RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 TRBV7-3A0A075B6L6 115 aa11.96□□□□□ -0.49
SKP2-201ENST00000274254 A0A096LPF7 62 aa11.96□□□□□ -0.49
SKP2-201ENST00000274254 SMKR1H3BMG3 65 aa11.96□□□□□ -0.49
SKP2-201ENST00000274254 NCR2O95944 276 aa11.96□□□□□ -0.49
SKP2-201ENST00000274254 APCSP02743 223 aa11.96□□□□□ -0.49
SKP2-201ENST00000274254 PPBPP02775 128 aa11.96□□□□□ -0.49
SKP2-201ENST00000274254 CKS2P33552 79 aa11.96□□□□□ -0.49
SKP2-201ENST00000274254 RPS10P46783 165 aaKnown RBP11.96□□□□□ -0.49
SKP2-201ENST00000274254 MRPL23Q16540 153 aaKnown RBP11.96□□□□□ -0.49
SKP2-201ENST00000274254 RPL39LQ96EH5 51 aaKnown RBP11.96□□□□□ -0.49
SKP2-201ENST00000274254 DYNC2H1Q8NCM8 4307 aaKnown RBP11.96□□□□□ -0.5
SKP2-201ENST00000274254 D6R8Y8 96 aa11.96□□□□□ -0.5
SKP2-201ENST00000274254 C3orf84H3BNL1 204 aa11.96□□□□□ -0.5
SKP2-201ENST00000274254 RPL36AP83881 106 aaKnown RBP11.96□□□□□ -0.5
SKP2-201ENST00000274254 ORMDL3Q8N138 153 aa11.96□□□□□ -0.5
SKP2-201ENST00000274254 NRACQ8N912 160 aa11.96□□□□□ -0.5
SKP2-201ENST00000274254 RPL36ALQ969Q0 106 aaKnown RBP11.96□□□□□ -0.5
SKP2-201ENST00000274254 DNAJC30Q96LL9 226 aa11.96□□□□□ -0.5
SKP2-201ENST00000274254 MRPL18Q9H0U6 180 aaKnown RBP11.96□□□□□ -0.5
SKP2-201ENST00000274254 TRBV6-5A0A0K0K1A5 114 aa11.95□□□□□ -0.5
SKP2-201ENST00000274254 GAGE12JA6NER3 117 aa11.95□□□□□ -0.5
SKP2-201ENST00000274254 NUDT3O95989 172 aa11.95□□□□□ -0.5
SKP2-201ENST00000274254 TCTAP57738 103 aa11.95□□□□□ -0.5
SKP2-201ENST00000274254 GAGE1Q13065 139 aa11.95□□□□□ -0.5
SKP2-201ENST00000274254 GAGE4Q13068 117 aa11.95□□□□□ -0.5
SKP2-201ENST00000274254 GAGE5Q13069 117 aa11.95□□□□□ -0.5
SKP2-201ENST00000274254 GAGE13Q4V321 117 aa11.95□□□□□ -0.5
SKP2-201ENST00000274254 ZNRF2Q8NHG8 242 aa11.95□□□□□ -0.5
SKP2-201ENST00000274254 APLNQ9ULZ1 77 aa11.95□□□□□ -0.5
SKP2-201ENST00000274254 TRAPPC1Q9Y5R8 145 aa11.95□□□□□ -0.5
SKP2-201ENST00000274254 PPP1R17O96001 155 aa11.94□□□□□ -0.5
SKP2-201ENST00000274254 RAB5AP20339 215 aa11.94□□□□□ -0.5
SKP2-201ENST00000274254 SRIP30626 198 aa11.94□□□□□ -0.5
SKP2-201ENST00000274254 UBE2D3P61077 147 aa11.94□□□□□ -0.5
SKP2-201ENST00000274254 UBE2D2P62837 147 aa11.94□□□□□ -0.5
SKP2-201ENST00000274254 CASC10Q5T4H9 136 aa11.94□□□□□ -0.5
SKP2-201ENST00000274254 FABP9Q0Z7S8 132 aa11.93□□□□□ -0.5
SKP2-201ENST00000274254 KIAA1644Q3SXP7 199 aa11.93□□□□□ -0.5
SKP2-201ENST00000274254 OR10J3Q5JRS4 329 aa11.93□□□□□ -0.5
SKP2-201ENST00000274254 SH2D6Q7Z4S9 175 aa11.93□□□□□ -0.5
SKP2-201ENST00000274254 TNFRSF18Q9Y5U5 241 aa11.93□□□□□ -0.5
SKP2-201ENST00000274254 STARD9Q9P2P6 4700 aa11.93□□□□□ -0.5
SKP2-201ENST00000274254 PHOX2AO14813 284 aa11.92□□□□□ -0.5
SKP2-201ENST00000274254 NEGR1Q7Z3B1 354 aa11.92□□□□□ -0.5
SKP2-201ENST00000274254 PRELID3AQ96N28 172 aa11.92□□□□□ -0.5
SKP2-201ENST00000274254 TNFRSF6BO95407 300 aa11.91□□□□□ -0.5
SKP2-201ENST00000274254 NPYP01303 97 aa11.91□□□□□ -0.5
SKP2-201ENST00000274254 LAMTOR2Q9Y2Q5 125 aa11.91□□□□□ -0.5
SKP2-201ENST00000274254 ATP6V0E2Q8NHE4 81 aa11.91□□□□□ -0.5
SKP2-201ENST00000274254 C20orf78Q9BR46 151 aa11.91□□□□□ -0.5
SKP2-201ENST00000274254 TENM2Q9NT68 2774 aa11.9□□□□□ -0.5
SKP2-201ENST00000274254 SDHAF1A6NFY7 115 aa11.9□□□□□ -0.5
SKP2-201ENST00000274254 POLR2KP53803 58 aaKnown RBP11.9□□□□□ -0.5
SKP2-201ENST00000274254 SUMO2P61956 95 aaKnown RBP11.9□□□□□ -0.5
SKP2-201ENST00000274254 DAZ4Q86SG3 579 aaKnown RBP11.9□□□□□ -0.5
SKP2-201ENST00000274254 ALKBH7Q9BT30 221 aaPredicted RBP11.9□□□□□ -0.5
SKP2-201ENST00000274254 TMEM70Q9BUB7 260 aa11.9□□□□□ -0.5
SKP2-201ENST00000274254 ST20Q9HBF5 79 aa11.9□□□□□ -0.5
SKP2-201ENST00000274254 DAZ3Q9NR90 486 aaKnown RBP11.9□□□□□ -0.5
SKP2-201ENST00000274254 TRGC2P03986 189 aa11.88□□□□□ -0.51
SKP2-201ENST00000274254 RPL32P62910 135 aaKnown RBP11.88□□□□□ -0.51
SKP2-201ENST00000274254 GTSF1LQ9H1H1 148 aa11.88□□□□□ -0.51
SKP2-201ENST00000274254 IGHV3-38A0A0C4DH36 116 aa11.87□□□□□ -0.51
SKP2-201ENST00000274254 TRBV27A0A0K0K1C4 114 aa11.87□□□□□ -0.51
SKP2-201ENST00000274254 PRSS47A8MTI9 375 aa11.87□□□□□ -0.51
SKP2-201ENST00000274254 TIRAPP58753 221 aa11.87□□□□□ -0.51
SKP2-201ENST00000274254 ESRGQ1W209 222 aa11.87□□□□□ -0.51
SKP2-201ENST00000274254 LYPD5Q6UWN5 251 aa11.87□□□□□ -0.51
SKP2-201ENST00000274254 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.86□□□□□ -0.51
SKP2-201ENST00000274254 SMIM2Q9BVW6 85 aa11.86□□□□□ -0.51
SKP2-201ENST00000274254 MAP1LC3AQ9H492 121 aa11.86□□□□□ -0.51
SKP2-201ENST00000274254 I3L3M4 83 aa11.85□□□□□ -0.51
SKP2-201ENST00000274254 VCYO14598 125 aa11.85□□□□□ -0.51
SKP2-201ENST00000274254 PLECQ15149 4684 aaKnown RBP11.85□□□□□ -0.51
SKP2-201ENST00000274254 IGLV2-18A0A075B6J9 118 aa11.84□□□□□ -0.51
SKP2-201ENST00000274254 PMCHP20382 165 aa11.84□□□□□ -0.51
SKP2-201ENST00000274254 CCL18P55774 89 aa11.84□□□□□ -0.51
SKP2-201ENST00000274254 NTM-AS1Q6ZSK4 140 aa11.84□□□□□ -0.51
SKP2-201ENST00000274254 TMEM97Q5BJF2 176 aa11.83□□□□□ -0.52
SKP2-201ENST00000274254 LINC00588Q9Y4M8 146 aa11.83□□□□□ -0.52
SKP2-201ENST00000274254 TRBV6-8A0A0A6YYG3 113 aa11.82□□□□□ -0.52
SKP2-201ENST00000274254 LOC389332A0A1B0GUA5 103 aa11.82□□□□□ -0.52
SKP2-201ENST00000274254 TSHBP01222 138 aa11.82□□□□□ -0.52
SKP2-201ENST00000274254 COTL1Q14019 142 aa11.82□□□□□ -0.52
SKP2-201ENST00000274254 LELP1Q5T871 98 aa11.82□□□□□ -0.52
SKP2-201ENST00000274254 C18orf32Q8TCD1 76 aa11.82□□□□□ -0.52
SKP2-201ENST00000274254 DEFB104AQ8WTQ1 72 aa11.82□□□□□ -0.52
SKP2-201ENST00000274254 KIR2DL4Q99706 377 aa11.81□□□□□ -0.52
SKP2-201ENST00000274254 MRPS16Q9Y3D3 137 aaKnown RBP11.81□□□□□ -0.52
SKP2-201ENST00000274254 IQCJQ1A5X6 159 aa11.81□□□□□ -0.52
SKP2-201ENST00000274254 Q8N8P6 123 aa11.81□□□□□ -0.52
SKP2-201ENST00000274254 NXT2Q9NPJ8 142 aaKnown RBP11.81□□□□□ -0.52
SKP2-201ENST00000274254 IFI27P40305 119 aaPredicted RBP11.8□□□□□ -0.52
SKP2-201ENST00000274254 UPK3BQ9BT76 320 aa11.8□□□□□ -0.52
SKP2-201ENST00000274254 TRBV25-1A0A075B6N4 114 aa11.79□□□□□ -0.52
SKP2-201ENST00000274254 IGHV1-24A0A0C4DH33 117 aa11.79□□□□□ -0.52
SKP2-201ENST00000274254 LGALS9CQ6DKI2 356 aa11.79□□□□□ -0.52
SKP2-201ENST00000274254 TCAPO15273 167 aa11.78□□□□□ -0.52
SKP2-201ENST00000274254 LINC01546A6NGU7 62 aa11.77□□□□□ -0.52
SKP2-201ENST00000274254 K7EMI3 77 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms