RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 NPFFO15130 113 aa9.65□□□□□ -0.86
COL8A1-202ENST00000273342 POLR2KP53803 58 aaKnown RBP9.65□□□□□ -0.86
COL8A1-202ENST00000273342 CEMP1Q6PRD7 247 aaPredicted RBP9.65□□□□□ -0.86
COL8A1-202ENST00000273342 KIF25-AS1Q9Y6Z4 181 aa9.65□□□□□ -0.86
COL8A1-202ENST00000273342 A8MZ25 164 aa9.64□□□□□ -0.87
COL8A1-202ENST00000273342 AMELXQ99217 191 aa9.64□□□□□ -0.87
COL8A1-202ENST00000273342 C11orf71Q6IPW1 123 aa9.64□□□□□ -0.87
COL8A1-202ENST00000273342 IGHV3-33P01772 117 aa9.64□□□□□ -0.87
COL8A1-202ENST00000273342 LENEPQ9Y5L5 61 aa9.64□□□□□ -0.87
COL8A1-202ENST00000273342 WNK1Q9H4A3 2382 aa9.63□□□□□ -0.87
COL8A1-202ENST00000273342 TRAV8-3A0A0A6YYJ7 113 aa9.63□□□□□ -0.87
COL8A1-202ENST00000273342 SOCS3O14543 225 aa9.63□□□□□ -0.87
COL8A1-202ENST00000273342 BLCAPP62952 87 aa9.63□□□□□ -0.87
COL8A1-202ENST00000273342 ZNF876PQ49A33 203 aa9.63□□□□□ -0.87
COL8A1-202ENST00000273342 SNCGO76070 127 aa9.63□□□□□ -0.87
COL8A1-202ENST00000273342 PAPPA-AS1Q5QFB9 102 aa9.63□□□□□ -0.87
COL8A1-202ENST00000273342 PKD1L2Q7Z442 2459 aa9.63□□□□□ -0.87
COL8A1-202ENST00000273342 ABCA12Q86UK0 2595 aa9.62□□□□□ -0.87
COL8A1-202ENST00000273342 PPP1R17O96001 155 aa9.62□□□□□ -0.87
COL8A1-202ENST00000273342 Q8N1Y9 231 aa9.62□□□□□ -0.87
COL8A1-202ENST00000273342 PRM2P04554 102 aa9.62□□□□□ -0.87
COL8A1-202ENST00000273342 P0DMU3 169 aa9.62□□□□□ -0.87
COL8A1-202ENST00000273342 FAM231AP0DMU4 169 aa9.62□□□□□ -0.87
COL8A1-202ENST00000273342 FAM231CP0DMU5 169 aa9.62□□□□□ -0.87
COL8A1-202ENST00000273342 GAGE2BQ13066 116 aa9.62□□□□□ -0.87
COL8A1-202ENST00000273342 TMEM95Q3KNT9 176 aa9.62□□□□□ -0.87
COL8A1-202ENST00000273342 GAGE2EQ4V326 116 aa9.62□□□□□ -0.87
COL8A1-202ENST00000273342 GAGE2DQ9UEU5 116 aa9.62□□□□□ -0.87
COL8A1-202ENST00000273342 PIEZO1Q92508 2521 aa9.61□□□□□ -0.87
COL8A1-202ENST00000273342 IGHV1-69DA0A0B4J2H0 117 aa9.61□□□□□ -0.87
COL8A1-202ENST00000273342 TMEM263Q8WUH6 116 aaKnown RBP9.61□□□□□ -0.87
COL8A1-202ENST00000273342 CCDC168Q8NDH2 2452 aa9.61□□□□□ -0.87
COL8A1-202ENST00000273342 C3orf56Q8N813 242 aa9.61□□□□□ -0.87
COL8A1-202ENST00000273342 TMEM141Q96I45 108 aa9.61□□□□□ -0.87
COL8A1-202ENST00000273342 SPINK13Q1W4C9 94 aa9.6□□□□□ -0.87
COL8A1-202ENST00000273342 DAND5Q8N907 189 aa9.6□□□□□ -0.87
COL8A1-202ENST00000273342 MOB4Q9Y3A3 225 aa9.6□□□□□ -0.87
COL8A1-202ENST00000273342 PRRC2AP48634 2157 aaKnown RBP9.6□□□□□ -0.87
COL8A1-202ENST00000273342 LRRK2Q5S007 2527 aa9.6□□□□□ -0.87
COL8A1-202ENST00000273342 ABCA2Q9BZC7 2435 aa9.6□□□□□ -0.87
COL8A1-202ENST00000273342 IGHV4OR15-8A0A075B7B6 117 aa9.6□□□□□ -0.87
COL8A1-202ENST00000273342 A0A087WW49 117 aa9.6□□□□□ -0.87
COL8A1-202ENST00000273342 CCDC179H3BU77 68 aa9.6□□□□□ -0.87
COL8A1-202ENST00000273342 NDUFA4O00483 81 aa9.6□□□□□ -0.87
COL8A1-202ENST00000273342 NHLRC4P0CG21 123 aaPredicted RBP9.6□□□□□ -0.87
COL8A1-202ENST00000273342 ZNF22P17026 224 aaPredicted RBP9.6□□□□□ -0.87
COL8A1-202ENST00000273342 TTC32Q5I0X7 151 aa9.6□□□□□ -0.87
COL8A1-202ENST00000273342 TIMM17AQ99595 171 aa9.6□□□□□ -0.87
COL8A1-202ENST00000273342 VCX2Q9H322 139 aa9.6□□□□□ -0.87
COL8A1-202ENST00000273342 PROK1P58294 105 aa9.59□□□□□ -0.87
COL8A1-202ENST00000273342 LINC01620Q4KN68 170 aa9.59□□□□□ -0.87
COL8A1-202ENST00000273342 SBSPONQ8IVN8 264 aa9.59□□□□□ -0.87
COL8A1-202ENST00000273342 A0A0U1RRA0 63 aa9.59□□□□□ -0.87
COL8A1-202ENST00000273342 TMEM223A0PJW6 202 aa9.59□□□□□ -0.87
COL8A1-202ENST00000273342 KNCNA6PVL3 124 aa9.59□□□□□ -0.87
COL8A1-202ENST00000273342 TMEM262E9PQX1 116 aa9.59□□□□□ -0.87
COL8A1-202ENST00000273342 TRIAP1O43715 76 aa9.59□□□□□ -0.87
COL8A1-202ENST00000273342 CLEC2BQ92478 149 aa9.59□□□□□ -0.87
COL8A1-202ENST00000273342 FAM223BA6NKX1 122 aa9.58□□□□□ -0.88
COL8A1-202ENST00000273342 RHODO00212 210 aa9.58□□□□□ -0.88
COL8A1-202ENST00000273342 LMO4P61968 165 aa9.58□□□□□ -0.88
COL8A1-202ENST00000273342 GAGE5Q13069 117 aa9.58□□□□□ -0.88
COL8A1-202ENST00000273342 GAGE6Q13070 117 aa9.58□□□□□ -0.88
COL8A1-202ENST00000273342 FAM223AQ8IWN6 122 aa9.58□□□□□ -0.88
COL8A1-202ENST00000273342 DUX5Q96PT3 197 aa9.58□□□□□ -0.88
COL8A1-202ENST00000273342 Q9UF83 564 aa9.58□□□□□ -0.88
COL8A1-202ENST00000273342 ITPR1Q14643 2758 aa9.58□□□□□ -0.88
COL8A1-202ENST00000273342 H3BUX3 64 aa9.58□□□□□ -0.88
COL8A1-202ENST00000273342 TRBV27A0A0K0K1C4 114 aa9.58□□□□□ -0.88
COL8A1-202ENST00000273342 M0QY20 66 aa9.58□□□□□ -0.88
COL8A1-202ENST00000273342 LEPROTO15243 131 aa9.58□□□□□ -0.88
COL8A1-202ENST00000273342 NBL1P41271 181 aa9.58□□□□□ -0.88
COL8A1-202ENST00000273342 FAM19A4Q96LR4 140 aa9.58□□□□□ -0.88
COL8A1-202ENST00000273342 A0A0J9YXY3 114 aa9.57□□□□□ -0.88
COL8A1-202ENST00000273342 IGHV4-38-2P0DP08 117 aa9.57□□□□□ -0.88
COL8A1-202ENST00000273342 ADAMTSL4-AS1Q5T5F5 129 aa9.57□□□□□ -0.88
COL8A1-202ENST00000273342 C10orf99Q6UWK7 81 aa9.57□□□□□ -0.88
COL8A1-202ENST00000273342 C15orf53Q8NAA6 179 aa9.57□□□□□ -0.88
COL8A1-202ENST00000273342 DUX3Q96PT4 197 aa9.57□□□□□ -0.88
COL8A1-202ENST00000273342 TRAV8-4A0A0B4J246 113 aa9.57□□□□□ -0.88
COL8A1-202ENST00000273342 IGHV3-30-3P0DP02 117 aa9.57□□□□□ -0.88
COL8A1-202ENST00000273342 NDUFV3P56181 108 aaKnown RBP9.57□□□□□ -0.88
COL8A1-202ENST00000273342 CITED1Q99966 193 aa9.57□□□□□ -0.88
COL8A1-202ENST00000273342 KLRB1Q12918 225 aa9.56□□□□□ -0.88
COL8A1-202ENST00000273342 ATXN8Q156A1 80 aa9.56□□□□□ -0.88
COL8A1-202ENST00000273342 C2orf82Q6UX34 121 aa9.56□□□□□ -0.88
COL8A1-202ENST00000273342 CFAP46Q8IYW2 2715 aa9.56□□□□□ -0.88
COL8A1-202ENST00000273342 KLLNB2CW77 178 aa9.56□□□□□ -0.88
COL8A1-202ENST00000273342 C19orf84I3L1E1 186 aa9.56□□□□□ -0.88
COL8A1-202ENST00000273342 CD28P10747 220 aa9.56□□□□□ -0.88
COL8A1-202ENST00000273342 DAZ1Q9NQZ3 744 aaKnown RBP9.56□□□□□ -0.88
COL8A1-202ENST00000273342 IGLV4-3A0A075B6K6 122 aa9.56□□□□□ -0.88
COL8A1-202ENST00000273342 MED14OSP0DP75 135 aa9.56□□□□□ -0.88
COL8A1-202ENST00000273342 MAPK1IP1LQ8NDC0 245 aa9.56□□□□□ -0.88
COL8A1-202ENST00000273342 FBXL19-AS1Q494R0 122 aa9.55□□□□□ -0.88
COL8A1-202ENST00000273342 C20orf203Q8NBC4 194 aa9.55□□□□□ -0.88
COL8A1-202ENST00000273342 TIMM21Q9BVV7 248 aa9.55□□□□□ -0.88
COL8A1-202ENST00000273342 IGHV3-16A0A0C4DH30 117 aa9.55□□□□□ -0.88
COL8A1-202ENST00000273342 NRGNQ92686 78 aa9.55□□□□□ -0.88
COL8A1-202ENST00000273342 ZNF625Q96I27 306 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms