RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 FAM231AP0DMU4 169 aa8.76□□□□□ -1.01
USP53-201ENST00000274030 FAM231CP0DMU5 169 aa8.76□□□□□ -1.01
USP53-201ENST00000274030 C22orf34Q6ZV56 151 aa8.76□□□□□ -1.01
USP53-201ENST00000274030 C19orf84I3L1E1 186 aa8.75□□□□□ -1.01
USP53-201ENST00000274030 FUSP35637 526 aaKnown RBP eCLIP8.75□□□□□ -1.01
USP53-201ENST00000274030 NAV2Q8IVL1 2488 aa8.75□□□□□ -1.01
USP53-201ENST00000274030 NCOR2Q9Y618 2525 aa8.75□□□□□ -1.01
USP53-201ENST00000274030 WFDC2Q14508 124 aa8.75□□□□□ -1.01
USP53-201ENST00000274030 HIST2H2BDQ6DRA6 164 aa8.75□□□□□ -1.01
USP53-201ENST00000274030 TP53TG3Q9ULZ0 132 aa8.74□□□□□ -1.01
USP53-201ENST00000274030 MED12LQ86YW9 2145 aa8.74□□□□□ -1.01
USP53-201ENST00000274030 C4orf3Q8WVX3 66 aa8.74□□□□□ -1.01
USP53-201ENST00000274030 PLXNB3Q9ULL4 1909 aa8.74□□□□□ -1.01
USP53-201ENST00000274030 CLPSL1A2RUU4 121 aa8.74□□□□□ -1.01
USP53-201ENST00000274030 ZNF80P51504 273 aaPredicted RBP8.74□□□□□ -1.01
USP53-201ENST00000274030 CLEC2BQ92478 149 aa8.74□□□□□ -1.01
USP53-201ENST00000274030 TOMM6Q96B49 74 aa8.74□□□□□ -1.01
USP53-201ENST00000274030 A0A0J9YX75 114 aa8.74□□□□□ -1.01
USP53-201ENST00000274030 DNAJC9-AS1A6NH13 148 aa8.74□□□□□ -1.01
USP53-201ENST00000274030 LECT2O14960 151 aa8.74□□□□□ -1.01
USP53-201ENST00000274030 NDUFA1O15239 70 aa8.74□□□□□ -1.01
USP53-201ENST00000274030 MYCNOSP40205 109 aa8.74□□□□□ -1.01
USP53-201ENST00000274030 SPAG11BQ08648 103 aa8.74□□□□□ -1.01
USP53-201ENST00000274030 IGKV1D-37A0A075B6S9 117 aa8.73□□□□□ -1.01
USP53-201ENST00000274030 B5MCH6 92 aa8.73□□□□□ -1.01
USP53-201ENST00000274030 LOXL1Q08397 574 aaPredicted RBP8.73□□□□□ -1.01
USP53-201ENST00000274030 SMAD5-AS1Q9Y6J3 95 aa8.73□□□□□ -1.01
USP53-201ENST00000274030 A6NDX4 124 aa8.73□□□□□ -1.01
USP53-201ENST00000274030 MIR7-3HGQ8N6C7 128 aa8.73□□□□□ -1.01
USP53-201ENST00000274030 CCDC140Q96MF4 163 aa8.73□□□□□ -1.01
USP53-201ENST00000274030 CTRLP40313 264 aa8.73□□□□□ -1.01
USP53-201ENST00000274030 LINC00322Q6ZN03 302 aaPredicted RBP8.72□□□□□ -1.01
USP53-201ENST00000274030 H0YGX0 51 aa8.72□□□□□ -1.01
USP53-201ENST00000274030 UBE2AP49459 152 aa8.72□□□□□ -1.01
USP53-201ENST00000274030 LMO4P61968 165 aa8.72□□□□□ -1.01
USP53-201ENST00000274030 LINC01620Q4KN68 170 aa8.72□□□□□ -1.01
USP53-201ENST00000274030 MAP6D1Q9H9H5 199 aa8.72□□□□□ -1.01
USP53-201ENST00000274030 C1orf229Q6ZS94 237 aaPredicted RBP8.72□□□□□ -1.01
USP53-201ENST00000274030 ODF1Q14990 250 aa8.71□□□□□ -1.01
USP53-201ENST00000274030 C5orf47Q569G3 176 aa8.71□□□□□ -1.01
USP53-201ENST00000274030 Q6ZPA2 131 aa8.71□□□□□ -1.01
USP53-201ENST00000274030 PCDH15Q96QU1 1955 aa8.71□□□□□ -1.02
USP53-201ENST00000274030 BRWD1-AS2P59051 145 aa8.71□□□□□ -1.02
USP53-201ENST00000274030 TRAV26-1A0A087WT03 109 aa8.71□□□□□ -1.02
USP53-201ENST00000274030 E9PLD3 99 aa8.71□□□□□ -1.02
USP53-201ENST00000274030 IGF2RP11717 2491 aa8.71□□□□□ -1.02
USP53-201ENST00000274030 HIGD2BQ4VC39 106 aa8.71□□□□□ -1.02
USP53-201ENST00000274030 Q6ZTI0 123 aa8.71□□□□□ -1.02
USP53-201ENST00000274030 Q6ZUT4 128 aa8.71□□□□□ -1.02
USP53-201ENST00000274030 TANC2Q9HCD6 1990 aa8.7□□□□□ -1.02
USP53-201ENST00000274030 NREPQ16612 68 aa8.7□□□□□ -1.02
USP53-201ENST00000274030 C19orf71A6NCJ1 209 aa8.7□□□□□ -1.02
USP53-201ENST00000274030 FBXL19-AS1Q494R0 122 aa8.7□□□□□ -1.02
USP53-201ENST00000274030 TMEM263Q8WUH6 116 aaKnown RBP8.7□□□□□ -1.02
USP53-201ENST00000274030 COL4A3Q01955 1670 aa8.7□□□□□ -1.02
USP53-201ENST00000274030 IGF1P05019 195 aa8.7□□□□□ -1.02
USP53-201ENST00000274030 C20orf203Q8NBC4 194 aa8.7□□□□□ -1.02
USP53-201ENST00000274030 CITED1Q99966 193 aa8.7□□□□□ -1.02
USP53-201ENST00000274030 IGKV2-24A0A0C4DH68 120 aa8.7□□□□□ -1.02
USP53-201ENST00000274030 LGALS9O00182 355 aa8.7□□□□□ -1.02
USP53-201ENST00000274030 PRO0255Q9UI72 69 aa8.7□□□□□ -1.02
USP53-201ENST00000274030 MYO9AB2RTY4 2548 aa8.69□□□□□ -1.02
USP53-201ENST00000274030 C2orf16Q68DN1 1984 aa8.69□□□□□ -1.02
USP53-201ENST00000274030 SS18L2Q9UHA2 77 aa8.69□□□□□ -1.02
USP53-201ENST00000274030 NAV3Q8IVL0 2385 aa8.69□□□□□ -1.02
USP53-201ENST00000274030 PTH2Q96A98 100 aa8.69□□□□□ -1.02
USP53-201ENST00000274030 TM2D2Q9BX73 214 aa8.69□□□□□ -1.02
USP53-201ENST00000274030 DENND4AQ7Z401 1863 aa8.68□□□□□ -1.02
USP53-201ENST00000274030 C11orf1Q9H5F2 150 aa8.68□□□□□ -1.02
USP53-201ENST00000274030 WDR87Q6ZQQ6 2873 aa8.68□□□□□ -1.02
USP53-201ENST00000274030 PIEZO1Q92508 2521 aa8.68□□□□□ -1.02
USP53-201ENST00000274030 IGHV1-58A0A0C4DH39 117 aa8.68□□□□□ -1.02
USP53-201ENST00000274030 A0A1B0GX51 115 aa8.68□□□□□ -1.02
USP53-201ENST00000274030 TAX1BP3O14907 124 aa8.68□□□□□ -1.02
USP53-201ENST00000274030 TNFRSF13BO14836 293 aaPredicted RBP8.67□□□□□ -1.02
USP53-201ENST00000274030 TEN1Q86WV5 123 aa8.67□□□□□ -1.02
USP53-201ENST00000274030 PCNX3Q9H6A9 2034 aa8.67□□□□□ -1.02
USP53-201ENST00000274030 TNRC6AQ8NDV7 1962 aaKnown RBP8.67□□□□□ -1.02
USP53-201ENST00000274030 IGKV2D-26A0A0A0MRZ7 120 aa8.67□□□□□ -1.02
USP53-201ENST00000274030 MED14OSP0DP75 135 aa8.67□□□□□ -1.02
USP53-201ENST00000274030 C10orf99Q6UWK7 81 aa8.67□□□□□ -1.02
USP53-201ENST00000274030 FAM236AA0A1B0GUQ0 79 aa8.67□□□□□ -1.02
USP53-201ENST00000274030 FAM236BA0A1B0GV22 79 aa8.67□□□□□ -1.02
USP53-201ENST00000274030 TMEM89A2RUT3 159 aa8.67□□□□□ -1.02
USP53-201ENST00000274030 LINC00269Q8N2A0 174 aa8.67□□□□□ -1.02
USP53-201ENST00000274030 OBSL1O75147 1896 aa8.67□□□□□ -1.02
USP53-201ENST00000274030 P0C879 139 aa8.67□□□□□ -1.02
USP53-201ENST00000274030 NFE4Q86UQ8 179 aa8.67□□□□□ -1.02
USP53-201ENST00000274030 A0A0B4J2C4 111 aa8.66□□□□□ -1.02
USP53-201ENST00000274030 TRBV6-1A0A0K0K1D8 114 aa8.66□□□□□ -1.02
USP53-201ENST00000274030 ODF3BA8MYP8 253 aa8.66□□□□□ -1.02
USP53-201ENST00000274030 NDUFB1O75438 58 aa8.66□□□□□ -1.02
USP53-201ENST00000274030 ACYP1P07311 99 aa8.66□□□□□ -1.02
USP53-201ENST00000274030 DIRC1Q969H9 104 aa8.66□□□□□ -1.02
USP53-201ENST00000274030 TNRC6BQ9UPQ9 1833 aaKnown RBP8.66□□□□□ -1.02
USP53-201ENST00000274030 DSCAMO60469 2012 aa8.66□□□□□ -1.02
USP53-201ENST00000274030 GDF5OSQ5U4N7 250 aa8.66□□□□□ -1.02
USP53-201ENST00000274030 IGLV2-8P01709 118 aa8.65□□□□□ -1.02
USP53-201ENST00000274030 FAM222AQ5U5X8 452 aa8.65□□□□□ -1.02
USP53-201ENST00000274030 RNASE8Q8TDE3 154 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms