RNA–Protein interactions for RNA: ENST00000273048.2

RETREG2-201, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 1 (best)

Gene RETREG2, Length 2,533 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-201ENST00000273048 C9orf85Q96MD7 179 aa17.63■□□□□ 0.41
RETREG2-201ENST00000273048 Q8N1Y9 231 aa17.62■□□□□ 0.41
RETREG2-201ENST00000273048 MUSTN1Q8IVN3 82 aa17.62■□□□□ 0.41
RETREG2-201ENST00000273048 IGHV4-61A0A0C4DH41 118 aa17.61■□□□□ 0.41
RETREG2-201ENST00000273048 C9JAW5 83 aa17.61■□□□□ 0.41
RETREG2-201ENST00000273048 LEPROTO15243 131 aa17.61■□□□□ 0.41
RETREG2-201ENST00000273048 IGHV3-33P01772 117 aa17.61■□□□□ 0.41
RETREG2-201ENST00000273048 TMEM95Q3KNT9 176 aa17.61■□□□□ 0.41
RETREG2-201ENST00000273048 SORL1Q92673 2214 aa17.61■□□□□ 0.41
RETREG2-201ENST00000273048 CRYBG3Q68DQ2 2970 aa17.61■□□□□ 0.41
RETREG2-201ENST00000273048 SLC25A20O43772 301 aa17.61■□□□□ 0.41
RETREG2-201ENST00000273048 ZNF22P17026 224 aaPredicted RBP17.61■□□□□ 0.41
RETREG2-201ENST00000273048 TMEM263Q8WUH6 116 aaKnown RBP17.61■□□□□ 0.41
RETREG2-201ENST00000273048 A0A0J9YXV3 536 aa17.6■□□□□ 0.41
RETREG2-201ENST00000273048 A6NDX4 124 aa17.6■□□□□ 0.41
RETREG2-201ENST00000273048 IGLV1-40P01703 118 aa17.6■□□□□ 0.41
RETREG2-201ENST00000273048 NSUN5P1Q3KNT7 163 aa17.6■□□□□ 0.41
RETREG2-201ENST00000273048 BRI3O95415 125 aa17.59■□□□□ 0.41
RETREG2-201ENST00000273048 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.59■□□□□ 0.414e-8■■■■■ 31.7
RETREG2-201ENST00000273048 RHODO00212 210 aa17.59■□□□□ 0.41
RETREG2-201ENST00000273048 ELANEP08246 267 aa17.59■□□□□ 0.41
RETREG2-201ENST00000273048 ERG28Q9UKR5 140 aa17.58■□□□□ 0.41
RETREG2-201ENST00000273048 ADARB2-AS1A8MUL3 147 aa17.58■□□□□ 0.4
RETREG2-201ENST00000273048 SPINK13Q1W4C9 94 aa17.58■□□□□ 0.4
RETREG2-201ENST00000273048 C20orf203Q8NBC4 194 aa17.58■□□□□ 0.4
RETREG2-201ENST00000273048 RHOHQ15669 191 aa17.57■□□□□ 0.4
RETREG2-201ENST00000273048 GNLYP22749 145 aa17.57■□□□□ 0.4
RETREG2-201ENST00000273048 IGLV4-3A0A075B6K6 122 aa17.56■□□□□ 0.4
RETREG2-201ENST00000273048 Q1RN00 199 aa17.55■□□□□ 0.4
RETREG2-201ENST00000273048 A0A0J9YX75 114 aa17.55■□□□□ 0.4
RETREG2-201ENST00000273048 C10orf99Q6UWK7 81 aa17.55■□□□□ 0.4
RETREG2-201ENST00000273048 VCX2Q9H322 139 aa17.55■□□□□ 0.4
RETREG2-201ENST00000273048 CELSR2Q9HCU4 2923 aa17.54■□□□□ 0.4
RETREG2-201ENST00000273048 K7EMT4 169 aa17.54■□□□□ 0.4
RETREG2-201ENST00000273048 BEX4Q9NWD9 120 aaPredicted RBP17.54■□□□□ 0.4
RETREG2-201ENST00000273048 IGHV1OR15-1A0A075B7D0 117 aa17.54■□□□□ 0.4
RETREG2-201ENST00000273048 SPXQ9BT56 116 aa17.54■□□□□ 0.4
RETREG2-201ENST00000273048 A0A0B4J2C4 111 aa17.53■□□□□ 0.4
RETREG2-201ENST00000273048 I3L3M4 83 aa17.53■□□□□ 0.4
RETREG2-201ENST00000273048 CFHR3Q02985 330 aa17.53■□□□□ 0.4
RETREG2-201ENST00000273048 SPG11Q96JI7 2443 aa17.53■□□□□ 0.4
RETREG2-201ENST00000273048 RNF183Q96D59 192 aa17.53■□□□□ 0.4
RETREG2-201ENST00000273048 CSPG4Q6UVK1 2322 aa17.52■□□□□ 0.4
RETREG2-201ENST00000273048 A0A0J9YXY3 114 aa17.52■□□□□ 0.4
RETREG2-201ENST00000273048 IGHV3-73A0A0B4J1V6 119 aa17.52■□□□□ 0.39
RETREG2-201ENST00000273048 M0R2P5 195 aa17.52■□□□□ 0.39
RETREG2-201ENST00000273048 CSMD2Q7Z408 3487 aa17.52■□□□□ 0.39
RETREG2-201ENST00000273048 DOPEY2Q9Y3R5 2298 aa17.51■□□□□ 0.39
RETREG2-201ENST00000273048 CEMP1Q6PRD7 247 aaPredicted RBP17.51■□□□□ 0.39
RETREG2-201ENST00000273048 RNASE13Q5GAN3 156 aaKnown RBP17.51■□□□□ 0.39
RETREG2-201ENST00000273048 IGHV3-30-3P0DP02 117 aa17.5■□□□□ 0.39
RETREG2-201ENST00000273048 NTN5Q8WTR8 489 aaPredicted RBP17.5■□□□□ 0.39
RETREG2-201ENST00000273048 PKD1L2Q7Z442 2459 aa17.5■□□□□ 0.39
RETREG2-201ENST00000273048 CFAP46Q8IYW2 2715 aa17.5■□□□□ 0.39
RETREG2-201ENST00000273048 TRAV8-3A0A0A6YYJ7 113 aa17.5■□□□□ 0.39
RETREG2-201ENST00000273048 GATA3P23771 443 aa17.5■□□□□ 0.39
RETREG2-201ENST00000273048 PIMREGQ9BSJ6 248 aa17.5■□□□□ 0.39
RETREG2-201ENST00000273048 SNRPD3P62318 126 aaKnown RBP17.49■□□□□ 0.39
RETREG2-201ENST00000273048 TMEM262E9PQX1 116 aa17.49■□□□□ 0.39
RETREG2-201ENST00000273048 HTN1P15515 57 aa17.49■□□□□ 0.39
RETREG2-201ENST00000273048 PROK1P58294 105 aa17.49■□□□□ 0.39
RETREG2-201ENST00000273048 FAM104AQ969W3 186 aa17.49■□□□□ 0.39
RETREG2-201ENST00000273048 ODF3Q96PU9 254 aa17.49■□□□□ 0.39
RETREG2-201ENST00000273048 PRORYQ9H606 182 aa17.49■□□□□ 0.39
RETREG2-201ENST00000273048 PRRC2AP48634 2157 aaKnown RBP17.48■□□□□ 0.39
RETREG2-201ENST00000273048 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.48■□□□□ 0.39
RETREG2-201ENST00000273048 CD28P10747 220 aa17.48■□□□□ 0.39
RETREG2-201ENST00000273048 LINC01620Q4KN68 170 aa17.47■□□□□ 0.39
RETREG2-201ENST00000273048 TRIAP1O43715 76 aa17.47■□□□□ 0.39
RETREG2-201ENST00000273048 PRSS2P07478 247 aa17.47■□□□□ 0.39
RETREG2-201ENST00000273048 LITAFQ99732 161 aa17.47■□□□□ 0.39
RETREG2-201ENST00000273048 TIMM21Q9BVV7 248 aa17.47■□□□□ 0.39
RETREG2-201ENST00000273048 K7EQG2 157 aa17.46■□□□□ 0.39
RETREG2-201ENST00000273048 ATXN8Q156A1 80 aa17.46■□□□□ 0.39
RETREG2-201ENST00000273048 ZFAND6Q6FIF0 208 aa17.46■□□□□ 0.39
RETREG2-201ENST00000273048 AVPP01185 164 aa17.46■□□□□ 0.38
RETREG2-201ENST00000273048 PSMB8P28062 276 aa17.46■□□□□ 0.38
RETREG2-201ENST00000273048 DUX5Q96PT3 197 aa17.46■□□□□ 0.38
RETREG2-201ENST00000273048 ANAPC13Q9BS18 74 aa17.46■□□□□ 0.38
RETREG2-201ENST00000273048 A8MZ25 164 aa17.45■□□□□ 0.38
RETREG2-201ENST00000273048 ADAMTSL4-AS1Q5T5F5 129 aa17.45■□□□□ 0.38
RETREG2-201ENST00000273048 TEX49A0A1B0GTD5 131 aa17.45■□□□□ 0.38
RETREG2-201ENST00000273048 NPC2P61916 151 aa17.45■□□□□ 0.38
RETREG2-201ENST00000273048 TEX29Q8N6K0 151 aa17.45■□□□□ 0.38
RETREG2-201ENST00000273048 CITED1Q99966 193 aa17.45■□□□□ 0.38
RETREG2-201ENST00000273048 Q9UF83 564 aa17.45■□□□□ 0.38
RETREG2-201ENST00000273048 UTP20O75691 2785 aaKnown RBP17.44■□□□□ 0.38
RETREG2-201ENST00000273048 M0QXV9 152 aa17.44■□□□□ 0.38
RETREG2-201ENST00000273048 C10orf105Q8TEF2 133 aa17.44■□□□□ 0.38
RETREG2-201ENST00000273048 FLNCQ14315 2725 aa17.44■□□□□ 0.38
RETREG2-201ENST00000273048 CREBBPQ92793 2442 aa17.44■□□□□ 0.38
RETREG2-201ENST00000273048 IGHV4-30-2A0A087WSY4 118 aa17.44■□□□□ 0.38
RETREG2-201ENST00000273048 PRM2P04554 102 aa17.44■□□□□ 0.38
RETREG2-201ENST00000273048 RBMY1A1P0DJD3 496 aaKnown RBP17.44■□□□□ 0.38
RETREG2-201ENST00000273048 RBMY1CP0DJD4 496 aa17.44■□□□□ 0.38
RETREG2-201ENST00000273048 RBMY1FQ15415 496 aaKnown RBP17.44■□□□□ 0.38
RETREG2-201ENST00000273048 Q6ZSV7 163 aa17.44■□□□□ 0.38
RETREG2-201ENST00000273048 PIEZO1Q92508 2521 aa17.44■□□□□ 0.38
RETREG2-201ENST00000273048 SYNJ2BPP57105 145 aa17.43■□□□□ 0.38
RETREG2-201ENST00000273048 CRLF1O75462 422 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms