 aaPredicted RBP2.17□□□□□ -2.06
HERC4-201ENST00000277817 NPBQ8NG41 125 aa2.17□□□□□ -2.06
HERC4-201ENST00000277817 RPL36ALQ969Q0 106 aaKnown RBP2.17□□□□□ -2.06
HERC4-201ENST00000277817 C11orf68Q9H3H3 251 aaKnown RBP2.17□□□□□ -2.06
HERC4-201ENST00000277817 SORL1Q92673 2214 aa2.16□□□□□ -2.06
HERC4-201ENST00000277817 IGHV3-38A0A0C4DH36 116 aa2.16□□□□□ -2.06
HERC4-201ENST00000277817 IGHV7-4-1A0A0J9YVY3 117 aa2.16□□□□□ -2.06
HERC4-201ENST00000277817 A0A1B0GV72 72 aa2.16□□□□□ -2.06
HERC4-201ENST00000277817 K7ERJ3 54 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms